rna9671, rna9671 (mRNA) Nannochloropsis gaditana

Overview
Namerna9671
Unique Namerna9671
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length983
Alignment locationKK037255.1:111728..112418 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101771g1.5764.mrna
Orig protein idgnl|cribi|Naga_101771g1.5764
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:111728..112418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101771g1gene9391Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9671rna9671-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21032.1cds9640Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9671 ID=rna9671|Name=rna9671|organism=Nannochloropsis gaditana|type=mRNA|length=983bp
CTCGACGCGCTTTCGTCGCTATCATTAAGGACACGGGGGCCTCGTCCTGT
AGCCATGCTGCCCGTCCTGCACCTCCTTCTTCCCTCCGCTTCACCCTCCT
CGCCTGACAACATCCATCACCCGTAGCTATTACCACCGCCTCTATCCCTT
GTTAAAAAGGATTGCACGATGATGTCGTCACTCCTTGCCATCTCTTCCCG
CGCCCTGGCCCTCGCTCTTGCCCCTTCCTTTCTCCTCCTGCTCACTGGTC
CCTCCAACCTCCTCCCTCCTGACCACGCCCGGGTCATTTTCTCCGCCTCT
ATCGCCCGAATAGGAGGGAATCAAAGTGCCCTCGCCACTCTCGTCTCGCA
AGCCTTGCTGCACTATCCCGATGCAGTCCACGCGCCCCCCGACTTCGATG
TTTGGCCGTGGGTGCCGCCGTTGCTGCATGCCTCTGCTGGGGGGAACGTG
GAGCTCACCGAGGTTCTTTTGCAAGCCGGCGCCGACCCCCTCCGTGGATC
CCGGCGACACCGCGACCCGCCCTCACAGGATAAGGATGGGGACAGGGTGG
GACGCGGCGGGGAGGGAGAGACGCCGTTTTATGTGGCCTGCCAGGGCGGG
TACGAAGGGGTGGTGAGGCGCCTGGGGGACGTGCAGGCGGTGCGGGAACA
GGAGGGACGGGTAACGAACACGGGGCTGATGGCCGCCAGCGAAGGGGGCC
ACGTGGGGGTGGTTCGTTACCTACTGGCATGCTTGTATGCCCCCCACCTC
CCCTCCTCTCGCTCTCGCCTTCCCCCCCTCGACATCGACGCCCAAGACGC
CCGCGGGGCTTCTGCTCTTCACTTGGCCTGTCGCCGAGACCGCGCGGAAG
TCGTCTCCCTCCTTCTTGCAGCCGGGGCCAGCTTGGAGGCGCGAGTGGGA
GGACGGGCGGGGAGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGAAGGTAGGTAGGGAGGGAGGGAGGGAGAG
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protein sequence of rna9671

>rna9671-protein ID=rna9671-protein|Name=rna9671|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
PLPALLPTRASGTGLTAPCFPALASSSIETLRHPAIPPPALLLPLRFRPL
PLHHPSLLLDRLGPLGRGQGVEGRRMGERGGRQEREGVSAGPGALPRGGG
GPSRGRGDRGRGERGVGVRGGRGKAGWKGWFMRQVEGVKEGKEGLGRRGG
RRKGERRDADPPYFTLCGDWQVLPTISLQTGSLYVECQSLCRMTICV
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mRNA from alignment at KK037255.1:111728..112418+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9671 ID=rna9671|Name=rna9671|organism=Nannochloropsis gaditana|type=mRNA|length=691bp|location=Sequence derived from alignment at KK037255.1:111728..112418+ (Nannochloropsis gaditana)
cctcttcctgccctccttccgacCCGCGCGTCAGGGACTGGACTTACAGC
GCCAtgttttcccgccctcgcctccagTTCCATCGAGACCTTACGCCACC
CTGCCatacccccccccgccttgctcctccctcttcgcttccgccccctc
cccctccaccacccttccctccttctcgatcgGCTTGGACCTCTcgggag
gggccagggggtggagggaaggaggatgggggaacgggggggcagacagg
agagggagggtgtctccgcgggccctggcgcccttcctcggggaggaggg
gggcctaGTCGCGGAAGAGGTGacagggggcgaggagagaggggagtggg
agttagaggaggaaggggaaaagcaggatggaaaggatggTTTATGCGCC
AAGTCGAGGGggtgaaagaggggaaggagggcttggggaggcggggcggg
cggcggaagggagagcgcAGAGATGCCGACCCCCCGTACTTCACTCTCTG
TGGAGACTGGCAAGTGTTACCGACGATTTCCTTGCAAACTGGCAGTCTCT
ATGTAGAATGCCAATCTCTGTGTAGAATGACCATCTGTGTGTAGAATGGC
AAGGGGGCATAGCACGATGTACTGAATAAAAGGAAAGCAGCGACACAGCA
TCAATAAgtcaagaagaaaagcaaaatCCGGGTACcattct
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Coding sequence (CDS) from alignment at KK037255.1:111728..112418+

>rna9671 ID=rna9671|Name=rna9671|organism=Nannochloropsis gaditana|type=CDS|length=594bp|location=Sequence derived from alignment at KK037255.1:111728..112418+ (Nannochloropsis gaditana)
cctcttcctgccctccttccgacCCGCGCGTCAGGGACTGGACTTACAGC
GCCAtgttttcccgccctcgcctccagTTCCATCGAGACCTTACGCCACC
CTGCCatacccccccccgccttgctcctccctcttcgcttccgccccctc
cccctccaccacccttccctccttctcgatcgGCTTGGACCTCTcgggag
gggccagggggtggagggaaggaggatgggggaacgggggggcagacagg
agagggagggtgtctccgcgggccctggcgcccttcctcggggaggaggg
gggcctaGTCGCGGAAGAGGTGacagggggcgaggagagaggggagtggg
agttagaggaggaaggggaaaagcaggatggaaaggatggTTTATGCGCC
AAGTCGAGGGggtgaaagaggggaaggagggcttggggaggcggggcggg
cggcggaagggagagcgcAGAGATGCCGACCCCCCGTACTTCACTCTCTG
TGGAGACTGGCAAGTGTTACCGACGATTTCCTTGCAAACTGGCAGTCTCT
ATGTAGAATGCCAATCTCTGTGTAGAATGACCATCTGTGTGTAG
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Synonyms
Publications