rna9809, rna9809 (mRNA) Nannochloropsis gaditana

Overview
Namerna9809
Unique Namerna9809
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length892
Alignment locationKK037256.1:161404..163530 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100201g1.6907.mrna
Orig protein idgnl|cribi|Naga_100201g1.6907
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:161404..163530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100201g1gene9524Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9809rna9809-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20882.1cds9778Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9809 ID=rna9809|Name=rna9809|organism=Nannochloropsis gaditana|type=mRNA|length=892bp
GGAGTAGGCGGGTGTGCATCTTCATTGCTTAAAGTCGTGGAGGCTGCATT
AGTCTTACAACGATTTTGCTGTCTCATGTGTGTGACAGGGAGCCTCGATT
CCACCTGGACTTCTGCTTTTCTCCCCCTCCCTCCGCTCCCCTCACGTTCC
CTGCCACCGTCCCTGTACTGCACAGGACCTTCCCACCATACGGTCAGGCT
TTAAATGACCACCACTGAGGGCGAAGGCAGTGCTGTGGCACCGGCACCCT
CAAAAACCGCTTCGACGGCGACTTCCACCTCCTCATCCTCCTCCCCGGCC
CCCTCTGCCACCGCTGTCAAGCCGCGTGTATTCACCTCCCGGAACTTGAA
CCCCACTTTGCAAGCTGTCGCGTCGAAATCCGAAGCCCAAGCCCCCCGAG
TGGCCTTGCCAGGATCCACGTCGCGTCTGACAGTGATCAACAAACCGTTT
CCCAGTCCGGAGGAGCCAGGGCCGGGACCGGGGGAAAATGGAGAGCGCGG
GAAAGGCGGAGGGTTTCGAGGAAGGCCCAGCAGTTGGGTCGACGCGTCCC
TGGCGGCGTCCAGGGCCAGCCTGGGGGCTCCTGTGGGAGGGGGATGGAGG
GGGAAGGAGGGGGGGCGGACGGAGGCCAGGGGCGGGGGTACGGAGGCGAG
GGAGGCAGGCTCCCAAGGGCGTTTGTTCCCGCTGCCAGGACCCGGGCCCG
CCTCTACGGACGGCGAGGGGCCCAGGCAGGCGGACGAAGGCCCGCTGGCG
AACTATCGGTCGCCGCAGTCCAAAGGAGATGGCCCTTCCTCCCTCCCTCC
CTCCCTCCCTTCCTCCCTCCCTCCCTACGACCCCTCCTCCTCCCGTGCCG
GGCAGGGCAAGTCGGGGCCGCCTGTGGAAAGAAGGACCCTGC
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protein sequence of rna9809

>rna9809-protein ID=rna9809-protein|Name=rna9809|organism=Nannochloropsis gaditana|type=polypeptide|length=456bp
MAGARVQILHKPAGNGHPRSGNGHQRSDLNPARRGPADDGTGRSPPSAEH
ERGGQEERTLPLSVPFPAGGEDSEGGGGREVGRGVRGGARGRGRGRGGGG
GSGREGSGPALLQRLGPSPPRSRPVEAGLGRGREGGRGGGRGRGFQLGQA
RLRPSLPPSTPEDEDALPAIHPAESPSSPSLPRSRSPAGEREVVEVTLRG
RAGRKQAGGRDGRGKRNGKDAREEGERQPPRPREGPAEEEEAKGREGEEG
AGGRRLQRGRRPQGAREELGPGMARGRGGGGRGLRRESSPAQEKAEAGLS
AQAPSRRVEDARRGAALSPPRLLHRDREGKLATKRPPKNNQRVVTIHYTQ
EATAPPTALPDPAPAPPSPLVIRVSLADVLATAAKAKARRAAVEAPHAAR
SAPAAAEATAGVGVDATKTATPDVDMGHGQGSNPPAVTVSVSELLAASGK
LTPSSL
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mRNA from alignment at KK037256.1:161404..163530+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9809 ID=rna9809|Name=rna9809|organism=Nannochloropsis gaditana|type=mRNA|length=2127bp|location=Sequence derived from alignment at KK037256.1:161404..163530+ (Nannochloropsis gaditana)
ATGGCTGGGGCCCGCGTGCAAATCTTGCACAAACCGGCGGGTAACGGCCA
CCCACGGTCGGGTAATGGCCACCAACGGTCGGACCTCAACCCTGCCAGGC
GCGGCCCCGCCGATGACGGCACAGGCCGcagccccccctccgccgagcAC
GAAAGGGgtgggcaggaggaaaggactcttcctctctctgtgCCCTTTcc
ggcgggcggggaagactcggagggaggagggggcagggaagtAGGAAGAG
GCGtccgaggaggggcgcgagggcggggccgagggcgaggagggggggga
ggaagcggtcgGGAGGGCAGCGGCCCTGCCTTGTTGCAGCGACTGggccc
ttcacctcctcgatCCAGGCCCGTGGAGGCAGGGctggggcgagggaggg
agggaggacgtggtggaggacgaggtcgtgGCTTTCAGCTAGGACAGGCA
CGCCtacgtccctccctccctccttcgacccctgaggacgaggacgcgct
CCCAGCTATCCACCCCGCTgagtccccctcctctccctccctccctcgct
cgcgCTCACccgcgggggaaagggaggtggtggaggtgacgctgagaggg
agggcaggcaggaaacaggcgggggggcgggacgggagagggaagcggaA
TGGGAaagacgcgagggaggagggggagaggcagcCACCTCGACCTCGGG
AAGGGCCcgctgaagaagaggaggccaaggggagggagggcgaggaaggg
gcgggggggcgacgcCTGCAGAGAGGTCGACGGCCtcagggggcgaggga
ggagttgGGGCCGGGGATGGCAcggggccgagggggaggaggacggggcc
tCCGTCGGGAGTCTTCGCcggcgcaggagaaggcggaagcAGGATTATCG
GCACAAGCTCCGTCCCGCCGGGTAGAGGACGCGAGGCGAGGGGCGGCACT
ATCCCCCCCGCGGCTTTTGCAccgggaccgggaggggaagctTGCCACCA
AGCGCCCTCCCAAGAACAACCAGCGGGTGGTGACCATCCACTACACTCAA
GAGGCTACCGCCCCACCCACGGCGCTACCGGATCCTGCgccggcccctcc
ttcgcccctgGTCATCCGGGTATCTTTGGCCGATGTCTTGGCGACTgcgg
ccaaggccaaggCGCGCAGGGCGGCTGTCGAGGCCCCTCATGCAGCGCGT
TCAGCTCCTGCAGCTGCCGAGGCGACTGCTGGTGTGGGTGTAGATGCCAC
GAAGACGGCAACGCCGGATGTGGATATGGGCCACGGGCAGGGTTCGAATC
CCCCCGCAGTGACAGTGAGCGTCAGTGAGCTTTTAGCGGCCTCCGGGAAA
CtcacgccgtcctccctgtgAGGACTGGTAGGTATCCATGCCTCGCGCGG
ATTCCGGCAGTCCTGTATACGTCTTTTCATGCACCGTCATGAAGGTCCAG
GGGgccaagggcgggcgggggagggacgggggctTCTGAGGGGTGGGCTA
AATAGGGACGACATCGATCTGTTTGGATCGCCCGGGTACCGGCATCTTTT
GGAAACAGCGCGCGGACTCGATGAGCTGCGGTAGGCACcgaccctcctct
tcatgccGGTCAGGCGTCTCGCAGGTGCGATTGTCGTCGCCATGGCCGGG
GCGGGTGGAGAAGGGTGTGTGTGTGGCCTGGAAGAAGCGCAGGAGGATAC
CCTGACCTTGGAGTGGCGGGAGATTGCCTGGCTGGCAGGGATTGAGGGCT
GTGGTGAGCCTGCGAGGGGAAATAGAAAGAGGTGGGGGATGCTTAGGAGG
AAGGCTGAGCCTTGACGCGGTTCGATTTGAGAATgatggggagaaaaggg
agggaggagggcctttGCGGTTCGGAAGATGGGTGTTcttggagggtgga
agggggggggtatcAAAcaagggggcgaggagggaaggaaagtgtCTGTT
GGAGGGACATagcgagaaagagaaggttgaaaggaggaagagcactGAGC
ACCCGAAACGGGCGGCGGGGTAATGGggtggcaaggaagagggaagggat
cgcttaaagggaaggagggtgagatcgtggggcgggaggctgtGCACTGA
ACATCGAAACTAATGTAACCGACAAAG
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Coding sequence (CDS) from alignment at KK037256.1:161404..163530+

>rna9809 ID=rna9809|Name=rna9809|organism=Nannochloropsis gaditana|type=CDS|length=1371bp|location=Sequence derived from alignment at KK037256.1:161404..163530+ (Nannochloropsis gaditana)
ATGGCTGGGGCCCGCGTGCAAATCTTGCACAAACCGGCGGGTAACGGCCA
CCCACGGTCGGGTAATGGCCACCAACGGTCGGACCTCAACCCTGCCAGGC
GCGGCCCCGCCGATGACGGCACAGGCCGcagccccccctccgccgagcAC
GAAAGGGgtgggcaggaggaaaggactcttcctctctctgtgCCCTTTcc
ggcgggcggggaagactcggagggaggagggggcagggaagtAGGAAGAG
GCGtccgaggaggggcgcgagggcggggccgagggcgaggagggggggga
ggaagcggtcgGGAGGGCAGCGGCCCTGCCTTGTTGCAGCGACTGggccc
ttcacctcctcgatCCAGGCCCGTGGAGGCAGGGctggggcgagggaggg
agggaggacgtggtggaggacgaggtcgtgGCTTTCAGCTAGGACAGGCA
CGCCtacgtccctccctccctccttcgacccctgaggacgaggacgcgct
CCCAGCTATCCACCCCGCTgagtccccctcctctccctccctccctcgct
cgcgCTCACccgcgggggaaagggaggtggtggaggtgacgctgagaggg
agggcaggcaggaaacaggcgggggggcgggacgggagagggaagcggaA
TGGGAaagacgcgagggaggagggggagaggcagcCACCTCGACCTCGGG
AAGGGCCcgctgaagaagaggaggccaaggggagggagggcgaggaaggg
gcgggggggcgacgcCTGCAGAGAGGTCGACGGCCtcagggggcgaggga
ggagttgGGGCCGGGGATGGCAcggggccgagggggaggaggacggggcc
tCCGTCGGGAGTCTTCGCcggcgcaggagaaggcggaagcAGGATTATCG
GCACAAGCTCCGTCCCGCCGGGTAGAGGACGCGAGGCGAGGGGCGGCACT
ATCCCCCCCGCGGCTTTTGCAccgggaccgggaggggaagctTGCCACCA
AGCGCCCTCCCAAGAACAACCAGCGGGTGGTGACCATCCACTACACTCAA
GAGGCTACCGCCCCACCCACGGCGCTACCGGATCCTGCgccggcccctcc
ttcgcccctgGTCATCCGGGTATCTTTGGCCGATGTCTTGGCGACTgcgg
ccaaggccaaggCGCGCAGGGCGGCTGTCGAGGCCCCTCATGCAGCGCGT
TCAGCTCCTGCAGCTGCCGAGGCGACTGCTGGTGTGGGTGTAGATGCCAC
GAAGACGGCAACGCCGGATGTGGATATGGGCCACGGGCAGGGTTCGAATC
CCCCCGCAGTGACAGTGAGCGTCAGTGAGCTTTTAGCGGCCTCCGGGAAA
CtcacgccgtcctccctgtgA
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Synonyms
Publications