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Properties
| Property Name | Value |
|---|
| Product | carrier protein |
| Orig transcript id | gnl|cribi|Naga_100061g8.8561.mrna |
| Orig protein id | gnl|cribi|Naga_100061g8.8561 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:107107..109897 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9786 ID=rna9786|Name=rna9786|organism=Nannochloropsis gaditana|type=mRNA|length=944bp
ATAAGTCTCAAATGCCGTCCAAGTTTTGGCTTACCCCGCTTTGCAAGGAC
TTCCACCGCTCTTTGTTTTGGAGGCGCATGGGGCATTTCATGTTCCACCG
GACCATGGCTACCTTGGATCGAGGCATGCTGTGTGGCGGGGAGGCTTCAT
ACTGACCAATTCTTGTCTCTATTCCCTTTGTGTCATCGTGTTTGAGTGAA
CTATTGTCAATCAATCTATTCAAAAAATCAAACCTTTTCCCCCTCCATTC
CATGCACAATATAGAGTTAACCCACAAACATGGGGAAAGGTAAACCTGCG
GGGTCCAATGCAGGGCGCAAGCTGCGAGTGCACAGACGCAATGAGAAGTG
GGCAAGCAAGAGGTGGAACAAGGCTCACTCGGTCACGCACATGAAGGCCA
ATCCCTTGGGTGGTGCTGCCATGGCCAAGGGCATCGTCCTAGAGAAGATT
GGAATCGAAGCCAAACAGCCTAACTCGGCTATTCGCAAGTGTGTGAGAGT
ACAGCTGATTAAGAATGGAAAGAAGATTGCCGCTTTCGTGCCCCGGGACG
GTTGCCTCAACTTTGTGGACGAGAATGACGAAGTGCTGATCGCTGGTTTT
GGTCGCTCTGGTCACGCCGTGGGCGACATTCCCGGTGTCCGCTTTAAAGT
CATCAAGGTCTCTGGTGTGGGGCTGCTTGCACTTTTCAAGGACAAAAAGG
AGAAGCCTCGATCGTGAAAGTTGAGACGTTCGTGGGTCTTCAATGTGACT
GGAGGAACGAGAGTTGATCATCAACCCTCATTCGACCGGTTGGAGTCTAA
GAATAAAATGTTCAAACGTGGGGGCTTGCCGTGGGACTGGTCTCTCTGAA
TGAAAGGGGCGGGTGACCGTGCAAACGCGCAAAGTTGACTATGGGAGTTC
ACTTCAGAAAGAACAAGAATAGCGGTTTTCTCCACTTGCGTTGC back to topprotein sequence of rna9786 >rna9786-protein ID=rna9786-protein|Name=rna9786|organism=Nannochloropsis gaditana|type=polypeptide|length=759bp
MSWLLHGMRHASAGRQRRRPPRQWRLCRGFILVLAFSVVSQAHVQDLLRR
RPPHPHLSWLYRKGGATNNSSVPKSVHEPLFTSSPAPSPPVSTPEAEAFP
EAPTPALLTDYPSRPRRSKARLLRDAVFPIYGREVHKFFSMGMIKFLIVF
VLTITRDVKDTLIVTSCGAESIAFLKVYGVLPAAAAFTVAYSKMSNALSK
DALYYALVAPFFLFYLLFDLVIYPRRHQLHPTATATSFQGLSYLLGLYNN
WTFALYYIVSEIYSSVSIGLLFWQFANDVITVDEAKRFYPLFGQLSSVAP
IIAGQCVARVADGGDFGGSLRILTGLTTLCGMGIMVLYHYCSRLVQKEAS
DGLLTSHMVKNLQQSRPRPQLSLQESASFLLGSQYLRYMAVLVLGFGLAI
NFTDILWKSMVKDYFPDKLAYQRFMGFYSSTVGATTFVVIFFGSNIVKHL
GWRIGALATPVMMAALAVPFFAAIFLKGFGASSKRTALLAVGAGALMSVL
SKATKYALFDPTTQMAYIPLDEESKSKGKAAIDVLGSRVGKSLGALLLQA
CVMVFGSALRASYVVGGMFYAVIFSWIFSANNLAGLFQELTERPRKYGAG
SGLASGSTDSGGGKGGAGSDSSGASTDGSGSGPTPVAAAQEVPQEVPAEV
PPSSSAPSAFLDGGLNPHIAPPPIEGREEGSEEGEEGEGGGEGEGRCGPL
EGEGEAIAIPSTEFMQSVASQGAERDMSLPRSTDPSPPSFHSSGPGTAPS
QDSSSFPAP back to topmRNA from alignment at KK037256.1:107107..109897+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9786 ID=rna9786|Name=rna9786|organism=Nannochloropsis gaditana|type=mRNA|length=2791bp|location=Sequence derived from alignment at KK037256.1:107107..109897+ (Nannochloropsis gaditana)
TAACAGGGAGTAGGAGGCCTGGGTCGTGTAGTCATTCAGCCGAGGGGACA
GAATGAGCTGGCTTTTACACGGCATGCGGCATGCCAGCGCTGGAAGGCAG
CGCCGTAGACCGCCACGCCAATGGCGGCTATGTAGGGGCTTTATTTTAGT
CTTGGCGTTCTCTGTCGTATCACAAGCACACGTACAAGACCTGTTGCGGA
GACGGCCACCACATCCACACCTTTCCTGGCTTTATCGTAAGGTAAGACAG
GACAGCTCTACATCAGGTTGCCGCATCCCGTATGAATCTCATATCATGCA
CCTCGCGTATAAACAGGGCGGCGCGACGAATAATTCGTCCGTACCCAAGT
CGGTCCACGAGCCCTTGTTTACTTCCAGTCCTgcgccatcgcctcctgtA
TCAACCCCCGAGGCAGAGGCGTTCCCCGAGGCCCCtacccctgccctcct
caccgATTACCCATCACGACCACGACGAAGCAaagcccgcctcctgcgTG
ACGCCGTCTTCCCCATTTACGGACGAGAGGTCCATAAGTTCTTTTCCATG
GGTATGATCAAGTTTTTAATAGTTTTTGTGCTCACCATCACCCGAGACGT
CAAGGACACGCTCATAGTCACCAGTTGCGGCGCAGAGTCCATTGCATTCC
TGAAGGTCTACGGTGTTTTGCCGGCAGCAGCCGCGTTTACTGTGGCCTAC
TCCAAAATGTCCAACGCGCTGAGCAAGGACGCACTCTACTACGCCTTGGT
ggcgcccttcttcctcttctacctcctcttcgaccTGGTCATCTACCCTC
GCCGGCACCAGCTCCATCCCACCGCTaccgccacgtccttccAGGGCCTG
AGCTACCTGCTGGGTCTTTATAATAACTGGACCTTTGCTCTCTACTACAT
CGTCTCGGAGATCTACTCCTCGGTCTCGATCGGACTCCTGTTCTGGCAGT
TCGCCAACGACGTGATcacggtggacgaggccaagcGCTTTTACCCGCTC
TTCGGCCAgctttcctccgtcgcccccATCATCGCCGGTCAGTGCGTGGC
CCGCGTGGCGGACGGTGGGGACTTCGGGGGGAGCCTCCGGATCCTGACGG
GCCTGACCACCCTGTGCGGGATGGGCATCATGGTCCTGTACCACTACTGC
TCCCGCCTTGTCCAGAAGGAGGCCAGCGACGGACTCCTCACGTCCCACAT
GGTCAAGAACCTGCAGCAGAGCCGGCCTCGGCCCCAGCTATCCCTTCAGG
AgagcgcctccttccttctggGCTCCCAGTACCTGCGGTACATGGCCGTG
CTCGTCCTGGGCTTCGGCCTCGCCATCAACTTCACCGACATCCTCTGGAA
ATCGATGGTCAAGGACTACTTCCCGGACAAACTCGCCTACCAACGCTTCA
TGGGCTTCTACTCCTCCACCGTGGgcgccaccaccttcgtGGTCATTTTC
TTCGGCAGTAACATCGTCAAGCACCTCGGCTGGCGCATCGGCGCCCTGGC
CACCCCCGTGATGATGGCCGCGCTGgccgtccctttcttcgccgccaTCT
TCCTCAAGGGCTTCGGGGCCAGCTCCAAGCGCACGGCCCTCTTGGCCgta
ggggcgggggcgctGATGAGCGTCCTCTCGAAAGCCACCAAATACGCGCT
CTTCGATCCCACCACCCAGATGGCCTACATCCCCCTGGACGAGGAGtcca
agagcaagggcaAGGCAGCCATCGACGTGCTCGGCTCCCGCGTCGGGAAG
TCCTTGGgggcgctcctcctccaggcctgcGTGATGGTATTCGGCTCCGC
CCTCCGGGCCTCCTACGTGGTGGGCGGGATGTTCTACGCGGTCATCTTCT
CCTGGATCTTCTCCGCCAACAATCTGGCTGGGCTCTTCCAAGAGCTCACG
GAGCGACCGCGCAAATACGGGGCAGGCAGTGGCTTGGCGAGCGGCAGCAC
GGACAgtggtggtgggaagggcggcgCGGGCAGCGACAGCAGTGGCGCCT
CCACCGACGGGTCGGGGTCGGGGCCTACGCCTGTCGCGGCCGCTCAGGAG
GTCCCTCAGGAGGTGCCTGCCGAGGTACCaccctcgtcgtccgcacCCTC
GGCGTTCTTAGACGGTGGCCTGAACCCGCACATTGCCCCACCGCCAatag
aggggagggaggaagggagcgaggaaggggaggaaggcgaaggcgggggg
gagggcgagggtcgCTGTGGGCCGTTGGAgggtgaaggggaggcgatCGC
AATTCCCAGTACTGAATTTATGCAGAGTGTAGCCTCGCAGGGAGCTGAGC
GAGACATGTCTCTACCAAGGTCGACGgatccctcgcccccctctttccac
tCCTCAGGTCCTGGCACTGCTCCATCTCAggattcctcctcctttcctgc
gcCGTAGACTCACACGTGAAAATCACTTTACACGAAAGACGGTcatgcgg
agggaagaaagcacTTCAAGCCCGGTAAAGCCAAACACCCGCACCCGCTG
TCTTGACAGTCGGGTGTTCTTGGGCATAGAAATAGGAGAGTGAGGGCCAA
TCCGTcgagaggaagtggtggcgaagggaagggtcTAAGGGAGGCGAGAA
AAACTCACATAGATCGGTAGATGACAGCAAACATGAAAATTGAATAAACT
TTGACAGGGGTGCTCATCGTGCAGAGCTTATAAGACTCGTGTTTTTTTAA
AACAACGCAGGTTTATATCATGTCGTTCGGGCCGTACGTGtactttcgcg
ccaaaaactCTTTctcacgccctcttcctccttgcgctCCT back to topCoding sequence (CDS) from alignment at KK037256.1:107107..109897+ >rna9786 ID=rna9786|Name=rna9786|organism=Nannochloropsis gaditana|type=CDS|length=4560bp|location=Sequence derived from alignment at KK037256.1:107107..109897+ (Nannochloropsis gaditana)
ATGAGCTGGCTTTTACACGGCATGCGGCATGCCAGCGCTGGAAGGCAGCG
CCGTAGACCGCCACGCCAATGGCGGCTATGTAGGGGCTTTATTTTAGTCT
TGGCGTTCTCTGTCGTATCACAAGCACACGTACAAGACCTGTTGCGGAGA
CGGCCACCACATCCACACCTTTCCTGGCTTTATCGTAAGGGCGGCGCGAC
GAATAATTCGTCCGTACCCAAGTCGGTCCACGAGCCCTTGTTTACTTCCA
GTCCTgcgccatcgcctcctgtATCAACCCCCGAGGCAGAGGCGTTCCCC
GAGGCCCCtacccctgccctcctcaccgATTACCCATCACGACCACGACG
AAGCAaagcccgcctcctgcgTGACGCCGTCTTCCCCATTTACGGACGAG
AGGTCCATAAGTTCTTTTCCATGGGTATGATCAAGTTTTTAATAGTTTTT
GTGCTCACCATCACCCGAGACGTCAAGGACACGCTCATAGTCACCAGTTG
CGGCGCAGAGTCCATTGCATTCCTGAAGGTCTACGGTGTTTTGCCGGCAG
CAGCCGCGTTTACTGTGGCCTACTCCAAAATGTCCAACGCGCTGAGCAAG
GACGCACTCTACTACGCCTTGGTggcgcccttcttcctcttctacctcct
cttcgaccTGGTCATCTACCCTCGCCGGCACCAGCTCCATCCCACCGCTa
ccgccacgtccttccAGGGCCTGAGCTACCTGCTGGGTCTTTATAATAAC
TGGACCTTTGCTCTCTACTACATCGTCTCGGAGATCTACTCCTCGGTCTC
GATCGGACTCCTGTTCTGGCAGTTCGCCAACGACGTGATcacggtggacg
aggccaagcGCTTTTACCCGCTCTTCGGCCAgctttcctccgtcgccccc
ATCATCGCCGGTCAGTGCGTGGCCCGCGTGGCGGACGGTGGGGACTTCGG
GGGGAGCCTCCGGATCCTGACGGGCCTGACCACCCTGTGCGGGATGGGCA
TCATGGTCCTGTACCACTACTGCTCCCGCCTTGTCCAGAAGGAGGCCAGC
GACGGACTCCTCACGTCCCACATGGTCAAGAACCTGCAGCAGAGCCGGCC
TCGGCCCCAGCTATCCCTTCAGGAgagcgcctccttccttctggGCTCCC
AGTACCTGCGGTACATGGCCGTGCTCGTCCTGGGCTTCGGCCTCGCCATC
AACTTCACCGACATCCTCTGGAAATCGATGGTCAAGGACTACTTCCCGGA
CAAACTCGCCTACCAACGCTTCATGGGCTTCTACTCCTCCACCGTGGgcg
ccaccaccttcgtGGTCATTTTCTTCGGCAGTAACATCGTCAAGCACCTC
GGCTGGCGCATCGGCGCCCTGGCCACCCCCGTGATGATGGCCGCGCTGgc
cgtccctttcttcgccgccaTCTTCCTCAAGGGCTTCGGGGCCAGCTCCA
AGCGCACGGCCCTCTTGGCCgtaggggcgggggcgctGATGAGCGTCCTC
TCGAAAGCCACCAAATACGCGCTCTTCGATCCCACCACCCAGATGGCCTA
CATCCCCCTGGACGAGGAGtccaagagcaagggcaAGGCAGCCATCGACG
TGCTCGGCTCCCGCGTCGGGAAGTCCTTGGgggcgctcctcctccaggcc
tgcGTGATGGTATTCGGCTCCGCCCTCCGGGCCTCCTACGTGGTGGGCGG
GATGTTCTACGCGGTCATCTTCTCCTGGATCTTCTCCGCCAACAATCTGG
CTGGGCTCTTCCAAGAGCTCACGGAGCGACCGCGCAAATACGGGGCAGGC
AGTGGCTTGGCGAGCGGCAGCACGGACAgtggtggtgggaagggcggcgC
GGGCAGCGACAGCAGTGGCGCCTCCACCGACGGGTCGGGGTCGGGGCCTA
CGCCTGTCGCGGCCGCTCAGGAGGTCCCTCAGGAGGTGCCTGCCGAGGTA
CCaccctcgtcgtccgcacCCTCGGCGTTCTTAGACGGTGGCCTGAACCC
GCACATTGCCCCACCGCCAatagaggggagggaggaagggagcgaggaag
gggaggaaggcgaaggcgggggggagggcgagggtcgCTGTGGGCCGTTG
GAgggtgaaggggaggcgatCGCAATTCCCAGTACTGAATTTATGCAGAG
TGTAGCCTCGCAGGGAGCTGAGCGAGACATGTCTCTACCAAGGTCGACGg
atccctcgcccccctctttccactCCTCAGGTCCTGGCACTGCTCCATCT
CAggattcctcctcctttcctgcgcCGTAGATGAGCTGGCTTTTACACGG
CATGCGGCATGCCAGCGCTGGAAGGCAGCGCCGTAGACCGCCACGCCAAT
GGCGGCTATGTAGGGGCTTTATTTTAGTCTTGGCGTTCTCTGTCGTATCA
CAAGCACACGTACAAGACCTGTTGCGGAGACGGCCACCACATCCACACCT
TTCCTGGCTTTATCGTAAGGGCGGCGCGACGAATAATTCGTCCGTACCCA
AGTCGGTCCACGAGCCCTTGTTTACTTCCAGTCCTgcgccatcgcctcct
gtATCAACCCCCGAGGCAGAGGCGTTCCCCGAGGCCCCtacccctgccct
cctcaccgATTACCCATCACGACCACGACGAAGCAaagcccgcctcctgc
gTGACGCCGTCTTCCCCATTTACGGACGAGAGGTCCATAAGTTCTTTTCC
ATGGGTATGATCAAGTTTTTAATAGTTTTTGTGCTCACCATCACCCGAGA
CGTCAAGGACACGCTCATAGTCACCAGTTGCGGCGCAGAGTCCATTGCAT
TCCTGAAGGTCTACGGTGTTTTGCCGGCAGCAGCCGCGTTTACTGTGGCC
TACTCCAAAATGTCCAACGCGCTGAGCAAGGACGCACTCTACTACGCCTT
GGTggcgcccttcttcctcttctacctcctcttcgaccTGGTCATCTACC
CTCGCCGGCACCAGCTCCATCCCACCGCTaccgccacgtccttccAGGGC
CTGAGCTACCTGCTGGGTCTTTATAATAACTGGACCTTTGCTCTCTACTA
CATCGTCTCGGAGATCTACTCCTCGGTCTCGATCGGACTCCTGTTCTGGC
AGTTCGCCAACGACGTGATcacggtggacgaggccaagcGCTTTTACCCG
CTCTTCGGCCAgctttcctccgtcgcccccATCATCGCCGGTCAGTGCGT
GGCCCGCGTGGCGGACGGTGGGGACTTCGGGGGGAGCCTCCGGATCCTGA
CGGGCCTGACCACCCTGTGCGGGATGGGCATCATGGTCCTGTACCACTAC
TGCTCCCGCCTTGTCCAGAAGGAGGCCAGCGACGGACTCCTCACGTCCCA
CATGGTCAAGAACCTGCAGCAGAGCCGGCCTCGGCCCCAGCTATCCCTTC
AGGAgagcgcctccttccttctggGCTCCCAGTACCTGCGGTACATGGCC
GTGCTCGTCCTGGGCTTCGGCCTCGCCATCAACTTCACCGACATCCTCTG
GAAATCGATGGTCAAGGACTACTTCCCGGACAAACTCGCCTACCAACGCT
TCATGGGCTTCTACTCCTCCACCGTGGgcgccaccaccttcgtGGTCATT
TTCTTCGGCAGTAACATCGTCAAGCACCTCGGCTGGCGCATCGGCGCCCT
GGCCACCCCCGTGATGATGGCCGCGCTGgccgtccctttcttcgccgcca
TCTTCCTCAAGGGCTTCGGGGCCAGCTCCAAGCGCACGGCCCTCTTGGCC
gtaggggcgggggcgctGATGAGCGTCCTCTCGAAAGCCACCAAATACGC
GCTCTTCGATCCCACCACCCAGATGGCCTACATCCCCCTGGACGAGGAGt
ccaagagcaagggcaAGGCAGCCATCGACGTGCTCGGCTCCCGCGTCGGG
AAGTCCTTGGgggcgctcctcctccaggcctgcGTGATGGTATTCGGCTC
CGCCCTCCGGGCCTCCTACGTGGTGGGCGGGATGTTCTACGCGGTCATCT
TCTCCTGGATCTTCTCCGCCAACAATCTGGCTGGGCTCTTCCAAGAGCTC
ACGGAGCGACCGCGCAAATACGGGGCAGGCAGTGGCTTGGCGAGCGGCAG
CACGGACAgtggtggtgggaagggcggcgCGGGCAGCGACAGCAGTGGCG
CCTCCACCGACGGGTCGGGGTCGGGGCCTACGCCTGTCGCGGCCGCTCAG
GAGGTCCCTCAGGAGGTGCCTGCCGAGGTACCaccctcgtcgtccgcacC
CTCGGCGTTCTTAGACGGTGGCCTGAACCCGCACATTGCCCCACCGCCAa
tagaggggagggaggaagggagcgaggaaggggaggaaggcgaaggcggg
ggggagggcgagggtcgCTGTGGGCCGTTGGAgggtgaaggggaggcgat
CGCAATTCCCAGTACTGAATTTATGCAGAGTGTAGCCTCGCAGGGAGCTG
AGCGAGACATGTCTCTACCAAGGTCGACGgatccctcgcccccctctttc
cactCCTCAGGTCCTGGCACTGCTCCATCTCAggattcctcctcctttcc
tgcgcCGTAG back to top
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