rna9812, rna9812 (mRNA) Nannochloropsis gaditana

Overview
Namerna9812
Unique Namerna9812
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length285
Alignment locationKK037256.1:165915..167284 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100201g5.6915.mrna
Orig protein idgnl|cribi|Naga_100201g5.6915
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:165915..167284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100201g5gene9527Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9812rna9812-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20890.1cds9781Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9812 ID=rna9812|Name=rna9812|organism=Nannochloropsis gaditana|type=mRNA|length=285bp
ATGTTCTTTTCCATCGTCATGTACCATTTCATCACGAGAGAGGGTAGAAG
ATGGTGTCAAAGTAAAGTAACGGACTCGGAGAGCGCCAGGGAAGCAGCCA
AGGAAATACAGGGAGTGTTGCGAGAGAGAGGGAGCAAATATCTGTGTGTT
TCGGTCTCCGTAAGAGGGCGTGATGAGGCAACAAGGGAACATTGTTCACG
AAGAAAGAGGAAAGCCCACTATTTGGCGCGAATAACGACAATTACCGGCC
AAAGCACAGAGATACGGCACGTCCAGGCATCATGA
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protein sequence of rna9812

>rna9812-protein ID=rna9812-protein|Name=rna9812|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MPRPKNTPKRDAQALVQVSERPKSEEAVSDDEWVPPPLPAKATGASQKPH
KQVKMGTTASPSSLVYTEPPPGMESECSFENVKVTATKPSSATAPSGWRT
ALKKEKEGLIDKKKAKTTIEWGSSGDSFNADDLAVEYVMGAGDGGTGMRG
LGVSMHEQLMTCARLGAAETAGRAVDIAWSNPGGAEAGVEVGKEGRRRPT
LIVTMEFNGKSFRDQGPLYSMHEMARVFAGVLQKQSTKRRKATIEHSSVK
LEEVARRSPPFFWSLFHHNHADVRKGLAKAKITCILVNTFESDIKTDTDG
AGGQVPRAL
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mRNA from alignment at KK037256.1:165915..167284-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9812 ID=rna9812|Name=rna9812|organism=Nannochloropsis gaditana|type=mRNA|length=1370bp|location=Sequence derived from alignment at KK037256.1:165915..167284- (Nannochloropsis gaditana)
ATGCCGCGTCCAAAAAATACGCCTAAACGTGACGCACAAGCCCTTGTTCA
AGTGAGTGAGAGACCGAAAAGTGAAGAGGCTGTGAGCGACGACGAGTGGG
TGCCGCCTCCCTTGCCCGCAAAGGCAACAGGAGCAAGCCAGAAGCCGCAC
AAGCAAGTCAAGATGGGCACAACCGCATCGCCTTCATCACTGGTGTACAC
AGAGCCACCACCAGGAATGGAGTCGGAATGCAGCTTTGAGAACGTCAAAG
TTACCGCGACAAAGCCGTCTAGCGCGACAGCACCGTCTGGGTGGAGGACA
GCGTTAAAAAAGGAAAAAGAGGGCCTTATCGACAAGAAAAAGGCCAAGAC
AACCATTGAGTGGGGTAGCTCTGGAGACTCCTTTAATGCGGACGATTTGG
CCGTGGAGTACGTGATGGGAGCCGGAGATGGCGGGACAGGCATGAGAGGT
TTGGGTGTCAGCATGCACGAACAGCTGATGACTTGCGCGCGCCTGGGAGC
CGCGGAAACAGCAGGGAGGGCTGTCGACATAGCCTGGTCCAATCCAGGAG
GGGCGGAGGCAGGGGTAGAGGTAGGGAAGGAGGGAAGGAGACGACCGACG
CTAATTGTGACGATGGAATTCAACGGGAAATCTTTCCGAGACCAGGGGCC
TCTGTACAGCATGCACGAAATGGCCCGGGTCTTCGCGGGCGTGCTGCAAA
AGCAATCGACGAAAAGACGGTGAGTAGCGGGAGAGAGGGGGGGGGGGGGA
GAGGGGGAGCCCTGGGGTTTGCAGGCGGGTGGGGCTCCATAGCCTCCGGT
ACCACAGTGCCTCACCTTTCTCCTCCACCGTCCTTCCCCTCCTTGCCCCT
CGTGATTGTCTTCCCCACTCACACCGACTTTTGCGTTAAACTTGGCCGCT
GACTTCTCCTCCCTTTTCCCTCACTATCCCCTCTCTCCACCCTCCTCAGC
AAAGCCACCATCGAGCACTCATCAGTCAAGCTAGAGGAGGTTGCCAGACG
CAGTCCACCTTTTTTCTGGTCCCTTTTCCATCACAACCACGCCGACGTCC
GCAAAGGACTTGCGAAGGTGCTGCAGGAGGCGGAGGCCTGGGGGGAGGGC
GGGACGGAGGAAGGGGGGGATTGAGGAAGGGGGGATGCTGGATGGGGTGG
GGAGAGGAAGGCGAGTGGGGCGGAGTGTGCTAAACGGGGTGAATTAGATG
AAGGGTGGAAGATGAGGGGTTCTGGTGGTTGATATGAAAAGCCGCGTGTG
CAGTGGAGATGAAGGCGGTAGACAAAGGCCAAGATCACGTGTATCCTTGT
GAATACATTCGAAAGTGACATCAAGACGGATACGGATGGAGCAGGCGGAC
AGGTGCCCCGCGCACTGTAA
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Coding sequence (CDS) from alignment at KK037256.1:165915..167284-

>rna9812 ID=rna9812|Name=rna9812|organism=Nannochloropsis gaditana|type=CDS|length=2790bp|location=Sequence derived from alignment at KK037256.1:165915..167284- (Nannochloropsis gaditana)
GCCAAGATCACGTGTATCCTTGTGAATACATTCGAAAGTGACATCAAGAC
GGATACGGATGGAGCAGGCGGACAGGTGCCCCGCGCACTGTAACAAAGCC
ACCATCGAGCACTCATCAGTCAAGCTAGAGGAGGTTGCCAGACGCAGTCC
ACCTTTTTTCTGGTCCCTTTTCCATCACAACCACGCCGACGTCCGCAAAG
GACTTGCGAAGATGCCGCGTCCAAAAAATACGCCTAAACGTGACGCACAA
GCCCTTGTTCAAGTGAGTGAGAGACCGAAAAGTGAAGAGGCTGTGAGCGA
CGACGAGTGGGTGCCGCCTCCCTTGCCCGCAAAGGCAACAGGAGCAAGCC
AGAAGCCGCACAAGCAAGTCAAGATGGGCACAACCGCATCGCCTTCATCA
CTGGTGTACACAGAGCCACCACCAGGAATGGAGTCGGAATGCAGCTTTGA
GAACGTCAAAGTTACCGCGACAAAGCCGTCTAGCGCGACAGCACCGTCTG
GGTGGAGGACAGCGTTAAAAAAGGAAAAAGAGGGCCTTATCGACAAGAAA
AAGGCCAAGACAACCATTGAGTGGGGTAGCTCTGGAGACTCCTTTAATGC
GGACGATTTGGCCGTGGAGTACGTGATGGGAGCCGGAGATGGCGGGACAG
GCATGAGAGGTTTGGGTGTCAGCATGCACGAACAGCTGATGACTTGCGCG
CGCCTGGGAGCCGCGGAAACAGCAGGGAGGGCTGTCGACATAGCCTGGTC
CAATCCAGGAGGGGCGGAGGCAGGGGTAGAGGTAGGGAAGGAGGGAAGGA
GACGACCGACGCTAATTGTGACGATGGAATTCAACGGGAAATCTTTCCGA
GACCAGGGGCCTCTGTACAGCATGCACGAAATGGCCCGGGTCTTCGCGGG
CGTGCTGCAAAAGCAATCGACGAAAAGACGGCCAAGATCACGTGTATCCT
TGTGAATACATTCGAAAGTGACATCAAGACGGATACGGATGGAGCAGGCG
GACAGGTGCCCCGCGCACTGTAACAAAGCCACCATCGAGCACTCATCAGT
CAAGCTAGAGGAGGTTGCCAGACGCAGTCCACCTTTTTTCTGGTCCCTTT
TCCATCACAACCACGCCGACGTCCGCAAAGGACTTGCGAAGATGCCGCGT
CCAAAAAATACGCCTAAACGTGACGCACAAGCCCTTGTTCAAGTGAGTGA
GAGACCGAAAAGTGAAGAGGCTGTGAGCGACGACGAGTGGGTGCCGCCTC
CCTTGCCCGCAAAGGCAACAGGAGCAAGCCAGAAGCCGCACAAGCAAGTC
AAGATGGGCACAACCGCATCGCCTTCATCACTGGTGTACACAGAGCCACC
ACCAGGAATGGAGTCGGAATGCAGCTTTGAGAACGTCAAAGTTACCGCGA
CAAAGCCGTCTAGCGCGACAGCACCGTCTGGGTGGAGGACAGCGTTAAAA
AAGGAAAAAGAGGGCCTTATCGACAAGAAAAAGGCCAAGACAACCATTGA
GTGGGGTAGCTCTGGAGACTCCTTTAATGCGGACGATTTGGCCGTGGAGT
ACGTGATGGGAGCCGGAGATGGCGGGACAGGCATGAGAGGTTTGGGTGTC
AGCATGCACGAACAGCTGATGACTTGCGCGCGCCTGGGAGCCGCGGAAAC
AGCAGGGAGGGCTGTCGACATAGCCTGGTCCAATCCAGGAGGGGCGGAGG
CAGGGGTAGAGGTAGGGAAGGAGGGAAGGAGACGACCGACGCTAATTGTG
ACGATGGAATTCAACGGGAAATCTTTCCGAGACCAGGGGCCTCTGTACAG
CATGCACGAAATGGCCCGGGTCTTCGCGGGCGTGCTGCAAAAGCAATCGA
CGAAAAGACGGCCAAGATCACGTGTATCCTTGTGAATACATTCGAAAGTG
ACATCAAGACGGATACGGATGGAGCAGGCGGACAGGTGCCCCGCGCACTG
TAACAAAGCCACCATCGAGCACTCATCAGTCAAGCTAGAGGAGGTTGCCA
GACGCAGTCCACCTTTTTTCTGGTCCCTTTTCCATCACAACCACGCCGAC
GTCCGCAAAGGACTTGCGAAGATGCCGCGTCCAAAAAATACGCCTAAACG
TGACGCACAAGCCCTTGTTCAAGTGAGTGAGAGACCGAAAAGTGAAGAGG
CTGTGAGCGACGACGAGTGGGTGCCGCCTCCCTTGCCCGCAAAGGCAACA
GGAGCAAGCCAGAAGCCGCACAAGCAAGTCAAGATGGGCACAACCGCATC
GCCTTCATCACTGGTGTACACAGAGCCACCACCAGGAATGGAGTCGGAAT
GCAGCTTTGAGAACGTCAAAGTTACCGCGACAAAGCCGTCTAGCGCGACA
GCACCGTCTGGGTGGAGGACAGCGTTAAAAAAGGAAAAAGAGGGCCTTAT
CGACAAGAAAAAGGCCAAGACAACCATTGAGTGGGGTAGCTCTGGAGACT
CCTTTAATGCGGACGATTTGGCCGTGGAGTACGTGATGGGAGCCGGAGAT
GGCGGGACAGGCATGAGAGGTTTGGGTGTCAGCATGCACGAACAGCTGAT
GACTTGCGCGCGCCTGGGAGCCGCGGAAACAGCAGGGAGGGCTGTCGACA
TAGCCTGGTCCAATCCAGGAGGGGCGGAGGCAGGGGTAGAGGTAGGGAAG
GAGGGAAGGAGACGACCGACGCTAATTGTGACGATGGAATTCAACGGGAA
ATCTTTCCGAGACCAGGGGCCTCTGTACAGCATGCACGAAATGGCCCGGG
TCTTCGCGGGCGTGCTGCAAAAGCAATCGACGAAAAGACG
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Synonyms
Publications