|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101673g1.3824.mrna |
| Orig protein id | gnl|cribi|Naga_101673g1.3824 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:252883..253797 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9723 ID=rna9723|Name=rna9723|organism=Nannochloropsis gaditana|type=mRNA|length=988bp
GCCGAGAACGACGAGGACAAGCGCGCCATCGCCTGCCTGGAGCGGGCTGT
GGATCAAGATCCCCACTCTCTGCCCGCCCTGCTCGCCCTCGGCGTCAGCT
ACGTCAACGAGCTCGACTCGGTCCGGGCGCTCCAGAACCTCAAGGCCTGG
GTGGAGCACAACCCCAAGTACCAGGGCCTAGAGATCCGCGTGGACGAGTA
CAGCGACGGCTCCCTCATGGACGAGGTGACGCAGCTCATGCTCCAGGCCC
AGGACTGGGACCGCGCCACCTGCGGGCCGGAGGGGCAGGACGCTGACGTG
GAGGTGGTGCTCGGCGTGCTCTACAACGTCTCCCACGACTACGACTCGGC
CGCGGCCGCTTTTCGTCAAGCCTTGGTGGCTCGGCCCAGTGACTACTCTC
TCTGGAACAAGCTGGGCGCCACCCTCGCCAACAGCCAGCGCTCCGACGAG
GCCCTCCCTGCCTACCATCGGGCGCTGGACTTGAAGCCCAAGTACGCCCG
CGGATGGCTCAACCTCGGCATCTCTCACGCGAATCTGGGCAGATACGAGG
AAGCAGCCAGGTGTTATCTGCGGGCGCTGCGCTTGAATCCCGAGGCGGGA
CACATGTGGGGATACCTCCGGGTCACCTTTACCTCTATGGAGCGCTTTGA
CCTGGTCCAACTGGCGGGGCAGCAGGATCCGAGCCTCTTCGAGGCTGAAT
TCGGACGGTAGACTGCTCGCGAGAGGGAAGGGGGGAGGGAGAGAGGATGG
GGAAGGAGAAAGAAAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
GAGGAGACGCAGACGGCGACGTCAGGTCTCTGAGAAGAGGGAAAGGATGG
AGGGGCTCGAGGTCGCGCTGTAGAAAAGAAATTTCCAAGGAAGAGGTACA
AAGAATCAACCATCACGAGTCGTGGTGGCCCGAGGGTCTGCTGAACTATT
TAAACTTGTTTCCGGTTATGCAGCGACGTCCTCCTGCC back to topprotein sequence of rna9723 >rna9723-protein ID=rna9723-protein|Name=rna9723|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MSEADANSSTLSTRPFNLLRPTCVGPGELGIKVFLLCVITLSMLALLFLL
ARLLQARYRAHGTIFPWPLCGGKQGRRGDEAASFFTVSDLFNHLVLLLCL
YEMS back to topmRNA from alignment at KK037255.1:252883..253797+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9723 ID=rna9723|Name=rna9723|organism=Nannochloropsis gaditana|type=mRNA|length=915bp|location=Sequence derived from alignment at KK037255.1:252883..253797+ (Nannochloropsis gaditana)
TGCCCGCTTTGGGAAAAAATGCTACTTTACCATCATATTGGCCTTCACGC
ACATCGTACAGAGACACCAATGGAACAACCGTGGCTTTGTCAatgccttt
ctttccaagTTGGGCCGCTCTGACCGGCACTAGCAGCACATTCAGAGATA
GCAAGTCAACGGCGGCTTGAGGCAGCCCCCCTGCCCAAGAATTTTTGACA
TTCCCGGGCCCCGATTAAGCATCTTTCAGAGGCATGTAAGTAATAGCTTG
TTAATTTTATCTTTTAGTAGGAGCCAAAGCCATTTCTGGTTTGAAAAAGC
GGTTGGGCCCTGGTTGGacctcccgttccctccttccctgttgCCTTGCA
TTTACCCGTGAGCATGGCTACGAGAGCATAAATCTTACCCCCTACAAGAA
CAAGCGTCGTTTGACGCACAGACACTACGGAAAGCCATAAGGACGCGTTA
AACCCATCGTTCTCTTGGAAGGAATGGGTCTTGCAGCCCCTcacatcccc
tccctccgtccctcccttgctccctccctccttcctccaacctTCCCTAC
TTTCCACCATCCTGTTTGCCCTTGAAAAGTGGCGGCCCTTGCACGTAAAA
GTATGTCCGAGGCCGATGCGAACTCGTCAActctctccacccgcccGTTC
AACCTGCTCCGACCCACTTGTGTGGGCCCCGGGGAGCTGGGCATCAAggt
ctttctcctctgcgTCATCACCCTCTCCATGCTCgcactcctcttcctcc
tcgctcgcctcctccaggcccgcTACCGCGCCCACGGCACGATATTCCCC
TGGCCGTTGTGTGGCGGCAAGCAGGGTCGTCGTGGGGACGAGGCCGCTAG
CTTCTTCACGGTCTCGGACCTCTTCAACCACCTGGTGCTCCTCCTGTGCC
TCTACGAGATGAGCT back to topCoding sequence (CDS) from alignment at KK037255.1:252883..253797+ >rna9723 ID=rna9723|Name=rna9723|organism=Nannochloropsis gaditana|type=CDS|length=313bp|location=Sequence derived from alignment at KK037255.1:252883..253797+ (Nannochloropsis gaditana)
ATGTCCGAGGCCGATGCGAACTCGTCAActctctccacccgcccGTTCAA
CCTGCTCCGACCCACTTGTGTGGGCCCCGGGGAGCTGGGCATCAAggtct
ttctcctctgcgTCATCACCCTCTCCATGCTCgcactcctcttcctcctc
gctcgcctcctccaggcccgcTACCGCGCCCACGGCACGATATTCCCCTG
GCCGTTGTGTGGCGGCAAGCAGGGTCGTCGTGGGGACGAGGCCGCTAGCT
TCTTCACGGTCTCGGACCTCTTCAACCACCTGGTGCTCCTCCTGTGCCTC
TACGAGATGAGCT back to top
|