rna9839, rna9839 (mRNA) Nannochloropsis gaditana

Overview
Namerna9839
Unique Namerna9839
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1486
Alignment locationKK037256.1:229495..230492 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101248g2.3072.mrna
Orig protein idgnl|cribi|Naga_101248g2.3072
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:229495..230492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101248g2gene9552Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20865.1cds9808Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9839rna9839-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9839 ID=rna9839|Name=rna9839|organism=Nannochloropsis gaditana|type=mRNA|length=1486bp
CCCCCCTCGAAGCCATCGAGGACGTGGTCGTATCCAAACGCCGGGGCCAG
TACGAGGAAGCCCTCTCGGCCGACCCTTTAGACTACGACGTCTGGTTCGA
CTACGCACGCTTGGAGGAAGGGCAGGGAGAGCTGTCGGCGGTGCGGGAAG
TATACGAACGTGCCATCGCCAACCTCCCACCCGTGCCCGAGAAACGGTTC
TGGCGCCGTTACATCTACCTGTGGATCAACTACGCTCTCTTTGAAGAGCT
GCAGGCGGGAGAAGTGGAGAGAGCCCGGGAGGTGTACAAGGCGTGTCTCC
GGGTCATTCCCCATAAAGTCTTCACCTTTGCGAAGATTTGGGTCCTGGCA
GCTCACTTGGAGGTGGGTTTTCTTCCTCCCCCTCCCCCTTCCCGACCTCC
TTCCCGTCCACCCTCCCGCTCTTCTTCCCACATTCACTTGTCAAAGCTGC
ATTGAGAAACACCTTGGATGGAGAAAGGCCGTGTTATCATCAGCAGGCCA
TTTTTTCAAATTTTCAAATTTCAAAATTTTCAAATGTAACGCGTGGCTTA
CCCCGCGTCTCGCCTACCCCCGAACAGGTTCGTTGCAAGGACCTAGGTGC
AGCGCGGAAGCTTATGGGCCAAGCGATCGGTCGATGTCCCGAGAAGGAAT
CCTTGTTCAAGGCCTATATACAGCTGGAACTGCAATTGGGGGAGGTCGAA
CGATGTCGCACCCTCTACGCCAAGTACCTGGAGGCGTGGCCGAGCAGTTG
CCAGGCGTGGATGGACATGGCGGGTTTGGAGATTGGTGTGGGGGAAAGGG
AGCGCGGGCGGGCGGTGCTGGAGTTGGCGATCAACCAGCCGGCCTTGGAC
ATGCCAGAGCGGCTCTGGAAGTACTACATCGATTTTGAAATCGAGGGGGA
GGACGGATGGGAGGACCGGGGGGAGGAAGGGCGAGGGGAAGGGCGGGAGG
AAGGGCGGGTCCGGGCCCTGTACGAGCGTTTATTGGAACGGACGAAGCAC
GTGAAAGTATGGATCAGCTACGCCACGTACGAGGGAGGGAGAGAGGGCGG
GATGGAGGGTGCACGGGCCGTCTTCGAGCGTGGGTACGCGCATTTGAAGG
CCCAGGAGCTCAAGGAGGAAAGGTTGTTGCTTCTGGAGGCTTGGAGGGCG
CTGGAGAAGGAGCAAGGGGACCGGGCGAGCCTCGCGGCGGTGGAGGCAAA
GGTGCCGCAGCGACTGAAGAAGAAGAGGATGGTGGTGGGCGAGGACGGGA
GGGAGGAAGGGTGGGAGGAATACTACGACTACGCCTTCCCAGACGACGAG
GTGCGGCCGTCGGGGCTGGCGATCTTGCAGAAAGCACAGGCTTGGAAGGA
CGCTTTGGCGAAGGCAAAGGCGGGAGGGTCTCAACAGGAGGGGGATGCGG
GGACCAAAGGAGGGGCGGGTAAGCGGAAGAGGGAGGGAGAGGAAGGGGAG
GAGGGGGAGGAAGAGGGGGAGGACAGGGGAAGCTGA
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protein sequence of rna9839

>rna9839-protein ID=rna9839-protein|Name=rna9839|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MGWTLGGRGRRRVRSKHGEEEGGREGGREDGTLFSLLLEDPSLPGLPLTE
VAVNRPYALYLRGMSPSGVVRLQLLLRGRDQEGEQIGRQGEVRRLGSVKM
DGWGNGREDGEEIIFIREGEQPREKIEGNNGRIVVVLPDFGEAFALQAVD
TVTGTVGFSPLLMATSGGTRRSYGTMEF
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mRNA from alignment at KK037256.1:229495..230492-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9839 ID=rna9839|Name=rna9839|organism=Nannochloropsis gaditana|type=mRNA|length=998bp|location=Sequence derived from alignment at KK037256.1:229495..230492- (Nannochloropsis gaditana)
ATGGGGTGGACTCTGGGGGGACGAGGCCGGCGGCGCGTCCGCAGCAAGCA
CGGGGAGGAAGAGGGAGGGAGGGAAGGCGGGAGGGAGGACGGGACCCTGT
TCTCTCTCCTTTTGGAGGACCCTTCCCTCCCGGGTCTGCCTCTGACGGAA
GTGGCTGTGAATCGACCGTACGCCTTGTATTTACGGGGCATGTCTCCTTC
AGGGGTGGTGAGGCTTCAGCTTCTCCTGCGCGGAAGGGACCAGGAAGGGG
AGCAGATCGGGAGACAGGGCGAGGTGCGAAGGCTGGGGTCGGTCAAGATG
GATGGATGGGGGAACGGTAGGGAAGACGGGGAGGAGATAATCTTCATCAG
GGAGGGAGAACAACCCCGAGAAAAAATAGAGGGAAACAATGGCAGGATCG
TGGTGGTCTTGCCGGACTTCGGCGAGGCGTTTGCCCTCCAAGCTGTGGAT
ACGGTCACGGGTACAGTAGGATTTTCGCCCTTGCTCATGGCAACGTCGGG
AGGAACCCGGCGCTCGTATGGGACCATGGAGTTTTGAATGGGTGTCCTGC
CCGGACGTCTGGGCTCACGAATGACGCGGGCACCTATTCCCTCTGCAAGG
ACGGAGGCTGGAGCGATGCGATGGAAGGGCCACCTGGAAAGGAAGGAACA
TGGGCGAAGCAGAGAGACCGCGCCGGCCGTGCCTTGGCAAGACTGTGGGA
GGGGCAGGGCAAGGCTGGGTTTGTCAAAGGCGTGTTGCGAGGGTCCACAT
TTGGCTTCACGCCGACGCCCTCGCTCTCTGTGTCCGTGGGCCCGATACGC
GAGAAAAAGCCCCGCCACAGGCGTGAAAGCGGAAGCTTCGCCTTTGTCGC
AGGGAGGACGCGTTTTCTGGCTTTGCTTCCCCGATAGGATCCCGATAGGA
GCGCGGGCAACACCGTACGCGACAGCATTGGGTGTCAGATGATGTCCCTC
GTTTCAACGTTAATCTTTGCAAATTATGACGCTTGACACTGAGTGCCA
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Coding sequence (CDS) from alignment at KK037256.1:229495..230492-

>rna9839 ID=rna9839|Name=rna9839|organism=Nannochloropsis gaditana|type=CDS|length=537bp|location=Sequence derived from alignment at KK037256.1:229495..230492- (Nannochloropsis gaditana)
ATGGGGTGGACTCTGGGGGGACGAGGCCGGCGGCGCGTCCGCAGCAAGCA
CGGGGAGGAAGAGGGAGGGAGGGAAGGCGGGAGGGAGGACGGGACCCTGT
TCTCTCTCCTTTTGGAGGACCCTTCCCTCCCGGGTCTGCCTCTGACGGAA
GTGGCTGTGAATCGACCGTACGCCTTGTATTTACGGGGCATGTCTCCTTC
AGGGGTGGTGAGGCTTCAGCTTCTCCTGCGCGGAAGGGACCAGGAAGGGG
AGCAGATCGGGAGACAGGGCGAGGTGCGAAGGCTGGGGTCGGTCAAGATG
GATGGATGGGGGAACGGTAGGGAAGACGGGGAGGAGATAATCTTCATCAG
GGAGGGAGAACAACCCCGAGAAAAAATAGAGGGAAACAATGGCAGGATCG
TGGTGGTCTTGCCGGACTTCGGCGAGGCGTTTGCCCTCCAAGCTGTGGAT
ACGGTCACGGGTACAGTAGGATTTTCGCCCTTGCTCATGGCAACGTCGGG
AGGAACCCGGCGCTCGTATGGGACCATGGAGTTTTGA
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Synonyms
Publications