|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100487g4.5516.mrna |
| Orig protein id | gnl|cribi|Naga_100487g4.5516 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:247556..250227 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9721 ID=rna9721|Name=rna9721|organism=Nannochloropsis gaditana|type=mRNA|length=655bp
CCGCGCCTCAAGAGCCCATCTCGCCCGTGCTCACCCTCACAAGGTGGTGC
ACCCGTCTCACCTATCGCACCTCCCTCTTACCAGCAAGTTATACAGCATG
GGTGACAATGGGGAAAACGGGGAGCCTAATCGCGACGGTGGTGGAGGGGC
CGGAGGGCGCGGCCCCCCCAAAATCGACGGCATGACGACCCTCAAGATCG
ACAACATCCGCTACGACTGCACCACGGAGGACCTGCGGGAGCTGTTCAAA
GACACGGGCGAGATCGGGGACGTGTACATCCCCCGGGACCACAACTCGGG
CGACAACCGGGGCTTCGCCTTCGTGCGCTACCACGAGAAGGAGGACGCGG
AGCGGGCCCTGGAGAAAGTGGACGGCACGGACTTCAAGGGCCGGGACCTC
CGGGTATCCGTGGCCACTCGGAAACGACCCGACCACTTCCGCGACGGCGG
GGGCGGGCACCGCGGGGGGGACGAGGCGGCGGCCGCTACGGACGACGACC
GCGACAGGCGGGGCGGCTACTACGGCGGCGGCGGCGGCGGATACGACGAC
CGCGGGGGCCGCGGCTACGGGGGAGGCTACCCGGACCGACGGGACCGCTC
TCGTTCCCCTCCTCGACGCAGATCCCGCAGCCGCTCCCCGCCTCGCTACG
ACTAG back to topprotein sequence of rna9721 >rna9721-protein ID=rna9721-protein|Name=rna9721|organism=Nannochloropsis gaditana|type=polypeptide|length=495bp
MGFGRRRTQAPPSCSAFLFPLLPLLLPLSHAFIAPTMPASASAVVKRPVT
SSTRLSPLSVVLSPRQREEREVEEADVQRVFGSIAQSFADKVVEKAQSAA
GLSPEDIEASLRPSLEKLVRKASAAVTEQELRPILERMAGAIEHKVWYVT
ETGALEAVPRVLEAEAREMEEMRALMAAGNCSGALAVYRDRYKRFSRNPP
PPAQTTLAFQALHAGGQVNQSVALYNYWYAAKNQGDQVLEPASLYWLTRS
LLEHANRLDMAVDVFRAHARFHCLPSGPTLLLLLQAAVDRRLFELGAELL
EATHLGGFPLPPSLGNVLVEGLLDQGALDMADRVVSVLLARRLPLDLRVG
TYFKNFVVKNGRMHLAYLHLADPRLTHSRFRASANGYNMLLWRMCRAFMR
LRETAPPASEATALSTSTPGAAALSTKNELRGLTLRIARVVAMMNRYGYR
VTPQSGAMLQDVAAATGEFGFFQVLEKKLKAIEEEGGVEEPTFGL back to topmRNA from alignment at KK037255.1:247556..250227+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9721 ID=rna9721|Name=rna9721|organism=Nannochloropsis gaditana|type=mRNA|length=2672bp|location=Sequence derived from alignment at KK037255.1:247556..250227+ (Nannochloropsis gaditana)
AGACCTCGTCCCGACACAAGCCAtcgtcccgcccccgcggcgCTGACTCA
AAGGCTCGGCTATCCCGTACCAGTATTGTTGGAGTGCGAAGGACGACTTC
GCGGTGGGCACCGGGCATATATCTGCCGGATGCATGTCAAGGCCCTGTCG
TGCTGACTCGTCGGCAGAAAGCCCGCTTGTCTCCTCTCTgactttcttcc
ttctctttcgctttcttcttttcccgcaCGCTCCGCAATGCACGCATTAT
TTTGCCACCCACATCTATGCCACAGTAATAACTCGTACGCAGTGCTGGTG
AAAATCGCGCGCAACCCGTAAAAGTACCATGGGATTCGGTAGAAGACGTA
CGCAGGCGCCGCCATCCTGctctgctttcctcttccccctccttcccctc
ctcctccccctctctcacgCCTTTATCGCGCCGACAATGCCCGCGTCCGC
GTCCGCTGTGGTCAAGAGGCCCGTCACATCGTGTAAGTGCGTGATGCCTG
CTGATTCGGTTTGATCGTGTAACCCGAATTGTCTGACGTCTCTTTTTTCG
GTAGTTTGTACTTGCGcttacccccccccccccccctataAGCTTGTCTT
GTACGGCCAAGCAGCTGAAAGAGTCAGCATTATCTCTCTGCTGGCGTCTC
GATCTCGCGCCTTTCGTGCCCTCGCGCGTTGCCCCCTCATGCCCTCCACT
CATGCATATTCTAACCTCCTCGGCGGCCTCCGTCGCTtcacccctttcct
ctttccccccgggCAGCcacccgcctctcccccctttccgtcgTTTTGTC
CCCGCGCCAGCGCGAGGAGcgtgaggtggaggaagcagacGTGCAGCGAG
TGTTCGGCTCCATCGCCCAGAGCTTCGCggacaaggtggtggagaaggct
cAGAGCGCCGCGGGCCTGTCCCCCGAAGACATCGAGGCCTCCCTGCGCCC
GTCCCTGGAGAAACTCGTCCGGAAGGCCTCCGCAGCCGTGACGGAGCAAG
AGCTCCGGCCCATCTTGGAGCGGATGGCGGGCGCGATCGAGCACAAGGTT
TGGTACGTGACCGAAACGGgggccctggaggccgtTCCGCGcgtgctgga
ggcggaggcgcgggagatggaggagatgcgggcCTTGATGGCCGCCGGGA
ACTGCTCGGGAGCCCTGGCTGTGTATCGGGACCGATACAAGCGCTTCTCC
CGCaacccgccgccgcccgcccAGACCACCCTCGCCTTCCAGGCCCTGCA
cgcgggggggcaggtgaATCAGAGCGTGGCGCTCTACAACTACTGGTACG
CGGCCAAGAACCAAGGGGACCAGGTCCTGgagcccgcctccctctacTGG
CTCACGCGCTCCCTCCTGGAGCACGCGAACCGGCTGGACATGGCAGTGGA
CGTCTTCCGAGCCCACGCCCGCTTCCACTGCCTTCCCTCTGggcccaccc
tccttctcctcctccaggctgcCGTGGACCGGCGCCTCTTCGAGCTCGGG
GCCGAGCTCCTGGAGGCGACGCACCTGGGAGgctttcccctgcccccctc
cctcggaaACGTCCTGGTGGAAGGCCTCCTGGACCAGGGCGCGCTCGACA
TGGCGGACCGGGTCGTCTCAGTGCTTCTGGCTCGGCGCCTGCCCCTCGAC
CTCCGCGTCGGCACCTACTTCAAGAACTTCGTGGTCAAGAACGGGCGCAT
GCACCTGGCCTACCTGCACCTGGCGGACCCGCGTCTGACCCACAGTCGCT
TCCGGGCCTCAGCCAACGGCTACAACATGCTCCTCTGGCGCATGTGCCGG
GCTTTCATGCGCCTCCGTGAGACGGCCCCGCCCGCTTCGGAGGCCACCGc
cctctccacgtccaccccCGGGGCCGCCGCCCTGAGCACGAAGAACGAGC
TACGCGGATTGACGCTGCGGATCGCGCGCGTGGTGGCGATGATGAACCGG
TATGGCTACCGCGTCACCCCCCAAAGCGGGGCGATGCTCCaggacgtggc
ggcggccacgggggAGTTTGGCTTCTTCCAGGTGCTGGAGAAGAAGCTGA
AGgcgatcgaggaggaggggggggtggaggagccgACTTTCGGCCTGTGA
ATtggggggagtggggggggaaggtagaAGGTGGAGGGTCAGAGGGCGTG
TACGAtcaggaggacgggggaggcggcgagggggTGATGGCTGtagatag
ggagggagaggtggggagCGGTGGGACAGGCGGGCCGGGAGAAGGCTGGG
ATGGAGCGGGCAGGTCCCCTGTGCGGTGCGGGAGGCCCATGTAGGCAGGG
TACGAGCTGATTCTGTCCGGAGACAGTGGTGAGATGCGAGGAGACgaagc
gaaagggagggcgccTGATTGAAGGCGGGATGTCTGAAGAtgcccgggga
ggaggaagaagtagCGGGCGGGGCGTGAtagggcgtgggggggggacctC
GGACGCCGGCCGAGTCCCTCATGGACAGAGttggggcgggaaaaggaagt
tGGAGCCGCTCATGCCCTCCAgacttcttcccctcgcgAAGAGTGTGTGA
ACCgagagggcggagaaggcggggcgggttGTGCCTCGAACatgcgagag
gaagggcaggaggacgTCGCTGCATAACCGGAAACAAGTTTAAATAGTTC
AGCAGACCCTCGGGCCACCACG back to topCoding sequence (CDS) from alignment at KK037255.1:247556..250227+ >rna9721 ID=rna9721|Name=rna9721|organism=Nannochloropsis gaditana|type=CDS|length=2976bp|location=Sequence derived from alignment at KK037255.1:247556..250227+ (Nannochloropsis gaditana)
ATGGGATTCGGTAGAAGACGTACGCAGGCGCCGCCATCCTGctctgcttt
cctcttccccctccttcccctcctcctccccctctctcacgCCTTTATCG
CGCCGACAATGCCCGCGTCCGCGTCCGCTGTGGTCAAGAGGCCCGTCACA
TCGTCcacccgcctctcccccctttccgtcgTTTTGTCCCCGCGCCAGCG
CGAGGAGcgtgaggtggaggaagcagacGTGCAGCGAGTGTTCGGCTCCA
TCGCCCAGAGCTTCGCggacaaggtggtggagaaggctcAGAGCGCCGCG
GGCCTGTCCCCCGAAGACATCGAGGCCTCCCTGCGCCCGTCCCTGGAGAA
ACTCGTCCGGAAGGCCTCCGCAGCCGTGACGGAGCAAGAGCTCCGGCCCA
TCTTGGAGCGGATGGCGGGCGCGATCGAGCACAAGGTTTGGTACGTGACC
GAAACGGgggccctggaggccgtTCCGCGcgtgctggaggcggaggcgcg
ggagatggaggagatgcgggcCTTGATGGCCGCCGGGAACTGCTCGGGAG
CCCTGGCTGTGTATCGGGACCGATACAAGCGCTTCTCCCGCaacccgccg
ccgcccgcccAGACCACCCTCGCCTTCCAGGCCCTGCAcgcgggggggca
ggtgaATCAGAGCGTGGCGCTCTACAACTACTGGTACGCGGCCAAGAACC
AAGGGGACCAGGTCCTGgagcccgcctccctctacTGGCTCACGCGCTCC
CTCCTGGAGCACGCGAACCGGCTGGACATGGCAGTGGACGTCTTCCGAGC
CCACGCCCGCTTCCACTGCCTTCCCTCTGggcccaccctccttctcctcc
tccaggctgcCGTGGACCGGCGCCTCTTCGAGCTCGGGGCCGAGCTCCTG
GAGGCGACGCACCTGGGAGgctttcccctgcccccctccctcggaaACGT
CCTGGTGGAAGGCCTCCTGGACCAGGGCGCGCTCGACATGGCGGACCGGG
TCGTCTCAGTGCTTCTGGCTCGGCGCCTGCCCCTCGACCTCCGCGTCGGC
ACCTACTTCAAGAACTTCGTGGTCAAGAACGGGCGCATGCACCTGGCCTA
CCTGCACCTGGCGGACCCGCGTCTGACCCACAGTCGCTTCCGGGCCTCAG
CCAACGGCTACAACATGCTCCTCTGGCGCATGTGCCGGGCTTTCATGCGC
CTCCGTGAGACGGCCCCGCCCGCTTCGGAGGCCACCGccctctccacgtc
caccccCGGGGCCGCCGCCCTGAGCACGAAGAACGAGCTACGCGGATTGA
CGCTGCGGATCGCGCGCGTGGTGGCGATGATGAACCGGTATGGCTACCGC
GTCACCCCCCAAAGCGGGGCGATGCTCCaggacgtggcggcggccacggg
ggAGTTTGGCTTCTTCCAGGTGCTGGAGAAGAAGCTGAAGgcgatcgagg
aggaggggggggtggaggagccgACTTTCGGCCTGTGAATGGGATTCGGT
AGAAGACGTACGCAGGCGCCGCCATCCTGctctgctttcctcttccccct
ccttcccctcctcctccccctctctcacgCCTTTATCGCGCCGACAATGC
CCGCGTCCGCGTCCGCTGTGGTCAAGAGGCCCGTCACATCGTCcacccgc
ctctcccccctttccgtcgTTTTGTCCCCGCGCCAGCGCGAGGAGcgtga
ggtggaggaagcagacGTGCAGCGAGTGTTCGGCTCCATCGCCCAGAGCT
TCGCggacaaggtggtggagaaggctcAGAGCGCCGCGGGCCTGTCCCCC
GAAGACATCGAGGCCTCCCTGCGCCCGTCCCTGGAGAAACTCGTCCGGAA
GGCCTCCGCAGCCGTGACGGAGCAAGAGCTCCGGCCCATCTTGGAGCGGA
TGGCGGGCGCGATCGAGCACAAGGTTTGGTACGTGACCGAAACGGgggcc
ctggaggccgtTCCGCGcgtgctggaggcggaggcgcgggagatggagga
gatgcgggcCTTGATGGCCGCCGGGAACTGCTCGGGAGCCCTGGCTGTGT
ATCGGGACCGATACAAGCGCTTCTCCCGCaacccgccgccgcccgcccAG
ACCACCCTCGCCTTCCAGGCCCTGCAcgcgggggggcaggtgaATCAGAG
CGTGGCGCTCTACAACTACTGGTACGCGGCCAAGAACCAAGGGGACCAGG
TCCTGgagcccgcctccctctacTGGCTCACGCGCTCCCTCCTGGAGCAC
GCGAACCGGCTGGACATGGCAGTGGACGTCTTCCGAGCCCACGCCCGCTT
CCACTGCCTTCCCTCTGggcccaccctccttctcctcctccaggctgcCG
TGGACCGGCGCCTCTTCGAGCTCGGGGCCGAGCTCCTGGAGGCGACGCAC
CTGGGAGgctttcccctgcccccctccctcggaaACGTCCTGGTGGAAGG
CCTCCTGGACCAGGGCGCGCTCGACATGGCGGACCGGGTCGTCTCAGTGC
TTCTGGCTCGGCGCCTGCCCCTCGACCTCCGCGTCGGCACCTACTTCAAG
AACTTCGTGGTCAAGAACGGGCGCATGCACCTGGCCTACCTGCACCTGGC
GGACCCGCGTCTGACCCACAGTCGCTTCCGGGCCTCAGCCAACGGCTACA
ACATGCTCCTCTGGCGCATGTGCCGGGCTTTCATGCGCCTCCGTGAGACG
GCCCCGCCCGCTTCGGAGGCCACCGccctctccacgtccaccccCGGGGC
CGCCGCCCTGAGCACGAAGAACGAGCTACGCGGATTGACGCTGCGGATCG
CGCGCGTGGTGGCGATGATGAACCGGTATGGCTACCGCGTCACCCCCCAA
AGCGGGGCGATGCTCCaggacgtggcggcggccacgggggAGTTTGGCTT
CTTCCAGGTGCTGGAGAAGAAGCTGAAGgcgatcgaggaggagggggggg
tggaggagccgACTTTCGGCCTGTGA back to top
|