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Properties
| Property Name | Value |
|---|
| Product | zinc-binding dehydrogenase family protein |
| Orig transcript id | gnl|cribi|Naga_100061g29.8564.mrna |
| Orig protein id | gnl|cribi|Naga_100061g29.8564 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:55602..57569 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9764 ID=rna9764|Name=rna9764|organism=Nannochloropsis gaditana|type=mRNA|length=1581bp
CTCATCGACCTTCAACCAATCTTCTAGTAAATGCTTATGGCCAGCTTCTT
ATCGGGCATATTTACCGCGGGGCTCGCAGCGTTTCGGGGTGGCTCGGATG
CAATGCAAACGAGTACTAGCACCAAAGCAGAACAAACTGGGGAACAAGCT
GCCATTCTAAACTCGAATGAAGGCGACATCCTACGCAAATGCTGGAGACT
GGAGCAAGCCGGAAGAATTTCGGAGCTCTGTCGAGTGGAAGAGCCATTGC
CCGCCCCTGGCGCAGGCGAGGTCCGCGTCAAGGTTAAGGCTATTGGACTC
AACATGGCGGACATTTTCGCGATACTCGGGGTCCTTCATCCCAGGTCTTG
AATACAGCGGCGTCGTGGACGCCCTAGGCCCTCCAGACACAACCTCCTCC
CCCTTCCCTTCCTCCACCATCAAGGCGGGGGACCCTGTTTACGGCTTCAC
GCGCTTCGGCGCCTACGCCTCTCACCTGAATGTCCCCCTCGCCTACGTGC
GGCCCCTGCCTTCGTCCTTCTCGTTCGCGCAAGGCGCCGCCTTCATCGTC
CAGGGCCTGACTGCCTGGCACGCTATGATCGAGTTGGGAAATCTGAAGAA
GGGGCAGACGGTGCTGGTGCACTCAGCCGCGGGGGGCGTGGGCTGCTTCG
CTCTTGAGATCTGCGCAAAGTTCCAGGCATTTCCCATCGCCACCATCGGC
TCCGAGACCAAACGGGCGTTTCTGCAGTCAAGATTTGGCCTGAATGATGG
TCAGATAGTGGTCAGGGAGAAGGAGGACAGGAAGTTTGCCCGGCAATTGA
AGGACGCCGTGAGAGGGAAAAGCGGCCGGAATAGGGTAGGAGAAAGGGCA
CGGGGATCGCATGAAATGCAAGAAAAGGAGGACGGAGGCTTCGACCTGAT
ATTGGATGCATTGGGGGGCATGTATTTCAAAGAGGGCTACAAGCAATTGG
CGAGGGGAGGGAGGATGATCACTTTTGGCGCCGCTGATTACTTGTCACCG
ACAGACGGACCAAATTGGTGGAAGATCATCCCACGGTATTTGACACGGCC
GCGCTTGGATCCGGGGGATATGTGTGCGGAGAATCGAGGCGTACTGGGCT
TCAATCTGATCTGGTAGGTTGTATTGCGAGGCCTTTGCTATTATTGGTGT
GGCCGCGGTAGGAGGGCGAGACATCATCAATGTGTATTCTTATGAAGCGT
TTGTGTTTTGCGAAATAGGCAATATCGAGGCCTGGCACATTGAGTTATTT
CCTTCATTATAACACTCTTATGCCCGGTCCCTTTTCATTCTGCTACTCAC
ACAATGCTGGTGTCAGGCTTACAGACAAGGTCAAGGAGCTGAATGCGGAG
CTTGACGACATGCTCAAGATCGATTGGAATCCTCCTCACGTAGGAGCCAC
ATATCCATTTCATGAACTTCCCGATGCTGTCAGGGCGCTACAATCAGGAC
TGACAACGGGAAAGGTTGTGGTCTTGCTAAGCGACGAAGAATGTGAGGGT
CAGACCGCCCTTAAAGCGTAGTAATATGCAAATCGGGACAACATATCTGC
CAAAAAAATAATAAATCTGATGTCCCTTTTA back to topprotein sequence of rna9764 >rna9764-protein ID=rna9764-protein|Name=rna9764|organism=Nannochloropsis gaditana|type=polypeptide|length=368bp
MLMASFLSGIFTAGLAAFRGGSDAMQTSTSTKAEQTGEQAAILNSNEGDI
LRKCWRLEQAGRISELCRVEEPLPAPGAGEVRVKVKAIGLNMADIFAILG
LYGATPQGSFIPGLEYSGVVDALGPPDTTSSPFPSSTIKAGDPVYGFTRF
GAYASHLNVPLAYVRPLPSSFSFAQGAAFIVQGLTAWHAMIELGNLKKGQ
TVLVHSAAGGVGCFALEICAKFQAFPIATIGSETKRAFLQSRFGLNDGQI
VVREKEDRKFARQLKDAVRGKSGRNRVGERARGSHEMQEKEDGGFDLILD
ALGGMYFKEGYKQLARGGRMITFGAADYLSPTDGPNWWKIIPRYLTRPRL
DPGDMCAENRGVLGFNLI back to topmRNA from alignment at KK037256.1:55602..57569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9764 ID=rna9764|Name=rna9764|organism=Nannochloropsis gaditana|type=mRNA|length=1968bp|location=Sequence derived from alignment at KK037256.1:55602..57569- (Nannochloropsis gaditana)
CTCATCGACCTTCAACCAATCTTCTAGTAAATGCTTATGGCCAGCTTCTT
ATCGGGCATATTTACCGCGGGGCTCGCAGCGTTTCGGGGTGGCTCGGATG
CAATGCAAACGAGTACTAGCACCAAAGCAGAACAAACTGGGGAACAAGCT
GCCATTCTAAACTCGAATGAAGGCGACATCCTACGCAAATGCTGGAGACT
GGAGCAAGCCGGAAGAATTTCGGAGCTCTGTCGAGTGGAAGAGCCATTGC
CCGCCCCTGGCGCAGGCGAGGTCCGCGTCAAGGTATGCTGAGAAATGAAA
CCGCGCCGTCACTCGCATAGACGGTAACATAACATTGTATTGATGAAAAA
AAGCATTCGTTGTTACTTCCGCATAAGGTTAAGGCTATTGGACTCAACAT
GGCGGACATTTTCGCGATACTCGGTAGGTTGGCGGTTAGGAGTTTTTCTT
GCATGCACCTTTGGATTTGAATATGGATTTCTTATATTGAAATGTTGTAA
GATATCTCCTATCCTATTGCTGAAGGGCTGTATGGCGCCACCCCGCAGGG
GTCCTTCATCCCAGGTCTTGAATACAGCGGCGTCGTGGACGCCCTAGGCC
CTCCAGACACAACCTCCTCCCCCTTCCCTTCCTCCACCATCAAGGCGGGG
GACCCTGTTTACGGCTTCACGCGCTTCGGCGCCTACGCCTCTCACCTGAA
TGTCCCCCTCGCCTACGTGCGGCCCCTGCCTTCGTCCTTCTCGTTCGCGC
AAGGCGCCGCCTTCATCGTCCAGGGCCTGACTGCCTGGCACGCTATGATC
GAGTTGGGAAATCTGAAGAAGGGGCAGACGGTGCTGGTGCACTCAGCCGC
GGGGGGCGTGGGCTGCTTCGCTCTTGAGATCTGCGCAAAGTTCCAGGCAT
TTCCCATCGCCACCATCGGCTCCGAGACCAAACGGGCGTTTCTGCAGTCA
AGATTTGGCCTGAATGATGGTCAGATAGTGGTCAGGGAGAAGGAGGACAG
GAAGTTTGCCCGGCAATTGAAGGACGCCGTGAGAGGGAAAAGCGGCCGGA
ATAGGGTAGGAGAAAGGGCACGGGGATCGCATGAAATGCAAGAAAAGGAG
GACGGAGGCTTCGACCTGATATTGGATGCATTGGGGGGCATGTATTTCAA
AGAGGGCTACAAGCAATTGGCGAGGGGAGGGAGGATGATCACTTTTGGCG
CCGCTGATTACTTGTCACCGACAGACGGACCAAATTGGTGGAAGATCATC
CCACGGTATTTGACACGGCCGCGCTTGGATCCGGGGGATATGTGTGCGGA
GAATCGAGGCGTACTGGGCTTCAATCTGATCTGGTAGGTTGTATTGCGAG
GCCTTTGCTATTATTGGTGTGGCCGCGGTAGGAGGGCGAGACATCATCAA
TGTGTATTCTTATGAAGCGTTTGTGTTTTGCGAAATAGGCAATATCGAGG
CCTGGCACATTGAGTTATTTCCTTCATTATAACACTCTTATGCCCGGTCC
CTTTTCATTCTGCTACTCACACAATGCTGGTGTCAGGCTTACAGACAAGG
TCAAGGAGCTGAATGCGGAGCTTGACGACATGCTCAAGGTACAGACACGA
TTACAGTGAATAAGATACGACTTTGTCTATGAGATGTATGGTGAGGGAAG
CTGTGACTCAAGTTGATGCGTGGAGATGGTTAGCTTTAGAGGATGGCGCG
CAGCGTGAATAAGGCCTCTCACACAACATTTCCGTGTTCTCTCACTCATC
GACAGATCGATTGGAATCCTCCTCACGTAGGAGCCACATATCCATTTCAT
GAACTTCCCGATGCTGTCAGGGCGCTACAATCAGGACTGACAACGGGAAA
GGTTGTGGTCTTGCTAAGCGACGAAGAATGTGAGGGTCAGACCGCCCTTA
AAGCGTAGTAATATGCAAATCGGGACAACATATCTGCCAAAAAAATAATA
AATCTGATGTCCCTTTTA back to topCoding sequence (CDS) from alignment at KK037256.1:55602..57569- >rna9764 ID=rna9764|Name=rna9764|organism=Nannochloropsis gaditana|type=CDS|length=4428bp|location=Sequence derived from alignment at KK037256.1:55602..57569- (Nannochloropsis gaditana)
AGGCTGTATGGCGCCACCCCGCAGGGGTCCTTCATCCCAGGTCTTGAATA
CAGCGGCGTCGTGGACGCCCTAGGCCCTCCAGACACAACCTCCTCCCCCT
TCCCTTCCTCCACCATCAAGGCGGGGGACCCTGTTTACGGCTTCACGCGC
TTCGGCGCCTACGCCTCTCACCTGAATGTCCCCCTCGCCTACGTGCGGCC
CCTGCCTTCGTCCTTCTCGTTCGCGCAAGGCGCCGCCTTCATCGTCCAGG
GCCTGACTGCCTGGCACGCTATGATCGAGTTGGGAAATCTGAAGAAGGGG
CAGACGGTGCTGGTGCACTCAGCCGCGGGGGGCGTGGGCTGCTTCGCTCT
TGAGATCTGCGCAAAGTTCCAGGCATTTCCCATCGCCACCATCGGCTCCG
AGACCAAACGGGCGTTTCTGCAGTCAAGATTTGGCCTGAATGATGGTCAG
ATAGTGGTCAGGGAGAAGGAGGACAGGAAGTTTGCCCGGCAATTGAAGGA
CGCCGTGAGAGGGAAAAGCGGCCGGAATAGGGTAGGAGAAAGGGCACGGG
GATCGCATGAAATGCAAGAAAAGGAGGACGGAGGCTTCGACCTGATATTG
GATGCATTGGGGGGCATGTATTTCAAAGAGGGCTACAAGCAATTGGCGAG
GGGAGGGAGGATGATCACTTTTGGCGCCGCTGATTACTTGTCACCGACAG
ACGGACCAAATTGGTGGAAGATCATCCCACGGTATTTGACACGGCCGCGC
TTGGATCCGGGGGATATGTGTGCGGAGAATCGAGGCGTACTGGGCTTCAA
TCTGATCTGGTTAAGGCTATTGGACTCAACATGGCGGACATTTTCGCGAT
ACTCGATGCTTATGGCCAGCTTCTTATCGGGCATATTTACCGCGGGGCTC
GCAGCGTTTCGGGGTGGCTCGGATGCAATGCAAACGAGTACTAGCACCAA
AGCAGAACAAACTGGGGAACAAGCTGCCATTCTAAACTCGAATGAAGGCG
ACATCCTACGCAAATGCTGGAGACTGGAGCAAGCCGGAAGAATTTCGGAG
CTCTGTCGAGTGGAAGAGCCATTGCCCGCCCCTGGCGCAGGCGAGGTCCG
CGTCAAGAGGCTGTATGGCGCCACCCCGCAGGGGTCCTTCATCCCAGGTC
TTGAATACAGCGGCGTCGTGGACGCCCTAGGCCCTCCAGACACAACCTCC
TCCCCCTTCCCTTCCTCCACCATCAAGGCGGGGGACCCTGTTTACGGCTT
CACGCGCTTCGGCGCCTACGCCTCTCACCTGAATGTCCCCCTCGCCTACG
TGCGGCCCCTGCCTTCGTCCTTCTCGTTCGCGCAAGGCGCCGCCTTCATC
GTCCAGGGCCTGACTGCCTGGCACGCTATGATCGAGTTGGGAAATCTGAA
GAAGGGGCAGACGGTGCTGGTGCACTCAGCCGCGGGGGGCGTGGGCTGCT
TCGCTCTTGAGATCTGCGCAAAGTTCCAGGCATTTCCCATCGCCACCATC
GGCTCCGAGACCAAACGGGCGTTTCTGCAGTCAAGATTTGGCCTGAATGA
TGGTCAGATAGTGGTCAGGGAGAAGGAGGACAGGAAGTTTGCCCGGCAAT
TGAAGGACGCCGTGAGAGGGAAAAGCGGCCGGAATAGGGTAGGAGAAAGG
GCACGGGGATCGCATGAAATGCAAGAAAAGGAGGACGGAGGCTTCGACCT
GATATTGGATGCATTGGGGGGCATGTATTTCAAAGAGGGCTACAAGCAAT
TGGCGAGGGGAGGGAGGATGATCACTTTTGGCGCCGCTGATTACTTGTCA
CCGACAGACGGACCAAATTGGTGGAAGATCATCCCACGGTATTTGACACG
GCCGCGCTTGGATCCGGGGGATATGTGTGCGGAGAATCGAGGCGTACTGG
GCTTCAATCTGATCTGGTTAAGGCTATTGGACTCAACATGGCGGACATTT
TCGCGATACTCGATGCTTATGGCCAGCTTCTTATCGGGCATATTTACCGC
GGGGCTCGCAGCGTTTCGGGGTGGCTCGGATGCAATGCAAACGAGTACTA
GCACCAAAGCAGAACAAACTGGGGAACAAGCTGCCATTCTAAACTCGAAT
GAAGGCGACATCCTACGCAAATGCTGGAGACTGGAGCAAGCCGGAAGAAT
TTCGGAGCTCTGTCGAGTGGAAGAGCCATTGCCCGCCCCTGGCGCAGGCG
AGGTCCGCGTCAAGAGGCTGTATGGCGCCACCCCGCAGGGGTCCTTCATC
CCAGGTCTTGAATACAGCGGCGTCGTGGACGCCCTAGGCCCTCCAGACAC
AACCTCCTCCCCCTTCCCTTCCTCCACCATCAAGGCGGGGGACCCTGTTT
ACGGCTTCACGCGCTTCGGCGCCTACGCCTCTCACCTGAATGTCCCCCTC
GCCTACGTGCGGCCCCTGCCTTCGTCCTTCTCGTTCGCGCAAGGCGCCGC
CTTCATCGTCCAGGGCCTGACTGCCTGGCACGCTATGATCGAGTTGGGAA
ATCTGAAGAAGGGGCAGACGGTGCTGGTGCACTCAGCCGCGGGGGGCGTG
GGCTGCTTCGCTCTTGAGATCTGCGCAAAGTTCCAGGCATTTCCCATCGC
CACCATCGGCTCCGAGACCAAACGGGCGTTTCTGCAGTCAAGATTTGGCC
TGAATGATGGTCAGATAGTGGTCAGGGAGAAGGAGGACAGGAAGTTTGCC
CGGCAATTGAAGGACGCCGTGAGAGGGAAAAGCGGCCGGAATAGGGTAGG
AGAAAGGGCACGGGGATCGCATGAAATGCAAGAAAAGGAGGACGGAGGCT
TCGACCTGATATTGGATGCATTGGGGGGCATGTATTTCAAAGAGGGCTAC
AAGCAATTGGCGAGGGGAGGGAGGATGATCACTTTTGGCGCCGCTGATTA
CTTGTCACCGACAGACGGACCAAATTGGTGGAAGATCATCCCACGGTATT
TGACACGGCCGCGCTTGGATCCGGGGGATATGTGTGCGGAGAATCGAGGC
GTACTGGGCTTCAATCTGATCTGGTTAAGGCTATTGGACTCAACATGGCG
GACATTTTCGCGATACTCGATGCTTATGGCCAGCTTCTTATCGGGCATAT
TTACCGCGGGGCTCGCAGCGTTTCGGGGTGGCTCGGATGCAATGCAAACG
AGTACTAGCACCAAAGCAGAACAAACTGGGGAACAAGCTGCCATTCTAAA
CTCGAATGAAGGCGACATCCTACGCAAATGCTGGAGACTGGAGCAAGCCG
GAAGAATTTCGGAGCTCTGTCGAGTGGAAGAGCCATTGCCCGCCCCTGGC
GCAGGCGAGGTCCGCGTCAAGAGGCTGTATGGCGCCACCCCGCAGGGGTC
CTTCATCCCAGGTCTTGAATACAGCGGCGTCGTGGACGCCCTAGGCCCTC
CAGACACAACCTCCTCCCCCTTCCCTTCCTCCACCATCAAGGCGGGGGAC
CCTGTTTACGGCTTCACGCGCTTCGGCGCCTACGCCTCTCACCTGAATGT
CCCCCTCGCCTACGTGCGGCCCCTGCCTTCGTCCTTCTCGTTCGCGCAAG
GCGCCGCCTTCATCGTCCAGGGCCTGACTGCCTGGCACGCTATGATCGAG
TTGGGAAATCTGAAGAAGGGGCAGACGGTGCTGGTGCACTCAGCCGCGGG
GGGCGTGGGCTGCTTCGCTCTTGAGATCTGCGCAAAGTTCCAGGCATTTC
CCATCGCCACCATCGGCTCCGAGACCAAACGGGCGTTTCTGCAGTCAAGA
TTTGGCCTGAATGATGGTCAGATAGTGGTCAGGGAGAAGGAGGACAGGAA
GTTTGCCCGGCAATTGAAGGACGCCGTGAGAGGGAAAAGCGGCCGGAATA
GGGTAGGAGAAAGGGCACGGGGATCGCATGAAATGCAAGAAAAGGAGGAC
GGAGGCTTCGACCTGATATTGGATGCATTGGGGGGCATGTATTTCAAAGA
GGGCTACAAGCAATTGGCGAGGGGAGGGAGGATGATCACTTTTGGCGCCG
CTGATTACTTGTCACCGACAGACGGACCAAATTGGTGGAAGATCATCCCA
CGGTATTTGACACGGCCGCGCTTGGATCCGGGGGATATGTGTGCGGAGAA
TCGAGGCGTACTGGGCTTCAATCTGATCTGGTTAAGGCTATTGGACTCAA
CATGGCGGACATTTTCGCGATACTCGATGCTTATGGCCAGCTTCTTATCG
GGCATATTTACCGCGGGGCTCGCAGCGTTTCGGGGTGGCTCGGATGCAAT
GCAAACGAGTACTAGCACCAAAGCAGAACAAACTGGGGAACAAGCTGCCA
TTCTAAACTCGAATGAAGGCGACATCCTACGCAAATGCTGGAGACTGGAG
CAAGCCGGAAGAATTTCGGAGCTCTGTCGAGTGGAAGAGCCATTGCCCGC
CCCTGGCGCAGGCGAGGTCCGCGTCAAG back to top
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