rna9807, rna9807 (mRNA) Nannochloropsis gaditana

Overview
Namerna9807
Unique Namerna9807
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length718
Alignment locationKK037256.1:158025..159426 -

Link to JBrowse

Properties
Property NameValue
Productinositol monophosphatase
Orig transcript idgnl|cribi|Naga_101411g2.2363.mrna
Orig protein idgnl|cribi|Naga_101411g2.2363
GeneIMPA1
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:158025..159426 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IMPA1gene9522Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9807rna9807-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20896.1cds9776Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9807 ID=rna9807|Name=rna9807|organism=Nannochloropsis gaditana|type=mRNA|length=718bp
CCCTCCCTCCCTCGCCCAGGTCTCCATCGGTCTGCTCATCCGGAAGCGCC
CCGTCGTCGGCGTCGTCTACAATCCTTTCCTGCAAGAGCTCTACACCGCC
CGGCATGGGGGGGGCGCCTTCTTGAACGGCAAACCCCTCCACGTCAGCGC
CACCCCCACCCTGAAAGAGGCGATGGTTGCCACCACCTTAGGAGCATCCC
GGGACCGGACCTACCTGAACCTCCTCCTCTTCCGGCTTCGCGCCCTTTTG
CTGGAACGCCTCCAGGCTTTCCGAGTCTCGGGCTCTACCTGTCAGAATCT
GGCCCATGTTGCCTCCGGGCGGCTCGACTGCTACTACGACGAGGGCGGCT
TCGGAGGGCCCTGGGACATTGCGGCGGGCCTGGTCTTGGTAAGAGAGGCG
GGGGGGACGGTGCGGGCCCTGGGGGGGGGCGACTTTGTCTTCTCCATGGG
CCAGGGGAACCTGGTGTGTGGGAACGCGCACTTGGTGGAGGAGGTCGTGC
AAGCGGTGCGGGCCGCCGACAACAAAATGTGGTGGAAGGGGGTGAGGGTG
CAGGTGAGAGGGTGGGGGAGCATCGGGGCGGTGGTGCTCGGGGCTTGCGT
CATCTCCTTGGTTTTGGGGGGCAGGAAAGCGCGTTAAGGAGGGAAGGAGG
ATGGGAGGGAGGGGAGGAGGGGAGGAGAGAGGAGGTTCGTGGTTCGTGCA
TAAGAGGGTATACATAGA
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protein sequence of rna9807

>rna9807-protein ID=rna9807-protein|Name=rna9807|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MICPYYVVFSIVPVRGFFRYGALTSLLSSPLESAPSFLRPTKSLMPWSRR
PPFSPTDHVGISMSTIKDDGDTMPHPLSSQENFAASTNPSDDEFRDHDLD
HYLQVAESAALQAGNFIRASLERRTSLGLTVNDKAAVGAARVDLVTEVDL
QAEEIIIPSIRKAVTGRHIFVGEESAFLTGTQALTDDPHWFVDPVDGTTN
FIHGYPFVTVGRAGGRAQAASWGWEGGEEGV
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mRNA from alignment at KK037256.1:158025..159426-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9807 ID=rna9807|Name=rna9807|organism=Nannochloropsis gaditana|type=mRNA|length=1402bp|location=Sequence derived from alignment at KK037256.1:158025..159426- (Nannochloropsis gaditana)
CCCCCACCTCTTTTTCCAGTGCTTGTATGCCCCCTATTTCTCGTCGGCAG
GAAGCGGCGTCCAGATCATACCAAGGACATCTTTTTTCGTGTCAAATTGG
GATTGAGTTTCTATTGACGGGACTCAAAGTGGGGACATAAGCATGGCCGG
GTACAACCATTACTCCCTCGCGTCCTAATTTACCTTTCCATATGGCCCCG
CCTTCATGCCCTGAGTAGCATGCAAAGGCATTTACTAACCGTACACGATC
TCCCCAATTGTAATACACCTCGATGAGGGTGCCTTTCTGCGTAAGTATGA
ATGATCCCGCGCTCAAAGGAAACCTGCTCTGAGTTGAAGCTCTGAGAAGG
AGCCTCTGAGAAATACCTCACTCACGAGCGAGCTGTATATACGGAATGAG
CGGAAGAAGATGCATAAATACGCATGATATGCCCTTACTACGTAGTGTTC
TCAATAGTACCAGTAAGGGGCTTCTTTCGATACGGAGCTTTGACCTCTCT
CCTGTCCTCCCCCCTGGAGTCAGCCCCCTCGTTTCTCCGTCCCACGAAGA
GCCTCATGCCGTGGTCGCGACGTCCTCCCTTTTCTCCCACCGACCATGTA
GGTATCAGCATGTCAACAATAAAAGATGACGGCGACACAATGCCTCATCC
ACTCTCCTCGCAAGAGAATTTCGCCGCGAGCACAAACCCTAGCGACGACG
AATGTAAGGCTTCCATCCTGTCCCGTATTGCGTTCCGGCGTGCGAAGCCC
GTAGTGGTAGCCCTCGGACATGTTGGCAGTCGTCGAGTGTTGCATGTCAC
CCAGGGTCAGCGTACCCACTAACGCTCGGTCTCGTTCCCTGTTCCGTAGT
CAGGGATCACGACTTGGACCATTACCTCCAGGTCGCCGAGTCGGCGGCCC
TGCAGGCGGGCAAGTGAGTACGACGGAGCGGCTTGGGACGAGGAACGTTA
TCCTACAGTGCCCGCCTTCAGAGCCATCGTGTACGTTCCCTCCCTCACCC
CCTCCCTGTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTAG
CTTCATCCGGGCATCTCTGGAGCGGCGGACAAGTCTGGGTCTGACCGTGA
ACGACAAGGCCGCAGTCGGTGCCGCCCGCGTGGATTTGGTCACGGAGGTA
GACCTGCAGGCAGAGGAGATCATCATCCCCTCCATCCGAAAGGCAGTGAC
GGGCCGGCACATCTTCGTGGGGGAGGAGTCCGCCTTTTTGACCGGGACCC
AGGCCTTGACCGACGACCCCCACTGGTTCGTCGACCCTGTGGACGGAACC
ACCAACTTCATCCATGGCTACCCTTTTGTGACGGTGGGGAGGGCGGGAGG
GAGGGCGCAGGCTGCGTCCTGGGGATGGGAGGGCGGCGAGGAGGGAGTGT
AG
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Coding sequence (CDS) from alignment at KK037256.1:158025..159426-

>rna9807 ID=rna9807|Name=rna9807|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at KK037256.1:158025..159426- (Nannochloropsis gaditana)
CTTCATCCGGGCATCTCTGGAGCGGCGGACAAGTCTGGGTCTGACCGTGA
ACGACAAGGCCGCAGTCGGTGCCGCCCGCGTGGATTTGGTCACGGAGGTA
GACCTGCAGGCAGAGGAGATCATCATCCCCTCCATCCGAAAGGCAGTGAC
GGGCCGGCACATCTTCGTGGGGGAGGAGTCCGCCTTTTTGACCGGGACCC
AGGCCTTGACCGACGACCCCCACTGGTTCGTCGACCCTGTGGACGGAACC
ACCAACTTCATCCATGGCTACCCTTTTGTGACGGTGGGGAGGGCGGGAGG
GAGGGCGCAGGCTGCGTCCTGGGGATGGGAGGGCGGCGAGGAGGGAGTGT
AGTCAGGGATCACGACTTGGACCATTACCTCCAGGTCGCCGAGTCGGCGG
CCCTGCAGGCGGGCAAATGATATGCCCTTACTACGTAGTGTTCTCAATAG
TACCAGTAAGGGGCTTCTTTCGATACGGAGCTTTGACCTCTCTCCTGTCC
TCCCCCCTGGAGTCAGCCCCCTCGTTTCTCCGTCCCACGAAGAGCCTCAT
GCCGTGGTCGCGACGTCCTCCCTTTTCTCCCACCGACCATGTAGGTATCA
GCATGTCAACAATAAAAGATGACGGCGACACAATGCCTCATCCACTCTCC
TCGCAAGAGAATTTCGCCGCGAGCACAAACCCTAGCGACGACGAATCTTC
ATCCGGGCATCTCTGGAGCGGCGGACAAGTCTGGGTCTGACCGTGAACGA
CAAGGCCGCAGTCGGTGCCGCCCGCGTGGATTTGGTCACGGAGGTAGACC
TGCAGGCAGAGGAGATCATCATCCCCTCCATCCGAAAGGCAGTGACGGGC
CGGCACATCTTCGTGGGGGAGGAGTCCGCCTTTTTGACCGGGACCCAGGC
CTTGACCGACGACCCCCACTGGTTCGTCGACCCTGTGGACGGAACCACCA
ACTTCATCCATGGCTACCCTTTTGTGACGGTGGGGAGGGCGGGAGGGAGG
GCGCAGGCTGCGTCCTGGGGATGGGAGGGCGGCGAGGAGGGAGTGTAGTC
AGGGATCACGACTTGGACCATTACCTCCAGGTCGCCGAGTCGGCGGCCCT
GCAGGCGGGCAAATGATATGCCCTTACTACGTAGTGTTCTCAATAGTACC
AGTAAGGGGCTTCTTTCGATACGGAGCTTTGACCTCTCTCCTGTCCTCCC
CCCTGGAGTCAGCCCCCTCGTTTCTCCGTCCCACGAAGAGCCTCATGCCG
TGGTCGCGACGTCCTCCCTTTTCTCCCACCGACCATGTAGGTATCAGCAT
GTCAACAATAAAAGATGACGGCGACACAATGCCTCATCCACTCTCCTCGC
AAGAGAATTTCGCCGCGAGCACAAACCCTAGCGACGACGAATCTTCATCC
GGGCATCTCTGGAGCGGCGGACAAGTCTGGGTCTGACCGTGAACGACAAG
GCCGCAGTCGGTGCCGCCCGCGTGGATTTGGTCACGGAGGTAGACCTGCA
GGCAGAGGAGATCATCATCCCCTCCATCCGAAAGGCAGTGACGGGCCGGC
ACATCTTCGTGGGGGAGGAGTCCGCCTTTTTGACCGGGACCCAGGCCTTG
ACCGACGACCCCCACTGGTTCGTCGACCCTGTGGACGGAACCACCAACTT
CATCCATGGCTACCCTTTTGTGACGGTGGGGAGGGCGGGAGGGAGGGCGC
AGGCTGCGTCCTGGGGATGGGAGGGCGGCGAGGAGGGAGTGTAGTCAGGG
ATCACGACTTGGACCATTACCTCCAGGTCGCCGAGTCGGCGGCCCTGCAG
GCGGGCAAATGATATGCCCTTACTACGTAGTGTTCTCAATAGTACCAGTA
AGGGGCTTCTTTCGATACGGAGCTTTGACCTCTCTCCTGTCCTCCCCCCT
GGAGTCAGCCCCCTCGTTTCTCCGTCCCACGAAGAGCCTCATGCCGTGGT
CGCGACGTCCTCCCTTTTCTCCCACCGACCATGTAGGTATCAGCATGTCA
ACAATAAAAGATGACGGCGACACAATGCCTCATCCACTCTCCTCGCAAGA
GAATTTCGCCGCGAGCACAAACCCTAGCGACGACGAAT
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Synonyms
Publications