rna9757, rna9757 (mRNA) Nannochloropsis gaditana

Overview
Namerna9757
Unique Namerna9757
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1211
Alignment locationKK037256.1:40568..41380 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100547g2.9722.mrna
Orig protein idgnl|cribi|Naga_100547g2.9722
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:40568..41380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100547g2gene9477Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9757rna9757-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20948.1cds9726Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9757 ID=rna9757|Name=rna9757|organism=Nannochloropsis gaditana|type=mRNA|length=1211bp
CGTCTTGGTAAAGAATTCTAGAAGACCTGAGTCTCTTCTGTGTGATGATA
ATTCAAATGAATGAAAAATTCCGCGTGTTCTTCGTTCACCGTTTTTCGTG
AAGCATGAATTAATACGTGAACGTTTTTGGGACCGCCCTGCTTGCATCAT
GCATGTCGCCAAGCAATTTGCCGTTTCCGCTCTTCACTTTTGTTTCGCGA
GTACCTGAAGCCTTCCGGGCCGCCTCTACTTATTGACCATGCGGCTCTTC
ACAAACACAAGAAGCTCAGCACAGAAGCGTCTAACGCCAGCTAGTTTTGG
AAAGGCTTAGCAAAAGCTAAAGTGGGACTGATGAGGCCAGCAATGCGTCG
GCCGTAGGCGTCCTGCCAAGAACTCAAAGCGTTTCGTCAAGCAGCCCAGC
GCCCTCCCGCCATGCCCCCTCCTCGCTCGCGGGCCCTCCCCGGCCCCCGC
CACCCGCCCTTCCGACTCCATCCCCGCCCGACCCCAGTCGCCCAGCTGAG
AGAACAATCCATCTTCGACGGACTGACCTCGCACAAGGTGAGGATGAAGG
CCAGGGTGGACATGCTCTCGGTGCTGGGAGCGCACGTGGCCGTGTCCCTA
AGGCTTCATGTCAGAGCGAAACCTCTTTCGCCGTCGGGGGTGTTCGTCGA
TGGAAATAGAGAGGATGATGGAGATCCTTCACGTTGGGGATCCGAGGCGG
AGGGATTTGTGACCGTTTTGCTGGGCTTCATCGGGAAGGGCCCTTGGGAG
GGAAGCGAGGGGGGCGTCGAGGGGGTTCCGAGGAGGGGAAGGGAAGGGGA
GGTAGGGGGGAAAGAGGGAGGGGAGGGGGCTGCCGGGGATGTCTTTGGGA
TGGCCGGATGGGAAAATGGAGAAGAAGAGGGAGCGAACGAGGGTAGGAAG
CGGGCGGCGGAGGAAGAAGGCCAAGTCGGAGGAGGTGATGGGGGCGGAAG
AAGGGCGAGGGAAAGGAGAGGCGGTTCGTCCCTGAGGGCGCGGCGCTTCC
TCGCAGGCCTGGCCAATGGCTGCGTGGAGGAGGTGCCGGGGCTGGTGCTG
GGGGAGGCGAGGGCAAGGACGGTGGGACTTAGCTTCTTCAAGAAAGGGGG
GGTGGCAGGGGGGGCGGAGGGAGGGGTGGCGGAGGTGGGAAGGAGGGGGA
GAGGGTGCGGCTTGGCTGGGCAGGTGCAGGGAGGATGGGCATGGGTGCGG
TCTATGGGGCG
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protein sequence of rna9757

>rna9757-protein ID=rna9757-protein|Name=rna9757|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
MFICLSRALTVSCPFAVCIPTSATSPSMETQYDRVPLAFLDEDSCPLCKM
MKTSPCNDIFRRFHQCVEWHTQRGYKDLATPCGPYALALNKCIRANALVF
PAEILQQTWDQQGFST
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mRNA from alignment at KK037256.1:40568..41380+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9757 ID=rna9757|Name=rna9757|organism=Nannochloropsis gaditana|type=mRNA|length=813bp|location=Sequence derived from alignment at KK037256.1:40568..41380+ (Nannochloropsis gaditana)
GCCCATGCTCAGGAACACACGCTGCTATGCGATTTAAAAGCTTCGATATT
GTATGTCAATAAATACCAGTAAAAAACGAGTCAGCGGTAGGATGAAAAAT
AATCATGTGTTCGTTCCTTGATTAATACGAATAAAGCCCATGCCGTCTGG
AATTGAAAACCTGTGATTTTTCTATCTCTGAAACGGCAAGTAAACGTAGC
TGTTCACGGCGAAAGCCTTCTGGTGCGATGTTTATTTGCTTAAGTAGAGC
GCTTACGGTCTCATGCCCCTTCGCAGTCTGCATCCCAACGTCGGCAACCT
CCCCTAGTATGGAGACGCAGTACGATCGAGTACCCCTAGCCTTTCTCGAC
GAAGATTCATGCCCTCTCTGCAAAATGATGAAGACATCGCCATGCAATGA
CATATTTCGTCGCTTTCATcaggtggggaagaagggcaattccaggagat
ggagagaggggctcTGGAACCACTTAACATATGCATTCAAGCATGCTGAA
TGGTGATATCCCTGTGACTCGATGGCGTACGAGGGGTGCCCATCACCCTT
CTCAATGATGAACTATTCGCTCCCATCTAAAAACCTTGTAGTGCGTGGAG
TGGCACACGCAGAGGGGATACAAGGACCTTGCGACGCCTTGCGGGCCATA
CGCCCTCGCCTTGAACAAGTGCATTCGGGCAAATGCACTCGTCTTCCCAG
CCGAGATCCTACAACAAACGTGGGACCAGCAAGGCTTCAGCACATAAAAA
GAAAGACCGCCCGCGGTGTAAAATACGGCAAGAGGTGACAATGTAAAGTC
TTACATTTATAGA
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Coding sequence (CDS) from alignment at KK037256.1:40568..41380+

>rna9757 ID=rna9757|Name=rna9757|organism=Nannochloropsis gaditana|type=CDS|length=702bp|location=Sequence derived from alignment at KK037256.1:40568..41380+ (Nannochloropsis gaditana)
ATGTTTATTTGCTTAAGTAGAGCGCTTACGGTCTCATGCCCCTTCGCAGT
CTGCATCCCAACGTCGGCAACCTCCCCTAGTATGGAGACGCAGTACGATC
GAGTACCCCTAGCCTTTCTCGACGAAGATTCATGCCCTCTCTGCAAAATG
ATGAAGACATCGCCATGCAATGACATATTTCGTCGCTTTCATcagTGCGT
GGAGTGGCACACGCAGAGGGGATACAAGGACCTTGCGACGCCTTGCGGGC
CATACGCCCTCGCCTTGAACAAGTGCATTCGGGCAAATGCACTCGTCTTC
CCAGCCGAGATCCTACAACAAACGTGGGACCAGCAAGGCTTCAGCACATA
AATGTTTATTTGCTTAAGTAGAGCGCTTACGGTCTCATGCCCCTTCGCAG
TCTGCATCCCAACGTCGGCAACCTCCCCTAGTATGGAGACGCAGTACGAT
CGAGTACCCCTAGCCTTTCTCGACGAAGATTCATGCCCTCTCTGCAAAAT
GATGAAGACATCGCCATGCAATGACATATTTCGTCGCTTTCATcagTGCG
TGGAGTGGCACACGCAGAGGGGATACAAGGACCTTGCGACGCCTTGCGGG
CCATACGCCCTCGCCTTGAACAAGTGCATTCGGGCAAATGCACTCGTCTT
CCCAGCCGAGATCCTACAACAAACGTGGGACCAGCAAGGCTTCAGCACAT
AA
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Synonyms
Publications