rna9756, rna9756 (mRNA) Nannochloropsis gaditana

Overview
Namerna9756
Unique Namerna9756
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1182
Alignment locationKK037256.1:38443..39776 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100547g1.9719.mrna
Orig protein idgnl|cribi|Naga_100547g1.9719
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:38443..39776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100547g1gene9476Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20945.1cds9725Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9756rna9756-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9756 ID=rna9756|Name=rna9756|organism=Nannochloropsis gaditana|type=mRNA|length=1182bp
CGTTGAAGGTCTTGCATCACACTTCTTTTTAGCAAAGTGCCGTCTAAAGT
TTGCTCTTTATGATTCGTTCACGTCACATAGACGCTTTTCAGTGGCGACA
GACAGGGCAAGCGAAACGACGGACGTCTCGAGCATGAGCGGCAGCACCAT
CATCCTTTACGACCACAGCGCCCTCGAAACCAAAGCGTCCGACCTATCCA
AGGAAATAAATAGTTATAGCCATGTTCAGTCGTTGATATCTTTTACGCCC
AATACCACTGAACTGGTCAAGAAGGTCATCGTGTTTCTTTCCACCGTGGC
AGATACCGCCTCTCCTGGGACCGAGGCAGCCCTGAAGGCTTGTTTCGAGG
CTCTGGCCCCAGAGGGAGAGCTGGTTGTCAAGCTCTGCAGTAGCGACGCC
GGTGACGGGGAGGCGAAGGGAGGAAAAGAAGAGACGTGCGCAGGCATGAA
AATGCAGCTCCTACTGGCTGGTTTTGTGGACGTTGAGGTGTTACCGGCCT
CCGCCTCGAGTAGCGCGAGCCTTATCGCCCACAAGCCGCAGTGGGAGGTC
GGGGCGGCGGCCTCGGTGTCCCTCCCTGTCTCCCTCCCCCGCCCCGCTAG
CTCCTCCTCCTCCTCTTCCACGGGGCAGTCAGCGGCAACGTGGAGGCTGA
CAGACGTGGACGGGGAGGGAGGGGAAGAGGGAGGGGCGGAGGGAGAGCTG
ATTGACCCCGACTCGCTGCTTGAGGACGCCGAGGTGATGGCGGGTCTGGC
GGCGAAGAGGGCGGAGCGGGAGCAGGGGCAGGGATGCGAGACGAAAAAAC
GCGCGTGCAAGAACTGCAGCTGTGGACGCGCCGAGCAGGAGGAGGGGCGG
GGCGGGGTGGCCCTGCCCGTGATGAGCGAGGAGGAGCTCGAGGCCTCGGT
GTCCTCTTGCGGGAACTGCTACAAGGGCGACGCCTTCCGGTGCGGGGGCT
GCCCCTTCCTGGGCAAGCCAGCCTTCGAGCCGGGCCAAGAGAAGCTGGTC
CTGAAGCTGGACTAGGGCGGGTTGGCGCGGGGGGGGGAAGGAGTGAGGGA
GGGAAGGGGTGTGGCTCAGAGAGGCCGTGCTTGGGGCTGGGGAAGGTCGG
GGGGTGTGGCGGGAAAGGGAGAGGGAAGGGAGGCAGACGGGCGGGGTGAG
CACGAAAGAAAAAATGCGCGAAATAGATGAGA
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protein sequence of rna9756

>rna9756-protein ID=rna9756-protein|Name=rna9756|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MPPPRSRALPGPRHPPFRLHPRPTPVAQLREQSIFDGLTSHKVRMKARVD
MLSVLGAHVAVSLRLHVRAKPLSPSGVFVDGNREDDGDPSRWGSEAEGFV
TVLLGFIGKGPWEGSEGGVEGVPRRGREGEVGGKEGGEGAAGDVFGMAGW
ENGEEEGANEGRKRAAEEEGQVGGGDGGGRRARERRGGSSLRARRFLAGL
ANGCVEEVPGLVLGEARARTVGLSFFKKGGVAGGAEGGVAEVGRRGRGCG
LAGQVQGGWAWVRSMGR
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mRNA from alignment at KK037256.1:38443..39776-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9756 ID=rna9756|Name=rna9756|organism=Nannochloropsis gaditana|type=mRNA|length=1334bp|location=Sequence derived from alignment at KK037256.1:38443..39776- (Nannochloropsis gaditana)
CGTCTTGGTAAAGAATTCTAGAAGACCTGAGTCTCTTCTGTGTGATGATA
ATTCAAATGAATGAAAAATTCCGCGTGTTCTTCGTTCACCGTTTTTCGTG
AAGCATGAATTAATACGTGAACGTTTTTGGGACCGCCCTGCTTGCATCAT
GCATGTCGCCAAGCAATTTGCCGTTTCCGCTCTTCACTTTTGTTTCGCGA
GTACCTGAAGCCTTCCGGGCCGCCTCTACTTATTGACCATGCGGCTCTTC
ACAAACACAAGAAGCTCAGCACAGAAGCGTCTAACGCCAGCTAGTTTTGG
AAAGGTAAGAGAGGGGGACAAGGGATGAGGCAGGCGTGCCTGCAAGGAGG
TAAACTCAGGCAGCCGTCCTTCCGATGGGCGCAAAAACTGCATTGCCGCA
CACTAACATGGGCAATATCGCGTACAGGCTTAGCAAAAGCTAAAGTGGGA
CTGATGAGGCCAGCAATGCGTCGGCCGTAGGCGTCCTGCCAAGAACTCAA
AGCGTTTCGTCAAGCAGCCCAGCGCCCTCCCGCCATGCCCCCTCCTCGCT
CGCGGGCCCTCCCCGGCCCCCGCCACCCGCCCTTCCGACTCCATCCCCGC
CCGACCCCAGTCGCCCAGCTGAGAGAACAATCCATCTTCGACGGACTGAC
CTCGCACAAGGTGAGGATGAAGGCCAGGGTGGACATGCTCTCGGTGCTGG
GAGCGCACGTGGCCGTGTCCCTAAGGCTTCATGTCAGAGCGAAACCTCTT
TCGCCGTCGGGGGTGTTCGTCGATGGAAATAGAGAGGATGATGGAGATCC
TTCACGTTGGGGATCCGAGGCGGAGGGATTTGTGACCGTTTTGCTGGGCT
TCATCGGGAAGGGCCCTTGGGAGGGAAGCGAGGGGGGCGTCGAGGGGGTT
CCGAGGAGGGGAAGGGAAGGGGAGGTAGGGGGGAAAGAGGGAGGGGAGGG
GGCTGCCGGGGATGTCTTTGGGATGGCCGGATGGGAAAATGGAGAAGAAG
AGGGAGCGAACGAGGGTAGGAAGCGGGCGGCGGAGGAAGAAGGCCAAGTC
GGAGGAGGTGATGGGGGCGGAAGAAGGGCGAGGGAAAGGAGAGGCGGTTC
GTCCCTGAGGGCGCGGCGCTTCCTCGCAGGCCTGGCCAATGGCTGCGTGG
AGGAGGTGCCGGGGCTGGTGCTGGGGGAGGCGAGGGCAAGGACGGTGGGA
CTTAGCTTCTTCAAGAAAGGGGGGGTGGCAGGGGGGGCGGAGGGAGGGGT
GGCGGAGGTGGGAAGGAGGGGGAGAGGGTGCGGCTTGGCTGGGCAGGTGC
AGGGAGGATGGGCATGGGTGCGGTCTATGGGGCG
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Coding sequence (CDS) from alignment at KK037256.1:38443..39776-

>rna9756 ID=rna9756|Name=rna9756|organism=Nannochloropsis gaditana|type=CDS|length=800bp|location=Sequence derived from alignment at KK037256.1:38443..39776- (Nannochloropsis gaditana)
ATGCCCCCTCCTCGCTCGCGGGCCCTCCCCGGCCCCCGCCACCCGCCCTT
CCGACTCCATCCCCGCCCGACCCCAGTCGCCCAGCTGAGAGAACAATCCA
TCTTCGACGGACTGACCTCGCACAAGGTGAGGATGAAGGCCAGGGTGGAC
ATGCTCTCGGTGCTGGGAGCGCACGTGGCCGTGTCCCTAAGGCTTCATGT
CAGAGCGAAACCTCTTTCGCCGTCGGGGGTGTTCGTCGATGGAAATAGAG
AGGATGATGGAGATCCTTCACGTTGGGGATCCGAGGCGGAGGGATTTGTG
ACCGTTTTGCTGGGCTTCATCGGGAAGGGCCCTTGGGAGGGAAGCGAGGG
GGGCGTCGAGGGGGTTCCGAGGAGGGGAAGGGAAGGGGAGGTAGGGGGGA
AAGAGGGAGGGGAGGGGGCTGCCGGGGATGTCTTTGGGATGGCCGGATGG
GAAAATGGAGAAGAAGAGGGAGCGAACGAGGGTAGGAAGCGGGCGGCGGA
GGAAGAAGGCCAAGTCGGAGGAGGTGATGGGGGCGGAAGAAGGGCGAGGG
AAAGGAGAGGCGGTTCGTCCCTGAGGGCGCGGCGCTTCCTCGCAGGCCTG
GCCAATGGCTGCGTGGAGGAGGTGCCGGGGCTGGTGCTGGGGGAGGCGAG
GGCAAGGACGGTGGGACTTAGCTTCTTCAAGAAAGGGGGGGTGGCAGGGG
GGGCGGAGGGAGGGGTGGCGGAGGTGGGAAGGAGGGGGAGAGGGTGCGGC
TTGGCTGGGCAGGTGCAGGGAGGATGGGCATGGGTGCGGTCTATGGGGCG
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Synonyms
Publications