rna982, rna982 (mRNA) Nannochloropsis gaditana

Overview
Namerna982
Unique Namerna982
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2511
Alignment locationCM002456.1:897973..899034 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100114g10.2474.mrna
Orig protein idgnl|cribi|Naga_100114g10.2474
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:897973..899034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100114g10gene945Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29689.1cds981Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna982rna982-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna982 ID=rna982|Name=rna982|organism=Nannochloropsis gaditana|type=mRNA|length=2511bp
ATGGTGGTCCCTTCAAGCACTGCCACCGCGGCCGTCCTTGTCCTTGCTAT
CGCAGTAGCTTTAGTAATAGAGCCACCGGTGTTTTTGCGGCGTTGGTGGC
TTGAGTGGGGTTTGTCTCTGGAGGTTTCTACTGAGTGTCAAACGACGGAA
CACTACGCTGTGGGCACTGGCTTCGACGTTTTCTGGGATAAAGGTGCCCT
CAGCGTCTTGAGCTCCTCACTGCCGCAATCCTCGTCGTCGGCATCACCGA
ACAACACATTGTGGCATTCATATGCCCGCGAGAAACCTTTTATTCTTGCT
GCGCGGGCTGTGCTAAAGCACGATCCTATCCAGGACGGACACTACTTCCT
CAATCAAGGCATTCGCGGACAAACCACCCGGCAAACTGTGGAATCCCTCC
TTTACGAGCCCAACGTCTCGTTGACCCTACTTGGTACGCTGGATAGGCCG
GGGGGGCCTTCAATCCCGTACCGTTTCACTTTATCAGCGGACAAGGCTTG
CACTGACGGCAAGCTGCATTTTGCTATACTCCTGGGAGAGACGGATGAAA
GCCAAGACGATGATAGCGACGACGAAATAGTCTACGCGGGTAAAGATGGG
CCTATTCCCTCCAACAAAGCGGCCTACTACAACCGGGTCTGGCTTCGGTA
CGGGTCTGACAAGGAGGAGGCTTTCTTTGGTTTTGGACAGCACTACTCCC
GATGGAACTTGAAGGGGCACCTGGTCCCCGTGATCATCAGCGAGCAGGGG
GTTGGCCGGGGCCTTCAGCCCGCGACCTTCGCGCTGAATACGTTCCTCCA
CGGCGTAGGCTCCGCCTGGCACACGACCTACGTGGCCAAGCCCATGTACC
TGACAAGCCGCGGACGGGCTCTCTCTCTGGTCGGTCCCAAAGTCTCCTTC
TTCGATCTGACGCTGCCGGACATTGTCACGGCTGAATACTGGTCATGCAG
GAGCATGCGGGGAATTCTGTACAGTGCGGCCTCGCCGCTTGAGACCGTGG
CGCTTCTGAGCACGGAGACGGGCCGAATGCAACCGCTTCCCGCCTGGACT
CAGCGAGGGGTGGTGGTGGGGCTGGAGGGGGGCTCGGAGGAGGTCGAGCG
TATTACGGCGAGGCTCGAGGCGCACCAGGTCCCCTTAGTCGCTGTTTGGC
TGCAAGACTGGGTGGGCACCAGGCAGGACTGGGACGGGACGCGGCTGATC
TGGAATTGGGAGGTGAACAGGGGCTACTACCCTCGCTGGGACTCCTTCCG
GCAGCGGCTGGAGGCCTCGGGGGGAGTCAAAGTCTTGACCTACATCAACC
CCTTCCTGGTGGACGTGGCAGCCGCTAACAAGTCCTTTCCCCACACCCGG
AACTTGTTCGCCGAGGCGGTGGAGCATGGGCATCTGATCAAAGACGCGGC
GGGGCAGCCCTTGCTGGCGAAGAGCGGCAGCATCGAATTCGGCACCATCG
ACGCCAGCAGCCCAGAGACGCGGGCCTGGTTCAAGACTGTGATCAAGACG
GCTATGATAGAGGGCGCAGGGGCGGGGGGTTGGATGGCGGATTTCGGAGA
GTACGTCCCCTTCAATGCCCGGTTACACGGTGGGAGAGGGAACGCGATGC
ACAACGCCTTCCCCGACTACTGGGCCTCCTTGCAGCGCGAGGCGATCGCG
GAGGCGGGCGGCGAGGCTGCAGAGGAAGTGGTGGCCTTTGTGCGGTCCGG
CTATATGAAGACGCCGGGGTTCGCGCAGCTGTACTGGGTGGGGGACCAGC
TGGTCACGTGGGACGGGCACGACGGCATCAAGACGGTGCTGCCGGCCATG
CTGTCGGGGGGGCTGGTCGGCCACAGCCTGACTCACTCAGACGTGGGCGG
GTACACAATGATCGATCATCCTGTGCTCAAGTTCTTCCGCCCCCGCGAAC
TCTTGTTCCGGTGGGTGGAGCTGGGCGCCTTCGCCGGGGTCCTCTTCCGC
ACTCACCTGGGAAGCTTCATGCATACCCCCAGCGCGCAGGTCTGGGACGA
CGCAGAGACGATGGCTCACTTTGCTCGCTTTGGTCGAATCTTCGCCCATC
TAGCGCCTTACCGCAGCGTCCTGATGGAGGAGGCGGCCAGCAAGGGCTAC
CCAGTGGTCAGGCCTCTCTTCCTCCACTACCCCGGGGACGCCAGCGCCTA
CCGGATCAGCCAGCAGTTCCTCCTGGGGCCCGACCTTCTGGTCGCTCCCG
TCCTAAACCCTGGGCAGGAGACGTTGCGCCTGTACCTGCCGGGGGGGGAT
CGGTGGCGGCACGTGTGGACGGGGCACATTTACGAAGGAGGATGGCTCAC
GGTCTCTGCCCCCATGGGCGAGATCCCGGTCTTCAGCCGCCAAGGCACGC
CTTTTGCGGAGCTCTTCGACAGCCTTAAAGAGGGAGGTTGTGAGATAATG
TGGGAAAATACGAGCATCGGAGAAGAAAGTCGTGTTATATGCTTTCCGTC
TCGATGCGATCTCTGTTTGTCCGTAGTAAGGCACGAGATAAAACCTGTAA
AATCTGTATGA
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protein sequence of rna982

>rna982-protein ID=rna982-protein|Name=rna982|organism=Nannochloropsis gaditana|type=polypeptide|length=290bp
MGTTLVDERGLPISASIEPHQGQHVAVVLRFLRARGTEGACLLGPQECGK
SSLAFQLCYTMAQQDPNRQAIFIHRHRDSRHVVKTTRLVVASSRPSSSPA
VEPHHQSEQTGPSCVGRAKGWDFSVLDNVFLKRFTSFQGLCWYFGSLHNQ
PDALLPSVIVVDDLDRYISTTNRDDDSLSAYCQVLSVIRDAAEHIRQRTG
HHCSLVVTMEQASRGLLLPLIRQLGMVLRISGDQNHKGGESMAIWKLEED
KESRNGDTVGGEGAVSCYCCRYDATEKGVLRVLEMSEEKQ
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mRNA from alignment at CM002456.1:897973..899034-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna982 ID=rna982|Name=rna982|organism=Nannochloropsis gaditana|type=mRNA|length=1062bp|location=Sequence derived from alignment at CM002456.1:897973..899034- (Nannochloropsis gaditana)
TACCTGAACCGACTTTCTTAATGCATCTCTCACAGCTGTGTGTAGATCTA
GGTGATCCTATCCCCATTGTGGTCGCGTGATATGGGTACGACATTGGTGG
ATGAGCGCGGTTTGCCGATTAGCGCTTCTATCGAGCCCCATCAAGGCCAG
CATGTCGCAGTCGTACTCCGGTTCCTGAGAGCTCGAGGTACAGAGGGCGC
TTGCCTCTTGGGACCTCAGGAATGCGGAAAGAGCTCTCTAGCCTTCCAGC
TATGCTATACGATGGCGCAGCAGGATCCAAATCGACAGGCGATTTTCATT
CACCGGCATCGCGATTCACGCCACGTTGTCAAAACAACGCGACTCGTAGT
CGCTTCTTCTAGGCCTTCGTCAAGCCCGGCTGTTGAGCCACACCACCAAA
GCGAACAGACAGGGCCCAGCTGTGTAGGTCGAGCGAAGGGATGGGATTTT
TCTGTGCTGGATAATGTCTTCCTGAAGCGCTTCACGAGCTTCCAGGGTCT
CTGCTGGTACTTCGGAAGCCTTCATAACCAGCCAGACGCTTTATTGCCCT
CCGTGATTGTGGTGGACGATCTGGACCGCTACATAAGCACCACGAATCGA
GACGACGACTCGCTGAGCGCCTATTGTCAGGTCCTGAGTGTGATACGCGA
TGCAGCCGAGCACATCAGGCAGCGGACTGGACATCATTGCTCGCTGGTCG
TGACCATGGAGCAGGCAAGCCGGGGCCTTTTGCTTCCTCTGATCCGGCAG
TTGGGCATGGTCTTACGCATCAGTGGGGACCAAAATCACAAAGGCGGAGA
ATCAATGGCGATATGGAAGTTAGAAGAGGACAAGGAATCCCGGAATGGGG
ACACAGTGGGGGGAGAGGGAGCTGTCTCATGTTATTGTTGTCGTTATGAC
GCGACCGAGAAGGGGGTCCTCCGTGTGTTAGAGATGTCTGAGGAAAAACA
ATAACATACGTAAGACACTCTGCTTGCACACTGTCATACAGATTTTACAG
GTTTTATCTCGTGCCTTACTACGGACAAACAGAGATCGCATCGAGACGGA
AAGCATATAACA
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Coding sequence (CDS) from alignment at CM002456.1:897973..899034-

>rna982 ID=rna982|Name=rna982|organism=Nannochloropsis gaditana|type=CDS|length=873bp|location=Sequence derived from alignment at CM002456.1:897973..899034- (Nannochloropsis gaditana)
ATGGGTACGACATTGGTGGATGAGCGCGGTTTGCCGATTAGCGCTTCTAT
CGAGCCCCATCAAGGCCAGCATGTCGCAGTCGTACTCCGGTTCCTGAGAG
CTCGAGGTACAGAGGGCGCTTGCCTCTTGGGACCTCAGGAATGCGGAAAG
AGCTCTCTAGCCTTCCAGCTATGCTATACGATGGCGCAGCAGGATCCAAA
TCGACAGGCGATTTTCATTCACCGGCATCGCGATTCACGCCACGTTGTCA
AAACAACGCGACTCGTAGTCGCTTCTTCTAGGCCTTCGTCAAGCCCGGCT
GTTGAGCCACACCACCAAAGCGAACAGACAGGGCCCAGCTGTGTAGGTCG
AGCGAAGGGATGGGATTTTTCTGTGCTGGATAATGTCTTCCTGAAGCGCT
TCACGAGCTTCCAGGGTCTCTGCTGGTACTTCGGAAGCCTTCATAACCAG
CCAGACGCTTTATTGCCCTCCGTGATTGTGGTGGACGATCTGGACCGCTA
CATAAGCACCACGAATCGAGACGACGACTCGCTGAGCGCCTATTGTCAGG
TCCTGAGTGTGATACGCGATGCAGCCGAGCACATCAGGCAGCGGACTGGA
CATCATTGCTCGCTGGTCGTGACCATGGAGCAGGCAAGCCGGGGCCTTTT
GCTTCCTCTGATCCGGCAGTTGGGCATGGTCTTACGCATCAGTGGGGACC
AAAATCACAAAGGCGGAGAATCAATGGCGATATGGAAGTTAGAAGAGGAC
AAGGAATCCCGGAATGGGGACACAGTGGGGGGAGAGGGAGCTGTCTCATG
TTATTGTTGTCGTTATGACGCGACCGAGAAGGGGGTCCTCCGTGTGTTAG
AGATGTCTGAGGAAAAACAATAA
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Synonyms
Publications