rna9749, rna9749 (mRNA) Nannochloropsis gaditana

Overview
Namerna9749
Unique Namerna9749
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length938
Alignment locationKK037256.1:14974..16812 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100968g1.5828.mrna
Orig protein idgnl|cribi|Naga_100968g1.5828
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:14974..16812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100968g1gene9469Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9749rna9749-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20956.1cds9718Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9749 ID=rna9749|Name=rna9749|organism=Nannochloropsis gaditana|type=mRNA|length=938bp
TGTCCTCTTTCCACTTTTTGCTTTGATTGGAGCCACCAGGGCCATATTGG
GTGCACTGCCGAGCTCCCGTTGCCTACTGAAAGAGAGAGAGACGACCATG
CACCTAGCTTTGTATATCCGCTTCTTGGTTGATTCCGTGATGAAACCCCG
CAATGGCAGGGCGATGAATGATCAAGACGCCAGACGGTGGGTGGTCGCGG
TACTTCGACTTGTGTGACACCCCCTTGACCCCTTTTCCCCTTGTCCCCCC
CCTTTCCAGGAGTACGACGGGACCCTCCTTGTGTCAATTGACGCACATAC
CCACACACACTCACACAATGGACGGCCAAGTTGAGCTCTCCGCCCCTGTC
ACCGCAAGCACGAGCCGCAAGCGTAACGCACCTGCCTCCACCCCCACCAC
CGACCAAGCAAACGAGGGTCTTCTATCTTCTCAACCCTCCGCAGCCAAAC
GCCAGTCTACAGGGGCAGGCGTCGCGTCCTCCCCGCCACCTCGGGCGCAT
GAGGTGACCGTCCTCCTCCCCATCGACGCGGTGGGCCTCATGATTGGGAA
AGGAGGGCAGACCTTGAAGCGTTTGCTCGAGGAGGGGAACAGCGCCTGTG
CCATCCGGGTGCAGGATTATCAGGAAGTGAGAGCAGGGAGCAAGGAGAGG
GGGATCATACTCCGAGGCAGCTTCGAAGCGATCGAGAATGTGGAGCGCGC
CATGATCGACCTCTTGCGTCACCGCCGACAGAAAGCTGTAGACGCGAAGA
GGGAGAGGGAGGAAGCGAAGGAGGGAGGGAAGGAGGGAGGAAAGGCGGGA
GGGAGGGAAGGGGAGGAGAGGAAGCGGAAGACGTTGCGGTGGCTGATTCC
CGCGGAGCTTTCTGGGTTGTTGATTGGGAAAAAAGGCATCGGGCGGGAGG
AGATCCAGCAGGAGTCCGGTGCGAAAAGAAGGGAGGGA
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protein sequence of rna9749

>rna9749-protein ID=rna9749-protein|Name=rna9749|organism=Nannochloropsis gaditana|type=polypeptide|length=236bp
MKSSPSQKQKGRGLEDATVDALLAFLDLDAQFQKVLRAFVRLVPRIALLA
EQAVASVEVEGEGEEEGEGEGCTSMHDPTSLPACVASRCWVQAVEECERL
GGYLSPLLLAQREVTIGLEGVLNGMGRESGAGARAAQAIAGMLCREGRRR
EEVIAKTIAFLPRLLWEGGGEEGEGGREEGREWLGKVEASWSLAGRESMV
DVALVMDLLASSFVVKGITGKRQAVVGQLMALLDAE
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mRNA from alignment at KK037256.1:14974..16812-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9749 ID=rna9749|Name=rna9749|organism=Nannochloropsis gaditana|type=mRNA|length=1839bp|location=Sequence derived from alignment at KK037256.1:14974..16812- (Nannochloropsis gaditana)
CCCTCACGTTGCCGTGCCATGGCATACCATCCAACAGCCGTGGAGAAACC
TGCGGCCGGCGCTCATAGGCCTGAGAAGATCGTGGTAAGTCAAAGGGGAG
GAGGTCGAGGTCGAGGAAGACAAAAACCCATAGTTCATAAAAATATGTCC
CACATTTCTTTATTTTATTATATGGGATTAATGGAGATCTGTATCGTACG
TCGCTGTGACTGCTTGATGCGTAAAAGTCTGGGTGCCTGTGCGTTTTGTC
CCTGGGCTTTGCTCTCACGCTTTTAATCTCCGCCATGATATCTCATTGAC
ATGTCCTTTTCGACCCCCTCTTGCGGGCTAGCTCGGATAAACCGACGCCA
TTCACACCATGTCAACAGTGTCAAAAGGGTGATGAAGTCGTCGCCCTCAC
AGAAACAAAAAGGTCGAGGGCTGGAGGACGCCACAGTCGACGCTGTAAGT
GAAGGAAATCATGAGCCCTTTCCAACCCTTTTTAAAGCCCCTCATCCCGC
ATTCCTGCGCCCCCCTATCTTGTCCCCCCCGTCAGCTCCTCGCATTCTTG
GACCTAGACGCCCAGTTTCAAAAAGTTTTGCGGGCTTTTGTAAGGCTTGT
ACCCCGCATCGCCCTCTTGGCGGAGCAGGCCGTGGCGTCCGTCGAGGTTG
AGGGGGAGGGGGAGGAGGAGGGGGAGGGAGAGGGCTGCACCAGCATGCAC
GATCCAACCTCCCTCCCTGCTTGCGTGGCTTCCAGATGCTGGGTGCAGGC
GGTGGAGGAATGTGAGCGTTTGGGGGGATACCTCTCTCCCCTCCTCCTCG
CCCAGAGGGAAGTCACGATAGGGCTCGAAGGGGTCCTGAACGGGATGGGG
AGGGAGAGTGGAGCGGGGGCGAGAGCGGCCCAGGCGATAGCGGGGATGCT
CTGTCGGGAGGGGCGTCGGCGGGAGGAAGTGATCGCGAAAACAATCGCCT
TCCTTCCCAGGTTGCTATGGGAGGGCGGGGGAGAGGAGGGGGAGGGGGGG
AGGGAGGAGGGGCGGGAGTGGCTGGGGAAGGTGGAGGCCTCCTGGTCATT
GGCTGGAAGAGAGAGCATGGTGGACGTGGCCCTAGGTACGCTCGGGGGGG
AGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAC
GGTCCAGTCTACTTTTTCGGCGAAGAGAGCTACTCCTTTGTGGCCCCCTT
CTGGAGCCTCGGAAGGCCGTTTGTAGTCACGCCCGTGCCCAAGATAGCTA
ACGGCTGTTTCCTCTCCTCCCTCCCCCTCAGTCATGGACCTGCTGGCTTC
GTCCTTCGTTGTCAAAGGAATTACAGGGAAACGCCAAGCTGTTGTAGGCC
AGCTGATGGCGTTGCTCGACGCAGAGTAGGGGTTGAAGGAGCGGTGATGA
GGAAGGAAGATGAGTGAGAGGAAAGAGCTGGCGCGGCGGGCGTGAGAGAC
CAAAGTAATTTAAACAAGAACATAATGGGAAAGTTTTGGTAGACATGATT
GATGAAAAAATATTTTTCGCACGGCTTGTTGAAAGCATGTGCACGGGAAG
TCTTTGTACATCCAGGGGAGGCGCCTTTTTGTCAGTGGGATGCTGTCGAT
CCTTACCAAGCTTGTACGTCTTCAGGATAGGCGAGGCAGGGAATTAAAAT
CGTTCCATTTTTCTTTCTCTGGCGTCTGACTGGTATATAGTACTCATGTT
TGTATTGTTTTGAACATGGTGCCTGAGCGGGGTGAATTGTACGGTGCAAA
ATAACTTATCGGATGTTTTGTCTATCGCACTCGTCGAGCAATTCCTCCAC
TTCTGCTGGGCGGCTGTGGAAAGAACCAGACAGTACTGT
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Coding sequence (CDS) from alignment at KK037256.1:14974..16812-

>rna9749 ID=rna9749|Name=rna9749|organism=Nannochloropsis gaditana|type=CDS|length=2133bp|location=Sequence derived from alignment at KK037256.1:14974..16812- (Nannochloropsis gaditana)
TCATGGACCTGCTGGCTTCGTCCTTCGTTGTCAAAGGAATTACAGGGAAA
CGCCAAGCTGTTGTAGGCCAGCTGATGGCGTTGCTCGACGCAGAGTAGCT
CCTCGCATTCTTGGACCTAGACGCCCAGTTTCAAAAAGTTTTGCGGGCTT
TTGTAAGGCTTGTACCCCGCATCGCCCTCTTGGCGGAGCAGGCCGTGGCG
TCCGTCGAGGTTGAGGGGGAGGGGGAGGAGGAGGGGGAGGGAGAGGGCTG
CACCAGCATGCACGATCCAACCTCCCTCCCTGCTTGCGTGGCTTCCAGAT
GCTGGGTGCAGGCGGTGGAGGAATGTGAGCGTTTGGGGGGATACCTCTCT
CCCCTCCTCCTCGCCCAGAGGGAAGTCACGATAGGGCTCGAAGGGGTCCT
GAACGGGATGGGGAGGGAGAGTGGAGCGGGGGCGAGAGCGGCCCAGGCGA
TAGCGGGGATGCTCTGTCGGGAGGGGCGTCGGCGGGAGGAAGTGATCGCG
AAAACAATCGCCTTCCTTCCCAGGTTGCTATGGGAGGGCGGGGGAGAGGA
GGGGGAGGGGGGGAGGGAGGAGGGGCGGGAGTGGCTGGGGAAGGTGGAGG
CCTCCTGGTCATTGGCTGGAAGAGAGAGCATGGTGGACGTGGCCCTAGAT
GAAGTCGTCGCCCTCACAGAAACAAAAAGGTCGAGGGCTGGAGGACGCCA
CAGTCGACGCTTCATGGACCTGCTGGCTTCGTCCTTCGTTGTCAAAGGAA
TTACAGGGAAACGCCAAGCTGTTGTAGGCCAGCTGATGGCGTTGCTCGAC
GCAGAGTAGCTCCTCGCATTCTTGGACCTAGACGCCCAGTTTCAAAAAGT
TTTGCGGGCTTTTGTAAGGCTTGTACCCCGCATCGCCCTCTTGGCGGAGC
AGGCCGTGGCGTCCGTCGAGGTTGAGGGGGAGGGGGAGGAGGAGGGGGAG
GGAGAGGGCTGCACCAGCATGCACGATCCAACCTCCCTCCCTGCTTGCGT
GGCTTCCAGATGCTGGGTGCAGGCGGTGGAGGAATGTGAGCGTTTGGGGG
GATACCTCTCTCCCCTCCTCCTCGCCCAGAGGGAAGTCACGATAGGGCTC
GAAGGGGTCCTGAACGGGATGGGGAGGGAGAGTGGAGCGGGGGCGAGAGC
GGCCCAGGCGATAGCGGGGATGCTCTGTCGGGAGGGGCGTCGGCGGGAGG
AAGTGATCGCGAAAACAATCGCCTTCCTTCCCAGGTTGCTATGGGAGGGC
GGGGGAGAGGAGGGGGAGGGGGGGAGGGAGGAGGGGCGGGAGTGGCTGGG
GAAGGTGGAGGCCTCCTGGTCATTGGCTGGAAGAGAGAGCATGGTGGACG
TGGCCCTAGATGAAGTCGTCGCCCTCACAGAAACAAAAAGGTCGAGGGCT
GGAGGACGCCACAGTCGACGCTTCATGGACCTGCTGGCTTCGTCCTTCGT
TGTCAAAGGAATTACAGGGAAACGCCAAGCTGTTGTAGGCCAGCTGATGG
CGTTGCTCGACGCAGAGTAGCTCCTCGCATTCTTGGACCTAGACGCCCAG
TTTCAAAAAGTTTTGCGGGCTTTTGTAAGGCTTGTACCCCGCATCGCCCT
CTTGGCGGAGCAGGCCGTGGCGTCCGTCGAGGTTGAGGGGGAGGGGGAGG
AGGAGGGGGAGGGAGAGGGCTGCACCAGCATGCACGATCCAACCTCCCTC
CCTGCTTGCGTGGCTTCCAGATGCTGGGTGCAGGCGGTGGAGGAATGTGA
GCGTTTGGGGGGATACCTCTCTCCCCTCCTCCTCGCCCAGAGGGAAGTCA
CGATAGGGCTCGAAGGGGTCCTGAACGGGATGGGGAGGGAGAGTGGAGCG
GGGGCGAGAGCGGCCCAGGCGATAGCGGGGATGCTCTGTCGGGAGGGGCG
TCGGCGGGAGGAAGTGATCGCGAAAACAATCGCCTTCCTTCCCAGGTTGC
TATGGGAGGGCGGGGGAGAGGAGGGGGAGGGGGGGAGGGAGGAGGGGCGG
GAGTGGCTGGGGAAGGTGGAGGCCTCCTGGTCATTGGCTGGAAGAGAGAG
CATGGTGGACGTGGCCCTAGATGAAGTCGTCGCCCTCACAGAAACAAAAA
GGTCGAGGGCTGGAGGACGCCACAGTCGACGCT
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Synonyms
Publications