rna9716, rna9716 (mRNA) Nannochloropsis gaditana

Overview
Namerna9716
Unique Namerna9716
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1268
Alignment locationKK037255.1:237990..238525 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100211g8.3046.mrna
Orig protein idgnl|cribi|Naga_100211g8.3046
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:237990..238525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100211g8gene9435Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9716rna9716-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20992.1cds9685Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9716 ID=rna9716|Name=rna9716|organism=Nannochloropsis gaditana|type=mRNA|length=1268bp
TGTCACCCTGTGAAGCATCGCAATCCAGCCTACGTACCACTCCCCTCCTT
CACAGCTAGAGCTGCCCGTGACATTAAACAAATCGTTGCAGCCCGCGACT
TTCTATAAAACTGTGAAGTAAATACACGTGTACGCTCACTATCTGCTATC
CCCGGCCTCAGGTGCCATCAGGCGCGGGTTCCTTTCCCCTTGACCGCCCC
TCGTGACTCCTACTACATTGAGACGGTCCAAACCCCTCCTTGTCAGCCGG
CATGGCCCTTTGCGCCTGCCTCCCCGCTTCACGCCCCCCTGCTTTTTTGG
GTTCGCGTACCACTGCCGCGGGCTTCATCATACCTCCTTTCTCCTTGGAC
CCCCCAAATTTGCAATCTTTACGCCGACACGAAAGCAGAAGCCTGCGCAC
ATTGCGATGGGTTGAGTCCCCTCGACCTCCCCCCCGCAGCGGCGGCGTCA
GCGCCGATGGCAAAGCCCAGAAATCAAGCTTTTACAAGCGTCCTTCGAAA
GCGATTGAAATGGGTGGAGGATTCTTCATTCCGGGCTTGGAGGGCTACAA
GTTGCGCCTGGCCACCGCGCTACTGGTCCTACTCCTTCTCGCCCTGAACC
GCTACCCGGGGTACACCCCTGCGGCCTCCCAGTTGACGAGCGAGGCGATC
GGTGCCGGCGCGGCAGTTATACTCCTGGCACAGGCTCTTATAGAAAAACT
GATAACAGAAGCCGGCGTTGCCCAGCAGGAGGAAGAGGACAATGGCGGGC
TTAAACCCAAAATTGGCGGCAGAAGCGGTCGGACCGGGGGGATGGAGGAA
GAATACTTGGGGCCGGGGCCGGGCTCGGCGATGGAAGACGACGTAAGATG
GGTGGGATACGCGCTAGACGAGAATTTGAACTGCCCAGCTGTGGCTTTGC
TGGATAGCGAGAGAGGGCTCCTGTACTATCGGCGGCGACGCCGCATCTCC
AGCCCTTTCCCCCCCTCTTCCTCTCCCCTGAAAGAGCTCGCTCTGGCACT
GGCGCAGGCCTTGCCCGCACAATCTCGACGCGCCGTGGGCATGAGCGACG
CACTGGCCTCGCTAGGGGGGGCGGGCGGCACCACTGGGATGGGGCTGGCG
CAAGTCCTGGGTATGAGCAAAGTCGAGGGGGCGGTGGTGGTGAGGGTAGG
ACCGCGGGCGGTGCTGGCTGTGGCACCGCCAGCGGGAGGGATCATGCGGG
ACCAAGCCGTGTGGGTGGAAAGAGCAGCAGCGTTGCTGGAGGCGTCGGGG
CTGGGGGAAGGATAGCGA
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protein sequence of rna9716

>rna9716-protein ID=rna9716-protein|Name=rna9716|organism=Nannochloropsis gaditana|type=polypeptide|length=81bp
MLRKAYRAVVLDLLVAVQASGLLAPRCHVFLSYLKPVDGVDNVYEAIPAD
ASVAPTLVTARLSPHLPACCLVRSTCSRRKD
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mRNA from alignment at KK037255.1:237990..238525-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9716 ID=rna9716|Name=rna9716|organism=Nannochloropsis gaditana|type=mRNA|length=536bp|location=Sequence derived from alignment at KK037255.1:237990..238525- (Nannochloropsis gaditana)
ATGGTGAGAGGGAGGAACAAGGTGGCGGGAGCCAGACTAGCGCCAAACCT
GTGCAGGCGTGCAAAGGTTGGGGTCGGCCTCGCCGGGCAGGCAGCCGGCG
GGCTCGTCGACGAGGGTAGCCTCGGCTCCGTCACCCACGCCCCTCAGCTA
GTACGAGGCCTCCTCTACCCTGCACGTCACCCTCCTCTTCCATACCTCCC
TCCCCGCTCACATTCTCTTACCCACAGACTACCCTGCGAGGGCGGAATAT
CGCATTCGTTCTCGGTGACTGCGTCCGCTTCCCCCCCCAGTAGCTGAGGA
AAGCCTACCGAGCTGTGGTCCTCGACCTCTTAGTCGCCGTGCAAGCCTCA
GGGCTGCTCGCCCCACGCTGTCACGTCTTTTTGTCCTACCTCAAGCCAGT
GGACGGGGTCGACAACGTGTACGAGGCCATTCCGGCGGATGCCAGCGTCG
CCCCCACCCTGGTGACAGCGCGATTGTCACCCCATCTACCTGCATGCTGT
TTGGTGAGGAGCACTTGCAGCAGACGGAAGGACTGA
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Coding sequence (CDS) from alignment at KK037255.1:237990..238525-

>rna9716 ID=rna9716|Name=rna9716|organism=Nannochloropsis gaditana|type=CDS|length=492bp|location=Sequence derived from alignment at KK037255.1:237990..238525- (Nannochloropsis gaditana)
CTGAGGAAAGCCTACCGAGCTGTGGTCCTCGACCTCTTAGTCGCCGTGCA
AGCCTCAGGGCTGCTCGCCCCACGCTGTCACGTCTTTTTGTCCTACCTCA
AGCCAGTGGACGGGGTCGACAACGTGTACGAGGCCATTCCGGCGGATGCC
AGCGTCGCCCCCACCCTGGTGACAGCGCGATTGTCACCCCATCTACCTGC
ATGCTGTTTGGTGAGGAGCACTTGCAGCAGACGGAAGGACTGAATGCTGA
GGAAAGCCTACCGAGCTGTGGTCCTCGACCTCTTAGTCGCCGTGCAAGCC
TCAGGGCTGCTCGCCCCACGCTGTCACGTCTTTTTGTCCTACCTCAAGCC
AGTGGACGGGGTCGACAACGTGTACGAGGCCATTCCGGCGGATGCCAGCG
TCGCCCCCACCCTGGTGACAGCGCGATTGTCACCCCATCTACCTGCATGC
TGTTTGGTGAGGAGCACTTGCAGCAGACGGAAGGACTGAATG
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Synonyms
Publications