rna9662, rna9662 (mRNA) Nannochloropsis gaditana

Overview
Namerna9662
Unique Namerna9662
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length399
Alignment locationKK037255.1:86804..87852 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102087g1.4080.mrna
Orig protein idgnl|cribi|Naga_102087g1.4080
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:86804..87852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102087g1gene9382Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21042.1cds9631Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9662rna9662-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9662 ID=rna9662|Name=rna9662|organism=Nannochloropsis gaditana|type=mRNA|length=399bp
ATGCCCTCCCTCTTTGACGTCCGCCCGCTGTACTACAAGGAAAAAGGCGC
GAACGTGGTCCGTACCTTAGCTTTCTGCCTCTCCCTCGACACCCCGTACC
TCCTCATCAACGCCTGCACCTCCTGCCTCTTCACCCTCGTCCTCCACCTC
CTGGTGCCGCTCCGCCCCGGCCTCGGTCCCTTCCTCTACTACGCCGGCGC
CCTCCTCCTCATGTCCTGGACCTCCCTCTCCCTCATCGTCTTCCTCTCCT
CCACCCTCCCCTCCATCCGCCGCCTCAGTTCCCTCTGGAGCTTCCTGGGC
TACGTCATCACTGTCTCAGCCGGCTTTATGGCCCGAGTGCCTTCCATGCC
CGCCTGGGCGAACCTGGCCACGCTCTTCATTCCTGGTGCTTTTATGTAA
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protein sequence of rna9662

>rna9662-protein ID=rna9662-protein|Name=rna9662|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
PSFPSFILSLARRRRFSCFSGMAAYLAPSCSPTNLNSPSSLSPSYIVSSS
HTVTPAWVSAVIDRYFPDRFPQLPRGEGSPRATSKKVFDVRKAERLLGRP
LRAPEETLRDMVQALLEARGEGGV
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mRNA from alignment at KK037255.1:86804..87852-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9662 ID=rna9662|Name=rna9662|organism=Nannochloropsis gaditana|type=mRNA|length=1049bp|location=Sequence derived from alignment at KK037255.1:86804..87852- (Nannochloropsis gaditana)
CCTTCCTTCCCTTCCTTTATTCTTTCCCTTGCTCGTCGTCGCCGTTTTTC
TTGCTTTTCGGGAATGGCAGCTTACCTAGCGCCCTCATGCTCACCCACGA
ACCTTAACTCCCCTTCCTCCCTCTCCCCCAGCTATATCGTCTCCTCGTCC
CACACCGTAACGCCCGCCTGGGTCTCGGCCGTTATCGACCGTTATTTCCC
CGACCGTTTCCCCCAACTTCCCCGGGGCGAAGGATCTCCTAGGGCGACAA
GCAAGAAAGTGTTCGACGTCCGAAAGGCCGAGAGGTTGTTGGGACGGCCG
TTACGGGCGCCAGAGGAGACCTTGCGGGACATGGTGCAGGCGCTGCTGGA
GGCCCGGGGGGAGGGAGGCGTGTAAATAAACATGGGGCGGAACACTTGCA
ATGGAGGAAGGAGATGTGCATGACTTGAGCTATTGAAGGAAGTGACAAGC
ATTAAAAAGTCGGGATCAGGAGGGGGTCGAGAGAGGAGGCTTGTGTTCAT
AGGTGTGTTGGGGAGGGAAGGATATGGGCCAGGGTCCCGAGGGAGGGGCG
CAGAATATGGAAAGGAAAGCCATAGACGTGCCATGGATGGATGCGACCGG
GTGTAGAGGGGAAAGAACCTATCCTCTCCGTGCCGCGACGCTTCATTTGT
TGCTCATTTCGTCGTCCTTTGGGGTGATTTTGATTCGCCTTGACTGGGCA
CGGAGGTAGTCGCGGTCTTCTCAGGCCCTACCGCACCATCAGATCGTTAC
AAGGCAGGCGAGGAGACAGAGGGGCCTCGCGGAGGATGCGACGAGGCTGT
CGCCCGCCCCTGAGTCCTTCCAACCCCATCCCTCCTTTTCGAGCTTCCCC
CCCCCCACTCCCACGATGTCTCTGAGGCGCTACCACAAGCATTCTGACCC
CTGTCTCTTTCCCTCCTTCCCGACCGCCTGCGCCCTACCGCTTTTCAAAA
TTCAAATGCAAGCTGCAGACGATCATGCCGATCCGCAGGAGGAGGATCAT
CGCGAGCAAGACTCCCGGGGTCCACCAGGCCTGCCAGGGGGGGGAGCCA
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Coding sequence (CDS) from alignment at KK037255.1:86804..87852-

>rna9662 ID=rna9662|Name=rna9662|organism=Nannochloropsis gaditana|type=CDS|length=375bp|location=Sequence derived from alignment at KK037255.1:86804..87852- (Nannochloropsis gaditana)
CCTTCCTTCCCTTCCTTTATTCTTTCCCTTGCTCGTCGTCGCCGTTTTTC
TTGCTTTTCGGGAATGGCAGCTTACCTAGCGCCCTCATGCTCACCCACGA
ACCTTAACTCCCCTTCCTCCCTCTCCCCCAGCTATATCGTCTCCTCGTCC
CACACCGTAACGCCCGCCTGGGTCTCGGCCGTTATCGACCGTTATTTCCC
CGACCGTTTCCCCCAACTTCCCCGGGGCGAAGGATCTCCTAGGGCGACAA
GCAAGAAAGTGTTCGACGTCCGAAAGGCCGAGAGGTTGTTGGGACGGCCG
TTACGGGCGCCAGAGGAGACCTTGCGGGACATGGTGCAGGCGCTGCTGGA
GGCCCGGGGGGAGGGAGGCGTGTAA
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Synonyms
Publications