rna9697, rna9697 (mRNA) Nannochloropsis gaditana

Overview
Namerna9697
Unique Namerna9697
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1712
Alignment locationKK037255.1:182524..182888 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100081g14.742.mrna
Orig protein idgnl|cribi|Naga_100081g14.742
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:182524..182888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100081g14gene9418Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9697rna9697-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20995.1cds9666Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9697 ID=rna9697|Name=rna9697|organism=Nannochloropsis gaditana|type=mRNA|length=1712bp
ATTGCTTACCTTACTGGCAATGTGGTCGGCGACGCGGAGACAATCTCGGT
ACAACTATTTTTTGCGAATTATAATATACTAGCTGTGAGCTTTGTGCTGG
GTCAGCGGGGTGGCATTTGTGACGGCGTTACCCTTCTTTCCTAACCTCAC
CTGGACACTGCTTTTTCCAGCAACGTTCTTGAGCGTTGCTGCGTGTGCCG
ACGGCAAAGCCATCCTCGACGTACTTTGTTCTCAGATTCGCGCGTACCCA
AGGCCTGATTGAGCAGGAATGGCACACAAGGAATGAAGGATTTTGAGCGG
GACTGAGAGTCTGCCGTCGCACCAAGGCTTTGACGGTAAAGACTCTCCGA
GGGCCCTTCGCCGTGAGGCTGCCATAGCGAGCTCGCGTCGAAGCCGCGAC
TTGCTTGAAACCGCGTGAATGAACCGGACGGTCGCCTATCCAAGCACTTC
GAAGCTTACTTACCAAATTTGTTGCGCAGGCTTAATTTCTTTATGCAAAG
CATTTCTTCGCCCGTGTGTACAGGACGTGCCCACCAGCAGGAAGACCCGA
ATGAGGGTTGAAGGAGCGCTTTTTACTTGTACACTAGCTTTTTATTTCGC
TTCTACGGGCGCGGCAGCAGGCAGTTCCAGCGCGGCCCTCGCTTTCCAGA
CACCTGGACTCCCCTCCCGCAGCCCCTCTGCGTTGCTAGGTCTAGTGGTG
CCTCAGTCGTTCACTGCTTCCACTCGACCCTTCTCACATTTGGCCTACCT
GGCGGATAGAAAGGCCTGGCAGGGACGCACCGCAGTCGTAACAGAAAGCA
ACGGGGGGGAGGTCTCCTGGTCACGGCTTGCGCGCATGGCGGGGGGTGGA
AACGCCGCCTCCAATCGGGGCAACGAGCCCTCTTTATGGAATCTGCCTAA
TATCCTAACGTTGCTGCGCGTCATTTCTATCCCTGTCCTCATCATCATCT
ACTACACGAGCGCGAGCTGGCGGAACGCGGCCTGCTCGGGGCTCTTCGTC
TTTGCGGCCATGACGGACTGGCTAGACGGCTATCTAGCCCGACGTATGAA
CCTGAGCTCCCCTCTGGGCGCTTTCCTCGACCCCGTTGCTGACAAGCTCA
TGGTGGCCACGGCTTTGGTCCTCATGGCGGATAGGTTGAACTCGCCGGTC
GTCACCGTCTCCACCGCCATCATTATCTGCCGTGAGATAGGAGTCTCCGC
TCTCCGCGAATGGATGGCGTCGCAAGGGGCTCGAGACACCGTAGCGGTGG
GCTGGTGGGGTAAATTTAAGACGGCCACGCAGATGCTAGCCCTCTCTGTC
TTGCTCTACGTTCAGCCCCCCTTGGCCAGCCACGATGCGCTGGCGCACAA
GCTTCTGGAGGTGGGCGTGGGTCTGTTGGCTTTTTCGGCTGTATTGACTG
TGTATTCTGCTGTTGGATACGTGCAGGCAGCCTGGCCCGCTTTAACAGGC
AAGGCTAAATGAGGAGTGAGGACTTTGCCGCGGAGGAGGTTAATTTCGAC
GAGTGCAACAGTGTGACGAGCATAATCGCATCTCAAACTGACTATTGATC
GGCATTCAAAAATAAACAAAACTTGAACAAAGCATCGATTTTCCAAAAAA
AAGTGTTCATTCGCCCATAGGTACGACCCAGTAACGAATGTGATGCCTTC
GCTTCCGAGTCTGTGCTCGGTCCTTTCCACAATCTCAGTACATGACACCC
GCCTCTCACTGT
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protein sequence of rna9697

>rna9697-protein ID=rna9697-protein|Name=rna9697|organism=Nannochloropsis gaditana|type=polypeptide|length=86bp
MAERDFYTQTLIGRKKPQVIELRYRTNPGRTVRGGCHVLRLWKGPSTDSE
AKASHSLLGRTYGRMNTFFWKIDALFKFCLFLNADQ
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mRNA from alignment at KK037255.1:182524..182888-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9697 ID=rna9697|Name=rna9697|organism=Nannochloropsis gaditana|type=mRNA|length=365bp|location=Sequence derived from alignment at KK037255.1:182524..182888- (Nannochloropsis gaditana)
ATGGCGGAGAGGGACTTTTGTGGACTTGAGCAAGCGGGCGGGTGCGCAGG
ATGGCGCGAGGAGAGAAGGGAGGAGAGACGGGCTAATACAGGGCACATCT
TCATCGGAGTGTAGGACCGATAGACACTCAGACACTCATAGGAAGGAAAA
AGCCACAAGTGATTGAACTCAGGTACAGAACGAACCCCGGCAGAACAGTG
AGAGGCGGGTGTCATGTACTGAGATTGTGGAAAGGACCGAGCACAGACTC
GGAAGCGAAGGCATCACATTCGTTACTGGGTCGTACCTATGGGCGAATGA
ACACTTTTTTTTGGAAAATCGATGCTTTGTTCAAGTTTTGTTTATTTTTG
AATGCCGATCAATAG
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Coding sequence (CDS) from alignment at KK037255.1:182524..182888-

>rna9697 ID=rna9697|Name=rna9697|organism=Nannochloropsis gaditana|type=CDS|length=522bp|location=Sequence derived from alignment at KK037255.1:182524..182888- (Nannochloropsis gaditana)
ACACTCAGACACTCATAGGAAGGAAAAAGCCACAAGTGATTGAACTCAGG
TACAGAACGAACCCCGGCAGAACAGTGAGAGGCGGGTGTCATGTACTGAG
ATTGTGGAAAGGACCGAGCACAGACTCGGAAGCGAAGGCATCACATTCGT
TACTGGGTCGTACCTATGGGCGAATGAACACTTTTTTTTGGAAAATCGAT
GCTTTGTTCAAGTTTTGTTTATTTTTGAATGCCGATCAATAGATGGCGGA
GAGGGACTTTTACACTCAGACACTCATAGGAAGGAAAAAGCCACAAGTGA
TTGAACTCAGGTACAGAACGAACCCCGGCAGAACAGTGAGAGGCGGGTGT
CATGTACTGAGATTGTGGAAAGGACCGAGCACAGACTCGGAAGCGAAGGC
ATCACATTCGTTACTGGGTCGTACCTATGGGCGAATGAACACTTTTTTTT
GGAAAATCGATGCTTTGTTCAAGTTTTGTTTATTTTTGAATGCCGATCAA
TAGATGGCGGAGAGGGACTTTT
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Synonyms
Publications