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Properties
| Property Name | Value |
|---|
| Product | tpr repeat-containing protein |
| Orig transcript id | gnl|cribi|Naga_100894g2.5984.mrna |
| Orig protein id | gnl|cribi|Naga_100894g2.5984 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:224050..226088 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9836 ID=rna9836|Name=rna9836|organism=Nannochloropsis gaditana|type=mRNA|length=1571bp
ATCTGATGCCTTGTAATGTCGCTTCCACGCCCCGTAAAAGCGACTGCAGG
TATGCGTCAATCATGCGGAAGGTATGCATGCGGGCGGTGTAGTCTGTTTT
GATCGCCTGTCCTGCGAATCATCAGTCGATCTACCAGTAAGACAGAACTA
TGCGGGTCTGTCGTCGCTGTCCTCTTGTTCCTTTGGTTGAAAATTATGAT
TCTCTCTCTTCAGTATTTCTATTTTTCATCGTATTTATCCAACAACATTG
TCAGGTACTCAAGATCAGCTCCTGATGCTGTGAATCACGCATTTCATCTC
CTTCTGATGCTCTGGATGACTGTTCAGAGCTTCGAGAGCAACCTCCCTTC
TCTGTTCAATGCTTTTTTTCGTCGATTTATTTGCCCACCATCATCCTCCA
TTCACTCATCACTTAGGTCTTGCATCATCTTTTAAATTCATATTCGAAAA
GTTGATTTACTAGGTACCCGAAATAATCACAGGGCCCTCAAAAGTCGGAA
GGCTTCGTACTTCTTCCACGTTATCCAGCTGCCTTGCTACCTTCTGCGGC
ACCCCATAGCGCCATGCCCCACCTTCCCAGCCGTCATTTCCTCTTTGCCC
TCCTTTTCCCGCTGGTGGTCCATTCTTTCAAGTACCAGATCGATGAGCGC
TACGCAGAAACAGCCAAGTGGTCGTACACAGAAACCTATATGTACGGGTC
AGGACAAGGCCCCTTGGCATGGAACAACGGGGATGCCTCCGTCCACCTCA
ACCTCTCCCTCAGGCTCTCCACCCTGACGGAGGAGGACTACGTGAACGTC
TCCGTGCTATTTTACCACCAGAAGGAGGCAGGCAAGGAGGGTGGGGCCGA
GGCAGGGACAGAGGGAGGGGTGGATTACGTGCCAGATTCCGATTTGTGCG
CCTTGGAGTTTCCGCCAGGTGCCTCGGATCGTGCGATGCACACCGTTATG
GCCCACAAGGTGGAGGCGGCGCCGGGGGAGGGGCCGGCCAGCACGGAGTG
GGCAGCGCGGGTGGAAGCCGATTACAAGGTCTTGGAGAGCGGGGTGCAGA
ATGTGCTGTTTCAGATCTGTCCCCCCCTGGTGTCCGTGAGCGAGGTTGGG
TTGGCCGGGGAGTTGAGCTTCCGGAACCCGTACGGCTTCCTCCCCGGCCG
GTTTTACGGCTACCTCCCCTTCGAGGGGGCGAGGTTCTTCGCGTTCCTCG
TCTTCTTTTTGGTCTATTTGGGTCTCGTGTGCAAGCACCGGGGCCATTTG
TTGCGCTTGCACTACGCGATATTGAGCGTCTTGGTGATCGCCACGGCCGA
GTCCTTGTCGTGGTTTTTGGCTTTTTCCCACATGAACACACGAGGCACGC
CCTATTGTTGTCCCTTCCCAGCCGTGGTGGTCTCGGCGATGGTGTTTGAA
CTGGTTCAAAAAACCGTTTCTCGGGCATTGCTCCTGTTGATCTGCCTCGG
CTACGGAATCGCCCGTCCTAGCTTGCATAAGGGGGAATGGCTCTCCCTCT
TGACCCTCTCCCTCCTCTACCTGGGCGCGACCATGCTGGACGAAGCGAGC
GAGATCGCCGAGGCCCCATAA back to topprotein sequence of rna9836 >rna9836-protein ID=rna9836-protein|Name=rna9836|organism=Nannochloropsis gaditana|type=polypeptide|length=482bp
MARALAAISRSSPSPPVSAVAVAARSAKRRRRKGDMLSYLRGLSWMHLAG
IVGLASVILGVRHFVRQVDVAEALIQNADDAYQRGNALFQRGQKEKARAA
YERAVRLFPKHVYAWSNLGTVRRELGDLQGSLAAHQEVEREGGREGRKEG
GRGPGGLLFNGNTSKRISHSHDFILPGDLWSRDLVSPPLSLLRSLFPSLP
PSFPPSFPQALELLPSPRYHYNVAVSHQSLADNPAAIASYRTAISLNPDG
LPDAYFNLGVALQEEGDLQEASRAYLRAYAIDPSNAGAMGNHCNILQSVE
GREGGGSEQAGEDVGEGGEEAGVGRVEGCYLRLIRAHPEYDRAYVNLGGY
YYTQGEMEKSAAWYMKALEHNPKNAIAAHALGALGGEKLEGASLAYLAEL
FDSYSATFDASLHALEYKSPELLRRAVDGLLQGEGEAGKVGWEGEEGQGR
SRRRAVGTGGRGGGGSLERNVCGEQNGRCPVW back to topmRNA from alignment at KK037256.1:224050..226088- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9836 ID=rna9836|Name=rna9836|organism=Nannochloropsis gaditana|type=mRNA|length=2039bp|location=Sequence derived from alignment at KK037256.1:224050..226088- (Nannochloropsis gaditana)
CGGAAAATATATGTACCAACAACGCGAACTTACCATTAACGTACGTCTAC
CACATACAATATCGCATGGAATAAAGAAGCTGACCAGTTTGCGGATCCCA
TCCCTCCCGGTATTGTCGTCGAGGCCTCTCCTTCTCGCCTTCTCTTCCTC
CTTCAACCTCCCCGTCTGGAGTTGCCCATGGCTCGCGCTCTCGCAGCTAT
CTCCAGGTCATCACCCTCCCCTCCCGTATCAGCAGTAGCGGTAGCTGCGA
GATCGGCGAAACGCAGACGGAGAAAGGGGGACATGCTATCCTATTTGCGT
GGACTGTCGTGGATGCACTTGGCCGGGATCGTCGGGTTGGCCTCTGTGAT
TTTGGGCGTCCGGCATTTCGTAAGGTGCGCGAACGCCGTGTCCTTCTGGT
AGCATGCCACACTCCCTCCTGACGGCCCTCTCTATTCTGTCTGCAGGCAA
GTGGATGTCGCTGAAGCCCTGATCCAGAACGCCGACGACGCTTACCAGCG
TGGCAACGCGCTCTTCCAACGGGGACAAAAAGAGAAAGCCAGGGCCGCGT
ACGAACGGGCCGTGCGCCTCTTTCCCAAGCATGTCTACGCTTGGAGCAAT
CTCGGCACTGTCCGGCGAGAGCTGGGGGACTTGCAGGGCTCCTTGGCGGC
CCATCAAGAGGTTGAGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGGGAG
GGAGGGGACCAGGCGGTCTTTTATTCAATGGAAATACCTCCAAACGTATC
TCACACTCTCACGATTTCATTCTCCCGGGGGACCTGTGGTCGCGGGATCT
TGTTTCCCCCCCTCTTTCTCTCCTTCGCTCCCTCTTCCCTTCCCTCCCTC
CTTCTTTCCCTCCCTCTTTCCCTCAGGCCCTCGAACTCCTCCCCAGCCCT
CGCTACCATTACAACGTGGCCGTGTCCCACCAAAGCCTCGCAGACAATCC
GGCGGCCATCGCCTCGTACCGCACCGCCATCTCCTTGAACCCCGACGGCC
TCCCCGACGCCTACTTCAACCTGGGCGTGGCCCTTCAAGAGGAAGGCGAT
TTGCAGGTCTTTGCCCCTCCATGCGTCTGAGCAACCCCCTTTCATGGCCC
CTACTTTCAATTCCAAAAATGTACATACCTTATCGATGCACTATGAAATT
CTCACTGGAGGAAGGCGATGTGCGAGGTCCCGATCTCCACCCAGCCTGGG
CATCCTCCTCCTTTGCCCCCTCTCTCAATTTGACAAACCCAGTGCCCTGC
TTCTCGGGCGTGCCCCCCCAAAGAACTGACGCTTCCTGCTTTCCCCTCTT
TTGGGGCCTGTCTCTCTCCCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCC
TCCTTCCCTCCCACCTGCTTCCCTCCTTCCCTCCCACCCGCCCTCAGGAA
GCCAGCAGGGCCTACCTGCGGGCCTATGCCATCGATCCGTCCAACGCCGG
GGCCATGGGCAACCACTGCAACATCCTCCAGAGCGTGGAGGGAAGGGAGG
GCGGAGGGAGCGAACAGGCGGGGGAGGATGTAGGGGAGGGCGGGGAGGAG
GCAGGGGTGGGGCGGGTGGAAGGATGTTACCTGCGTTTGATCCGGGCCCA
CCCCGAGTACGACCGTGCCTATGTAAACCTGGGCGGGTACTATTACACGC
AAGGGGAGATGGAGAAATCCGCCGCTTGGTACATGAAGGCCTTGGAACAC
AACCCGAAGAACGCGATCGCCGCGCACGCCCTCGGGGCCTTGGGGGGGGA
GAAGTTGGAGGGGGCGTCTCTGGCTTACTTGGCGGAGCTCTTCGACTCGT
ACTCGGCCACATTCGACGCTTCCTTGCACGCTTTGGAGTATAAGAGCCCC
GAGCTGCTCCGGCGGGCCGTGGACGGACTCTTGCAAGGGGAGGGCGAGGC
TGGAAAGGTAGGGTGGGAAGGGGAGGAGGGACAAGGTAGGAGCCGACGGA
GGGCGGTGGGGACGGGGGGAAGGGGAGGGGGGGGGTCTCTTGAGCGGAAT
GTGTGCGGCGAACAGAACGGGCGGTGCCCTGTGTGGTGA back to topCoding sequence (CDS) from alignment at KK037256.1:224050..226088- >rna9836 ID=rna9836|Name=rna9836|organism=Nannochloropsis gaditana|type=CDS|length=4347bp|location=Sequence derived from alignment at KK037256.1:224050..226088- (Nannochloropsis gaditana)
GAAGCCAGCAGGGCCTACCTGCGGGCCTATGCCATCGATCCGTCCAACGC
CGGGGCCATGGGCAACCACTGCAACATCCTCCAGAGCGTGGAGGGAAGGG
AGGGCGGAGGGAGCGAACAGGCGGGGGAGGATGTAGGGGAGGGCGGGGAG
GAGGCAGGGGTGGGGCGGGTGGAAGGATGTTACCTGCGTTTGATCCGGGC
CCACCCCGAGTACGACCGTGCCTATGTAAACCTGGGCGGGTACTATTACA
CGCAAGGGGAGATGGAGAAATCCGCCGCTTGGTACATGAAGGCCTTGGAA
CACAACCCGAAGAACGCGATCGCCGCGCACGCCCTCGGGGCCTTGGGGGG
GGAGAAGTTGGAGGGGGCGTCTCTGGCTTACTTGGCGGAGCTCTTCGACT
CGTACTCGGCCACATTCGACGCTTCCTTGCACGCTTTGGAGTATAAGAGC
CCCGAGCTGCTCCGGCGGGCCGTGGACGGACTCTTGCAAGGGGAGGGCGA
GGCTGGAAAGGTAGGGTGGGAAGGGGAGGAGGGACAAGGTAGGAGCCGAC
GGAGGGCGGTGGGGACGGGGGGAAGGGGAGGGGGGGGGTCTCTTGAGCGG
AATGTGTGCGGCGAACAGAACGGGCGGTGCCCTGTGTGGTGAGCAAGTGG
ATGTCGCTGAAGCCCTGATCCAGAACGCCGACGACGCTTACCAGCGTGGC
AACGCGCTCTTCCAACGGGGACAAAAAGAGAAAGCCAGGGCCGCGTACGA
ACGGGCCGTGCGCCTCTTTCCCAAGCATGTCTACGCTTGGAGCAATCTCG
GCACTGTCCGGCGAGAGCTGGGGGACTTGCAGGGCTCCTTGGCGGCCCAT
CAAGAGGTTGAGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGGGAGGGAG
GGGACCAGGCGGTCTTTTATTCAATGGAAATACCTCCAAACGTATCTCAC
ACTCTCACGATTTCATTCTCCCGGGGGACCTGTGGTCGCGGGATCTTGTT
TCCCCCCCTCTTTCTCTCCTTCGCTCCCTCTTCCCTTCCCTCCCTCCTTC
TTTCCCTCCCTCTTTCCCTCAGGCCCTCGAACTCCTCCCCAGCCCTCGCT
ACCATTACAACGTGGCCGTGTCCCACCAAAGCCTCGCAGACAATCCGGCG
GCCATCGCCTCGTACCGCACCGCCATCTCCTTGAACCCCGACGGCCTCCC
CGACGCCTACTTCAACCTGGGCGTGGCCCTTCAAGAGGAAGGCGATTTGC
AGATGGCTCGCGCTCTCGCAGCTATCTCCAGGTCATCACCCTCCCCTCCC
GTATCAGCAGTAGCGGTAGCTGCGAGATCGGCGAAACGCAGACGGAGAAA
GGGGGACATGCTATCCTATTTGCGTGGACTGTCGTGGATGCACTTGGCCG
GGATCGTCGGGTTGGCCTCTGTGATTTTGGGCGTCCGGCATTTCGTAAGG
AAGCCAGCAGGGCCTACCTGCGGGCCTATGCCATCGATCCGTCCAACGCC
GGGGCCATGGGCAACCACTGCAACATCCTCCAGAGCGTGGAGGGAAGGGA
GGGCGGAGGGAGCGAACAGGCGGGGGAGGATGTAGGGGAGGGCGGGGAGG
AGGCAGGGGTGGGGCGGGTGGAAGGATGTTACCTGCGTTTGATCCGGGCC
CACCCCGAGTACGACCGTGCCTATGTAAACCTGGGCGGGTACTATTACAC
GCAAGGGGAGATGGAGAAATCCGCCGCTTGGTACATGAAGGCCTTGGAAC
ACAACCCGAAGAACGCGATCGCCGCGCACGCCCTCGGGGCCTTGGGGGGG
GAGAAGTTGGAGGGGGCGTCTCTGGCTTACTTGGCGGAGCTCTTCGACTC
GTACTCGGCCACATTCGACGCTTCCTTGCACGCTTTGGAGTATAAGAGCC
CCGAGCTGCTCCGGCGGGCCGTGGACGGACTCTTGCAAGGGGAGGGCGAG
GCTGGAAAGGTAGGGTGGGAAGGGGAGGAGGGACAAGGTAGGAGCCGACG
GAGGGCGGTGGGGACGGGGGGAAGGGGAGGGGGGGGGTCTCTTGAGCGGA
ATGTGTGCGGCGAACAGAACGGGCGGTGCCCTGTGTGGTGAGCAAGTGGA
TGTCGCTGAAGCCCTGATCCAGAACGCCGACGACGCTTACCAGCGTGGCA
ACGCGCTCTTCCAACGGGGACAAAAAGAGAAAGCCAGGGCCGCGTACGAA
CGGGCCGTGCGCCTCTTTCCCAAGCATGTCTACGCTTGGAGCAATCTCGG
CACTGTCCGGCGAGAGCTGGGGGACTTGCAGGGCTCCTTGGCGGCCCATC
AAGAGGTTGAGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGGGAGGGAGG
GGACCAGGCGGTCTTTTATTCAATGGAAATACCTCCAAACGTATCTCACA
CTCTCACGATTTCATTCTCCCGGGGGACCTGTGGTCGCGGGATCTTGTTT
CCCCCCCTCTTTCTCTCCTTCGCTCCCTCTTCCCTTCCCTCCCTCCTTCT
TTCCCTCCCTCTTTCCCTCAGGCCCTCGAACTCCTCCCCAGCCCTCGCTA
CCATTACAACGTGGCCGTGTCCCACCAAAGCCTCGCAGACAATCCGGCGG
CCATCGCCTCGTACCGCACCGCCATCTCCTTGAACCCCGACGGCCTCCCC
GACGCCTACTTCAACCTGGGCGTGGCCCTTCAAGAGGAAGGCGATTTGCA
GATGGCTCGCGCTCTCGCAGCTATCTCCAGGTCATCACCCTCCCCTCCCG
TATCAGCAGTAGCGGTAGCTGCGAGATCGGCGAAACGCAGACGGAGAAAG
GGGGACATGCTATCCTATTTGCGTGGACTGTCGTGGATGCACTTGGCCGG
GATCGTCGGGTTGGCCTCTGTGATTTTGGGCGTCCGGCATTTCGTAAGGA
AGCCAGCAGGGCCTACCTGCGGGCCTATGCCATCGATCCGTCCAACGCCG
GGGCCATGGGCAACCACTGCAACATCCTCCAGAGCGTGGAGGGAAGGGAG
GGCGGAGGGAGCGAACAGGCGGGGGAGGATGTAGGGGAGGGCGGGGAGGA
GGCAGGGGTGGGGCGGGTGGAAGGATGTTACCTGCGTTTGATCCGGGCCC
ACCCCGAGTACGACCGTGCCTATGTAAACCTGGGCGGGTACTATTACACG
CAAGGGGAGATGGAGAAATCCGCCGCTTGGTACATGAAGGCCTTGGAACA
CAACCCGAAGAACGCGATCGCCGCGCACGCCCTCGGGGCCTTGGGGGGGG
AGAAGTTGGAGGGGGCGTCTCTGGCTTACTTGGCGGAGCTCTTCGACTCG
TACTCGGCCACATTCGACGCTTCCTTGCACGCTTTGGAGTATAAGAGCCC
CGAGCTGCTCCGGCGGGCCGTGGACGGACTCTTGCAAGGGGAGGGCGAGG
CTGGAAAGGTAGGGTGGGAAGGGGAGGAGGGACAAGGTAGGAGCCGACGG
AGGGCGGTGGGGACGGGGGGAAGGGGAGGGGGGGGGTCTCTTGAGCGGAA
TGTGTGCGGCGAACAGAACGGGCGGTGCCCTGTGTGGTGAGCAAGTGGAT
GTCGCTGAAGCCCTGATCCAGAACGCCGACGACGCTTACCAGCGTGGCAA
CGCGCTCTTCCAACGGGGACAAAAAGAGAAAGCCAGGGCCGCGTACGAAC
GGGCCGTGCGCCTCTTTCCCAAGCATGTCTACGCTTGGAGCAATCTCGGC
ACTGTCCGGCGAGAGCTGGGGGACTTGCAGGGCTCCTTGGCGGCCCATCA
AGAGGTTGAGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGGGAGGGAGGG
GACCAGGCGGTCTTTTATTCAATGGAAATACCTCCAAACGTATCTCACAC
TCTCACGATTTCATTCTCCCGGGGGACCTGTGGTCGCGGGATCTTGTTTC
CCCCCCTCTTTCTCTCCTTCGCTCCCTCTTCCCTTCCCTCCCTCCTTCTT
TCCCTCCCTCTTTCCCTCAGGCCCTCGAACTCCTCCCCAGCCCTCGCTAC
CATTACAACGTGGCCGTGTCCCACCAAAGCCTCGCAGACAATCCGGCGGC
CATCGCCTCGTACCGCACCGCCATCTCCTTGAACCCCGACGGCCTCCCCG
ACGCCTACTTCAACCTGGGCGTGGCCCTTCAAGAGGAAGGCGATTTGCAG
ATGGCTCGCGCTCTCGCAGCTATCTCCAGGTCATCACCCTCCCCTCCCGT
ATCAGCAGTAGCGGTAGCTGCGAGATCGGCGAAACGCAGACGGAGAAAGG
GGGACATGCTATCCTATTTGCGTGGACTGTCGTGGATGCACTTGGCCGGG
ATCGTCGGGTTGGCCTCTGTGATTTTGGGCGTCCGGCATTTCGTAAG back to top
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