rna9759, rna9759 (mRNA) Nannochloropsis gaditana

Overview
Namerna9759
Unique Namerna9759
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1233
Alignment locationKK037256.1:44178..44622 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100547g4.9720.mrna
Orig protein idgnl|cribi|Naga_100547g4.9720
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:44178..44622 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100547g4gene9479Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9759rna9759-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20946.1cds9728Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9759 ID=rna9759|Name=rna9759|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp
ATGAAACGACCCAGTCAGTTTGGCCATCGTACGGTCGCTGTGCCATTGTC
CCTATCCCTTCTGGTCTTCTATTTTTCCAACCCTGGCGCAAAGTCTTTTG
TAATACCATCTACACCTGTCATCAGCGATTTCGCAAATTCATGTCGTCGT
GTTCTCTCCCCAGCATATCCTTTCTTCGACGTCCATGACTCACTCCCCTC
GATCTTCTGTGGCCGGATCCCGTCCACTGAGGCAAGATGCAGACAAGCGC
CCAGAGAGGTCAACCCGCACAGACTCTTTATGAGTGCCGCGAGTCTCACC
ACACGCAGCAACAGCGGCAGCTTCCCTGAGAGAGGTGGCACCGGCGGGAG
TCGTCGGCGCACCCCCCTTAACACCCTCACCAGCAGCCTCAAAGGGCCCC
TCACGCCCAACCCACCGGGCGCGGACGGTTCCGTGAAGACCAGCACCTCC
ATCCATCTACCGGCCGAGCAACAATTGGAACTGGCACGTTGCGTCAAGTC
CTGGCTGACCTGCAAGGCTGTCAAAGCGGAGGAGGAATCGACCCTGGGTC
GGCCCATCGCTTTCTCGGAGTGGGCGCGGGCCTTGGGCGTGGAGGAGTCG
GCGCTGAGGCGACAAATCGCGGACGGGAAGGCAGCCCGGGAGCTGCTGGT
GAAGACGAACATCAACTTGGTCAAGTCCATGGCTGTGCGCTTGCACCAGA
GCCAGGAGAAGAACGAGAATAGACTGAGCGTGGACGATTTGATATTGGAA
GGGACGCAAGGCATATTAAAAGCCGCCGCCAAGTTCGACCCGACGCGCAA
CGTCCGCTTCTCCACGTATGCCGTGTGGTGGATCCGGCAGGCAATCTCCC
TCGCCATCCAGACCCACAGCAACACCGTGCGCCTGCCCGTGCTCCTGCAG
ACCCGCATTAAGAAAATCAAGGCTGCTAGGCTGCGCCTGTACCTTCAGCT
GGAGAGGGAGCCCACGCACGAGGAGGTGGGGAGGGAGGAGCTGGGCTTTG
CATTGAGCCCGTTCTCTCGCGTTGAGAGAGGAAAAGGAGCCGAGAGCGTG
TGGGGGGCAAGAGGGGGTAGCCCCCAGGCTGTTGAGGGGATAGACCTTTC
AGGGGCGTGCAACGCTCTTAAATGCTCGGGAGGGTGGATTGAGAAGATCA
CTCTTAAGCAAAGCATACTTCAATTCACATTAAAACAAGAACGCGTTTTT
GAAGCTAGCAACAAGAAGGGAAATAAAGTGTGA
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protein sequence of rna9759

>rna9759-protein ID=rna9759-protein|Name=rna9759|organism=Nannochloropsis gaditana|type=polypeptide|length=111bp
MLNYKTWQSRWTGRFLASQAQKSKHKNRSCSWPFWVLSGRAPPSPDGPLM
RDCPCAAAHATGERRRYTQVGFESQARLRIYSAKDEETIRHDTQRLFSLN
FELCVELFPRV
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mRNA from alignment at KK037256.1:44178..44622+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9759 ID=rna9759|Name=rna9759|organism=Nannochloropsis gaditana|type=mRNA|length=445bp|location=Sequence derived from alignment at KK037256.1:44178..44622+ (Nannochloropsis gaditana)
ATGCTTAACTACAAGACGTGGCAGAGCCGGTGGACCGGGAGGTTTTTGGC
CTGTCTGGTCATGGCGAACCCACAcacatgcctcctccccctcgtacTCC
CCTCTCCGCGTCCTCGACATTAGGATCTGATTTCGGGGGGGTTTATCGCA
TACATATTCAGCTCAAGCACAAAAATCTAAGCACAAAAATCGGAGCTGCT
CTTGGCCGTTCTGGGTGCTCTCCGGCCGCGCCCCGCCGTCACCTGATGGC
CCCTTGATGAGAGACTGTCCATGTGCAGCAGCCCATGCGACGGGAGAAAG
GCGACGATACACACAAGTCGGGTTCGAAAGTCAAGCACGATTAAGAATCT
ACAGCGCCAAAGATGAAGAAACAATAAGACATGACACACAACGCCTGTTT
TCGTTAAACTTTGAATTGTGCGTCGAGCTTTTCCCTCGCGTCTAA
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Coding sequence (CDS) from alignment at KK037256.1:44178..44622+

>rna9759 ID=rna9759|Name=rna9759|organism=Nannochloropsis gaditana|type=CDS|length=672bp|location=Sequence derived from alignment at KK037256.1:44178..44622+ (Nannochloropsis gaditana)
ATGCTTAACTACAAGACGTGGCAGAGCCGGTGGACCGGGAGGTTTTTGGC
CTCTCAAGCACAAAAATCTAAGCACAAAAATCGGAGCTGCTCTTGGCCGT
TCTGGGTGCTCTCCGGCCGCGCCCCGCCGTCACCTGATGGCCCCTTGATG
AGAGACTGTCCATGTGCAGCAGCCCATGCGACGGGAGAAAGGCGACGATA
CACACAAGTCGGGTTCGAAAGTCAAGCACGATTAAGAATCTACAGCGCCA
AAGATGAAGAAACAATAAGACATGACACACAACGCCTGTTTTCGTTAAAC
TTTGAATTGTGCGTCGAGCTTTTCCCTCGCGTCTAAATGCTTAACTACAA
GACGTGGCAGAGCCGGTGGACCGGGAGGTTTTTGGCCTCTCAAGCACAAA
AATCTAAGCACAAAAATCGGAGCTGCTCTTGGCCGTTCTGGGTGCTCTCC
GGCCGCGCCCCGCCGTCACCTGATGGCCCCTTGATGAGAGACTGTCCATG
TGCAGCAGCCCATGCGACGGGAGAAAGGCGACGATACACACAAGTCGGGT
TCGAAAGTCAAGCACGATTAAGAATCTACAGCGCCAAAGATGAAGAAACA
ATAAGACATGACACACAACGCCTGTTTTCGTTAAACTTTGAATTGTGCGT
CGAGCTTTTCCCTCGCGTCTAA
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Synonyms
Publications