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Properties
| Property Name | Value |
|---|
| Product | Protein-tyrosine phosphatase |
| Orig transcript id | gnl|cribi|Naga_100061g19.8575.mrna |
| Orig protein id | gnl|cribi|Naga_100061g19.8575 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:79849..82706 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9775 ID=rna9775|Name=rna9775|organism=Nannochloropsis gaditana|type=mRNA|length=2739bp
ATGCCTCAGCTTCATAGAAAGTTGCGATGGAAGGAAATTTTCGAGTATCT
GAGGCAGACGATGACCGCTACATCCGCATGGAGCTTTTCCATTTTATTTT
GTGGCTCCCTTTCTTTCCGTCTCCTCCATGTACCAGACAAGGCGCATAAA
CGTAATTATTGAAGAACGGCTGGCCTTCTTCTTGTCAAAACAAGGCTTTG
TTTGTCTTGAAGCTTCCAAATTACTGGTAACTGCTCACTTCATTATTTGT
GCTGATAACAAGAGCCGCTGTCATTGCCGATGTCGCTCATCACCGTCGCC
ACATGCAACCTGAACCAATGGGCCTTGGACTTTGACGGTAATTTGAAGCG
GATTAAACAGTCTATCTTTCAGGCAAAAGCGAAAGGAGCTAGCTATCGCC
TGGGACCGGAATTGGAGATCTGTGGGTATGGTTGTGAGGACCATTTTTTA
GAACAAGATACTTTCCTGCATTGCAACGAGAGTTTAGCCTCGCTTCTGCA
GACAGATCTGACGAATGATATCCTCTGTGATGTGGGTATGCCTATCCTTC
ATCACGGCGTCCGCTATAACTGTAGGGTCTTTTGCTTGAACCAAAAAATC
CTGCTCATCCGGCCAAAGCTCTTTCTGGCGGACGACGGCAACTACCGTGA
AAGCCGCTACTTCACACCATGGAAACGCGCAGGGTCCCCCTTGGAAGAAC
ACCTCCTACCTCTCGCCCTTCGTCGCGCAACAGGGCAAAAATCTGTTATG
TTCGGTATCGGGGCTATCGCTACCCACGACACGATGATTGCCTCGGAGAA
TTGCGAAGAGCTCTGGACGGCCCGCGCCCCTCACATTGAACACTTTCTTG
CAGGCGTGGAGATAATTGGTAATGGGAGCGCTTCCCATCATCAGCTTCGT
AAACTAGACGACCGCATCAAGCTCATCTGCGGGGCCACGGCAAAATGCGG
GGGCGTCTATCTGTACGCGAATCAGCGCGGCTGCGACGGCGGTCGCCTCT
ATTTCGACGGCTCCTCCTTGATTGTAGTCAATGGGAAAGTGGTGGCTAAG
GCTCCGCAGTTCTCCGTTAGGGACGTGGACGTGGTGACGGCGACCGTGGA
TCTTGAGGACGTACGCTCATTCCGCGCCTCCTCCGCCTCCATCCGCGAGC
AGGCTTCAAGGACGGAGGCCATTCCTCAGGTGTATGTGCCAGACGTTGCT
CTTGTCTATGAGTGGGACGGGCCCAAGTGCAGCTGGGAGGGCTGCGATCA
AAGCGAGATGGGATGGGGGGGTCGACAAAGGCAGCAGGGGTTGCCGACAC
TGCCTTTGGATCCGAGCGCGTTGTGTCACAGTCCCGAGGAGGAGTGCGGT
CTGGGGCCTGCCTGCTGGCTCTGGGACTATCTGCGTCGGTCCGGGGGCGG
GGGATTCCTTCTCCCGTTGTCGGGCGGGGCGGACTCGGCGGCCGTGGCGG
CGATCGTTGGGGTCATGTGTCACTTGGTTTACGAAGCGGTGGGAAAAGGG
GGTGGAGGCGAGGACGACGGGAAAGACGTAGGGCAGGAGGACGTGCGGCA
AGACGTCCGGCGAGTGATGGGTTATGCTCCCGACTCGAATTTTATCCCAG
AGAGCCCGCAGGATATCGCGCATGCTGTACTCCACACTGTGTACATGGGC
ACGAGCAATAGCTCGACGGTCACCAAGGCACGCGCTGCCGCTCTAGCGGC
TCAGGTGGGGGCTTTCCATTACTCCTTGAGCATAGATTCCATAGTAACAG
CGGTGCTCGGCGTCTTTAAATTTGTCTCAGGAGGACGGATGCCGCGATAT
CTATCGGAGGGGGGAACGGCCACGGAGGATTTGGCGCTGCAGAACATACA
GGCGAGATTGCGGATGGTGATGGCTTATTTGCTGGCGCAACTCACGCCAT
GGATTCGCGGAATGGGCGGTGTTGGCAGCGACAACGCCCGAGGAAGTCAA
AAAGTCGAGGTCCGTCGGAATTTTCTTCTTGTGCTGGGCAGTGCCAACGT
CGACGAGGCTCTGCGGGGGTACATGACCAAGTACGACTGCTCCTCCGCGG
ACCTCAATCCCATTGGTTCCATTTCTAAGGGAGACTTGAAGAAGACTCTG
ATGTGGGCGGCTGACAGGTTTGGGTACTCGACCTTGGCAGAAGTGGCAGC
CGCACCCCCGACGGCTGAGCTCCGTCCAATGGAAAAAAGGAGTGAAGGAC
GTAGGGTGGGCAATGGAAGTGGGGGCAGCGAAGAGCACAGTCAGATTGAC
GAGGAAGATATGGGCATGTCATATGCGGAATTGGGGTTGTACGGGCGACT
GCGAAAGATTGATCGTTGTGGGCCTGTGTCCATGTTTCTGAAGCTAATCT
CTGCGTGGCCCCACTTGAGCCCTCTTGTCATTGCAGAGAAGGTGAAACTA
TTCTTCCGCTTCTATGCAATCAACAGACACAAAATGACAACTCTAACGCC
AGCGTACCATGCCGAGCAGTACTCGCCCGATGACAACCGCTTCGATCTGA
GGCCCTTCCTGTATCCGGTGGGCTGGCCACGGCAATTTTCGATGTTGGAT
CACCTGGTGGCGAGAAGGGGGGAGCTGAGAGAGGTGCCGCAGAGTTTGAG
AGTTCAGGGACTGGATGCATGAATCAACAAAAGCGACAGAGCCAAAGGGG
GAAGATGTAAAAAAATAGTCTGGCCAAGCACCACAAGCAACACCAACATA
ACCAAGAACGAAGACAACAACACGAAGAAGGATTTATGC back to topprotein sequence of rna9775 >rna9775-protein ID=rna9775-protein|Name=rna9775|organism=Nannochloropsis gaditana|type=polypeptide|length=481bp
MTDAELAAATEILPDRLYHVSLRGKLPAETTRNAHFFSMDNELIYWNFFL
DFGPLNLAQLYRFCQRLNSKLKSESLRDKIIYYYCGLHAHKRTNAALLMA
AWSMIYLDRSPKEAFEPFCKVSSSFPPFHDASPCLCTYPLSILDCLKGIA
KARFYNFFDFCRFNVEEYEHFEQVENGDLNWIVQGKFLAFAGPQNNRELS
PEGYYTLTPENYAGYFLKRNVQLVIRLNKKYYDETKFTSLGIKHLELYYL
DGSIPTNAILQTFLKACEETPGAIAVHCKAGLGRTGTCIACYLMKHYRFT
AAEAIGWLRVCRPGSIIGPQQHYLEEMEQVMWRQGDAYRQEKMREAKSEQ
NERDNGVEAYRTSRKGLGSKPVADAAGKVDDASIAEVFEDASDEWKEQNG
GSGAFGRDECADGIPSNVVPATAELSSPCLPGYVGADGCKTNANHFSNIS
KQDSYMTSQGDSLLHRRAMVQQEQHRMSSAT back to topmRNA from alignment at KK037256.1:79849..82706- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9775 ID=rna9775|Name=rna9775|organism=Nannochloropsis gaditana|type=mRNA|length=2858bp|location=Sequence derived from alignment at KK037256.1:79849..82706- (Nannochloropsis gaditana)
GGTCTTTCAAGATCTTGATATATTTGGAATCGTCGAAGTACGTGACCGGG
ACCTTTATCTTTCACTCATGAAACGGGTCCAAGCGGCTCGACATCCTCAA
CTTTCCTCGCTACCTCTCAATGCAACGGGCAATTTTATCGAGCACGAAGC
AGAGGGACACTGTGTACCCAATCCAACCCGACATGAAGCATTGATGAAGG
CAACTGTTATAATCGAAATTTGTGTTCACTCTCAAGTGTTCTCTGGAAGC
ATGGATACAGTGAACATGCGATGACCCTTCGAATAAACAATTGAAGTGGC
TTGGTTCTAAGTTGTACCGCAATAGCAAAGACGACTCTCATAAAGTATGG
TAGGTATTCAAAATGACATTTAGTCTCATCTCCAATATACAGGTTCAAGT
TTACGGTCGGGCCTGTACCGACCTGGTTTGTCTGTAACAAAAATGACAGA
CGCGGAGCTTGCCGCTGCTACAGAGATCTTGCCTGTAAGTGATCTTTCAA
ACGCCTCTTTTTGAGGTCAGACTCTCTTCTCAATATTTTGTCCTCCTTCT
TGCGAGAAGATAGGAATTAGTATTTAAGGAAGCTCCAAAAGTTCTCTCGC
ATACTTAGTGCATGCCTCGCGTAAAATGAGTGCATAAGCGACTCCGCATG
CTCCTCTCCATACCAGTGAGGTCTAGAGCTATAACCTACCACTCAAGGTC
TAGATATCGTCGCCGCTGATTTCAATATGCGTAATTAATCTAAATACACT
ATACTCACCTCGCATGGTTTCATCCTTCACGCGTGCATTCAGGACCGACT
CTATCACGTGAGTCTGCGTGGCAAACTCCCAGCAGAGACAACCAGGAATG
CCCATTTTTTCAGCATGGACAATGAATTAATCTATTGGAACTTTTTTCTT
GACTTCGGACCGCTCAATCTTGCTCAGCTTTACCGCTTCTGTCAGCGGCT
GAACAGTAAGCTTAAGTCGGAATCGCTTCGGGATAAAATAATATACTACT
ATTGCGGCTTACATGCACACAAAAGGACCAACGCTGCTCTACTCATGGCG
GCTTGGTCTATGATATATCTAGACCGGAGCCCTAAGGAGGCATTTGAGCC
CTTTTGCAAGGTCTCCTCCTCCTTTCCCCCCTTCCATGATGCTTCTCCTT
GCCTGTGTACCTATCCCCTTTCCATCCTTGACTGTTTGAAGGGAATTGCA
AAGGCACGCTTTTACAACTTCTTCGATTTTTGCCGATTTAATGTGGAAGA
ATATGAGCATTTTGAGCAAGTGGAAAATGGAGATCTTAACTGGATTGTAC
AGGGAAAGTTTTTGGCATTTGCCGGCCCACAAAATAATCGTGAGCTATCG
CCTGAGGGATACTACACCCTCACGCCTGAAAACTATGCGGGGTATTTCTT
AAAGCGTAACGTTCAGCTAGTGATTCGTCTTAACAAGAAGTATTATGATG
AAACCAAGTAAGTAGCTAGACTTATACTGCATATGAGAGGGAGGGAAGTG
CTGGGAATGTTTCAACGCGAGAAGTATGTCGCTGGTATGGCCCATGTCTT
CATGTGTTGCGAGGCATACTCCCTCATGATGACATCCGTCTTCGTGACAA
ATCCAGACAGTCAATCCCGTATTAATCCCATCTCTTTTTCACTTCATTAT
TCACTCAGGTTCACCTCTCTAGGCATCAAACACTTGGAGCTTTATTATCT
CGACGGGTCGATCCCCACGAACGCTATTCTTCAGACGTTCCTTAAAGCCT
GTGAGGAGACCCCCGGAGCGATCGCTGTGCATTGTAAGGCTGGACTAGGA
AGGACTGGGACGTGCATTGCCTGCTACTTGATGAAACATTACCGCTTTAC
GGCGGCTGAGGCGATCGGGTGGCTTAGGGTGTGCCGGCCAGGCAGCATCA
TTGGTCCGCAGCAGCATTATCTAGAGGAGATGGAACAAGTTATGTGGCGA
CAGGGGGATGCTTACCGACAAGAGAAGATGCGAGAGGCCAAAAGCGAGCA
AAATGAGAGAGATAATGGGGTAGAAGCCTATCGGACATCCAGAAAAGGCC
TCGGGAGCAAGCCTGTGGCTGACGCTGCAGGCAAGGTCGACGACGCATCC
ATAGCTGAGGTATTTGAAGATGCCTCCGACGAGTGGAAGGAGCAGAATGG
AGGAAGCGGTGCATTTGGACGAGACGAGTGCGCGGACGGGATACCGAGTA
ATGTGGTCCCGGCTACTGCAGAACTCTCTTCCCCGTGTCTCCCCGGGTAT
GTGGGAGCCGATGGCTGCAAAACTAATGCCAACCATTTCAGCAATATAAG
CAAGCAAGATTCCTACATGACAAGTCAAGGAGACTCGCTTCTGCATCGGA
GGGCGATGGTCCAACAAGAGCAACACAGGATGTCGTCAGCTACATGAGGC
AGAAATCAAGAGAAATCAAGTGATCAATATAAAACGGCAGAAAAGATGGC
AACAAGATGGAGTGCAATAGAGAGCTCCAGTCTCTTGTACATATATTGCG
CAAGCACGTGTAGCGACTGTTGAAGCTGTTTAGATGCAGCAGCAGTTCGG
CTCCGCATTAAGGTAATATTTTAGAACTACATAGATAAGAGGGCGACATG
GTCACGATGCCTGAGCTGAAAAGAAGATGCATAAGAGAGTCTATCCTGTT
CCCTTTTTTCCGATTCGCCAGCCACTCTTCGGATCAAGGCGTGCATTCAC
GAATGGCATAAAGATCAATTGAGTAAGAGGCGAAGAAAACTTCAAGCAAG
AGAAAGTATATAAGTTCTAGGTACAGTATCAAAAGACTGGAGAGCGGTTG
CTGTCAAAGTAATATTCCTGCCCTCCCCGATGAAGTATTGACTTGGCATA
AATCCTTC back to topCoding sequence (CDS) from alignment at KK037256.1:79849..82706- >rna9775 ID=rna9775|Name=rna9775|organism=Nannochloropsis gaditana|type=CDS|length=4338bp|location=Sequence derived from alignment at KK037256.1:79849..82706- (Nannochloropsis gaditana)
GTTCACCTCTCTAGGCATCAAACACTTGGAGCTTTATTATCTCGACGGGT
CGATCCCCACGAACGCTATTCTTCAGACGTTCCTTAAAGCCTGTGAGGAG
ACCCCCGGAGCGATCGCTGTGCATTGTAAGGCTGGACTAGGAAGGACTGG
GACGTGCATTGCCTGCTACTTGATGAAACATTACCGCTTTACGGCGGCTG
AGGCGATCGGGTGGCTTAGGGTGTGCCGGCCAGGCAGCATCATTGGTCCG
CAGCAGCATTATCTAGAGGAGATGGAACAAGTTATGTGGCGACAGGGGGA
TGCTTACCGACAAGAGAAGATGCGAGAGGCCAAAAGCGAGCAAAATGAGA
GAGATAATGGGGTAGAAGCCTATCGGACATCCAGAAAAGGCCTCGGGAGC
AAGCCTGTGGCTGACGCTGCAGGCAAGGTCGACGACGCATCCATAGCTGA
GGTATTTGAAGATGCCTCCGACGAGTGGAAGGAGCAGAATGGAGGAAGCG
GTGCATTTGGACGAGACGAGTGCGCGGACGGGATACCGAGTAATGTGGTC
CCGGCTACTGCAGAACTCTCTTCCCCGTGTCTCCCCGGGTATGTGGGAGC
CGATGGCTGCAAAACTAATGCCAACCATTTCAGCAATATAAGCAAGCAAG
ATTCCTACATGACAAGTCAAGGAGACTCGCTTCTGCATCGGAGGGCGATG
GTCCAACAAGAGCAACACAGGATGTCGTCAGCTACATGAGACCGACTCTA
TCACGTGAGTCTGCGTGGCAAACTCCCAGCAGAGACAACCAGGAATGCCC
ATTTTTTCAGCATGGACAATGAATTAATCTATTGGAACTTTTTTCTTGAC
TTCGGACCGCTCAATCTTGCTCAGCTTTACCGCTTCTGTCAGCGGCTGAA
CAGTAAGCTTAAGTCGGAATCGCTTCGGGATAAAATAATATACTACTATT
GCGGCTTACATGCACACAAAAGGACCAACGCTGCTCTACTCATGGCGGCT
TGGTCTATGATATATCTAGACCGGAGCCCTAAGGAGGCATTTGAGCCCTT
TTGCAAGGTCTCCTCCTCCTTTCCCCCCTTCCATGATGCTTCTCCTTGCC
TGTGTACCTATCCCCTTTCCATCCTTGACTGTTTGAAGGGAATTGCAAAG
GCACGCTTTTACAACTTCTTCGATTTTTGCCGATTTAATGTGGAAGAATA
TGAGCATTTTGAGCAAGTGGAAAATGGAGATCTTAACTGGATTGTACAGG
GAAAGTTTTTGGCATTTGCCGGCCCACAAAATAATCGTGAGCTATCGCCT
GAGGGATACTACACCCTCACGCCTGAAAACTATGCGGGGTATTTCTTAAA
GCGTAACGTTCAGCTAGTGATTCGTCTTAACAAGAAGTATTATGATGAAA
CCAAATGACAGACGCGGAGCTTGCCGCTGCTACAGAGATCTTGCCTGTTC
ACCTCTCTAGGCATCAAACACTTGGAGCTTTATTATCTCGACGGGTCGAT
CCCCACGAACGCTATTCTTCAGACGTTCCTTAAAGCCTGTGAGGAGACCC
CCGGAGCGATCGCTGTGCATTGTAAGGCTGGACTAGGAAGGACTGGGACG
TGCATTGCCTGCTACTTGATGAAACATTACCGCTTTACGGCGGCTGAGGC
GATCGGGTGGCTTAGGGTGTGCCGGCCAGGCAGCATCATTGGTCCGCAGC
AGCATTATCTAGAGGAGATGGAACAAGTTATGTGGCGACAGGGGGATGCT
TACCGACAAGAGAAGATGCGAGAGGCCAAAAGCGAGCAAAATGAGAGAGA
TAATGGGGTAGAAGCCTATCGGACATCCAGAAAAGGCCTCGGGAGCAAGC
CTGTGGCTGACGCTGCAGGCAAGGTCGACGACGCATCCATAGCTGAGGTA
TTTGAAGATGCCTCCGACGAGTGGAAGGAGCAGAATGGAGGAAGCGGTGC
ATTTGGACGAGACGAGTGCGCGGACGGGATACCGAGTAATGTGGTCCCGG
CTACTGCAGAACTCTCTTCCCCGTGTCTCCCCGGGTATGTGGGAGCCGAT
GGCTGCAAAACTAATGCCAACCATTTCAGCAATATAAGCAAGCAAGATTC
CTACATGACAAGTCAAGGAGACTCGCTTCTGCATCGGAGGGCGATGGTCC
AACAAGAGCAACACAGGATGTCGTCAGCTACATGAGACCGACTCTATCAC
GTGAGTCTGCGTGGCAAACTCCCAGCAGAGACAACCAGGAATGCCCATTT
TTTCAGCATGGACAATGAATTAATCTATTGGAACTTTTTTCTTGACTTCG
GACCGCTCAATCTTGCTCAGCTTTACCGCTTCTGTCAGCGGCTGAACAGT
AAGCTTAAGTCGGAATCGCTTCGGGATAAAATAATATACTACTATTGCGG
CTTACATGCACACAAAAGGACCAACGCTGCTCTACTCATGGCGGCTTGGT
CTATGATATATCTAGACCGGAGCCCTAAGGAGGCATTTGAGCCCTTTTGC
AAGGTCTCCTCCTCCTTTCCCCCCTTCCATGATGCTTCTCCTTGCCTGTG
TACCTATCCCCTTTCCATCCTTGACTGTTTGAAGGGAATTGCAAAGGCAC
GCTTTTACAACTTCTTCGATTTTTGCCGATTTAATGTGGAAGAATATGAG
CATTTTGAGCAAGTGGAAAATGGAGATCTTAACTGGATTGTACAGGGAAA
GTTTTTGGCATTTGCCGGCCCACAAAATAATCGTGAGCTATCGCCTGAGG
GATACTACACCCTCACGCCTGAAAACTATGCGGGGTATTTCTTAAAGCGT
AACGTTCAGCTAGTGATTCGTCTTAACAAGAAGTATTATGATGAAACCAA
ATGACAGACGCGGAGCTTGCCGCTGCTACAGAGATCTTGCCTGTTCACCT
CTCTAGGCATCAAACACTTGGAGCTTTATTATCTCGACGGGTCGATCCCC
ACGAACGCTATTCTTCAGACGTTCCTTAAAGCCTGTGAGGAGACCCCCGG
AGCGATCGCTGTGCATTGTAAGGCTGGACTAGGAAGGACTGGGACGTGCA
TTGCCTGCTACTTGATGAAACATTACCGCTTTACGGCGGCTGAGGCGATC
GGGTGGCTTAGGGTGTGCCGGCCAGGCAGCATCATTGGTCCGCAGCAGCA
TTATCTAGAGGAGATGGAACAAGTTATGTGGCGACAGGGGGATGCTTACC
GACAAGAGAAGATGCGAGAGGCCAAAAGCGAGCAAAATGAGAGAGATAAT
GGGGTAGAAGCCTATCGGACATCCAGAAAAGGCCTCGGGAGCAAGCCTGT
GGCTGACGCTGCAGGCAAGGTCGACGACGCATCCATAGCTGAGGTATTTG
AAGATGCCTCCGACGAGTGGAAGGAGCAGAATGGAGGAAGCGGTGCATTT
GGACGAGACGAGTGCGCGGACGGGATACCGAGTAATGTGGTCCCGGCTAC
TGCAGAACTCTCTTCCCCGTGTCTCCCCGGGTATGTGGGAGCCGATGGCT
GCAAAACTAATGCCAACCATTTCAGCAATATAAGCAAGCAAGATTCCTAC
ATGACAAGTCAAGGAGACTCGCTTCTGCATCGGAGGGCGATGGTCCAACA
AGAGCAACACAGGATGTCGTCAGCTACATGAGACCGACTCTATCACGTGA
GTCTGCGTGGCAAACTCCCAGCAGAGACAACCAGGAATGCCCATTTTTTC
AGCATGGACAATGAATTAATCTATTGGAACTTTTTTCTTGACTTCGGACC
GCTCAATCTTGCTCAGCTTTACCGCTTCTGTCAGCGGCTGAACAGTAAGC
TTAAGTCGGAATCGCTTCGGGATAAAATAATATACTACTATTGCGGCTTA
CATGCACACAAAAGGACCAACGCTGCTCTACTCATGGCGGCTTGGTCTAT
GATATATCTAGACCGGAGCCCTAAGGAGGCATTTGAGCCCTTTTGCAAGG
TCTCCTCCTCCTTTCCCCCCTTCCATGATGCTTCTCCTTGCCTGTGTACC
TATCCCCTTTCCATCCTTGACTGTTTGAAGGGAATTGCAAAGGCACGCTT
TTACAACTTCTTCGATTTTTGCCGATTTAATGTGGAAGAATATGAGCATT
TTGAGCAAGTGGAAAATGGAGATCTTAACTGGATTGTACAGGGAAAGTTT
TTGGCATTTGCCGGCCCACAAAATAATCGTGAGCTATCGCCTGAGGGATA
CTACACCCTCACGCCTGAAAACTATGCGGGGTATTTCTTAAAGCGTAACG
TTCAGCTAGTGATTCGTCTTAACAAGAAGTATTATGATGAAACCAAATGA
CAGACGCGGAGCTTGCCGCTGCTACAGAGATCTTGCCT back to top
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