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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100221g5.4571.mrna |
| Orig protein id | gnl|cribi|Naga_100221g5.4571 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:74390..75940 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9656 ID=rna9656|Name=rna9656|organism=Nannochloropsis gaditana|type=mRNA|length=2166bp
AATGAACCTCCCCGCGCTTAGGTATCCCAACGAAGGAAGAGTCGCCGTCC
TCATTCGATCTTAGGACGGTCAATGTGTTCTTATTTTTTCCTCCTTGTAC
TTTTCAGGTTTGGGTCCCACCAATGCATTTAAATGAGCCTCCTGTGCTCG
TTGAGCAGATCTAATTCGGGTCCCGCTCCACCTCTGTCATCCTGCATCCA
TGACCACCCGGAGGCACAGCAAGAAAGGCAGCGGCGAACGTGCTGCCAAG
AGCGGCCCGATGAAGTATAAAGACACCCCCAAAATCTCAAAAGATCGGAT
TAAACATGTGCAGCAGCAGTGTGTATCATTTTTAAATGCCCTGGAATTGG
GTCGTGTTGGACTCACCTGTCGCGCTTTGCATCTGGCAGCGACGGAATGC
TTACGGTACGGGGCGGTGGGGACACTTGAAGGACAATGGGCACGACCCCC
GTCCCCATTCCTTTGAATCCGTCAAAAATCCATGTCTGACATCATTCCCT
CTCTTTAATTTTTTCTTCGTACCGCAATTCACAACCCTGGCCTGCCTGGA
TGCCCCCGGCGCTCTCTCTTTAGCTTGCTGCAAACCGACATTACACGCGG
CCAGTCGCCCATGCACACGCCGTTACCTTGCGTCCCACCCCCACCTTCCT
CGGGCCTTCCACCCCTTCCCCTCCTTCCGTCCACCTTCCGATGGGTGGAT
TCCGTGGTTCTGCCGTCGGGAACACACAACCGGCGCCTGCACCGCCGGGG
GGGGAGGGCTGGGAGCGCGGGGAAGGGTCAGACGCAGGGGGCGGAAGCGG
CGGAGGGGTGTGGCTGCGATGGAGAGAGCAGGAACAGCGCAGCCCTGTCT
TCGCCCTCGTCTTTTCCCCTGGTCTGTTGCCATGATGCTTCCTGTCCCTG
TTACCGGACTGCCCACAGGATCGCCCTTGGCGACGCCCCCCTTCCCGGTG
AACACAGCGGCAGCAACGCTGGCAAGGCCAGCATCGAGAGTATTCCTAGT
CCCAGTACCAGGCCAAAGAGCGACCAGGACCAGAGCAAGGGTGACTCCAC
CACTGCCACCGATACGCACACCATCGACGACGAAAAAGGCAGCAACAACA
TCGACGCCACGCCCGACAACAATGACGTGGTCCGTCACCGCATGCCCAGC
AACAGCAGTAACCCCGTGGCAGGTCAAGATGCTGACCGGCCCCTTTCCCC
CACATCATCCCCATCTTCTTCAACCTCTTCCTCCTTCAAATTTGAATTTG
AATGCTCTTCCTCCTGCCGTTGCCTACCCGACCAGTGCCAGCTTCGGCCC
ACCCAAGCGAGTGCTCGACTTCCTCTCTCCCTCGGCTATCTCCCCAAGAA
GGGTTGGGGCGTCTTTTTCTCCCCGCCTCCGTCCTGCCCTCCCGCCCGCC
CTCCCTCCCTCCCTCCTCACACCTTCGTTGCCGAATATACCGGGGAGCTG
ATCAGCACCGTGGAGGCCCGTCGCCGTCTCGCGATCTACGACGAGGTATC
CGCCCTTTCTTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCC
CGGGGATTGGAAAGCGCCCTTCCCCCCCGGCAGGGTGCACGCACGCCGCG
GAACATGTCAAACACGCGCAGGGCCACGCCCAGGCAAATGCGGCGCCGGC
AGAAGTCCCCATCCTGGGCCCATGCCCCTCGCAGGAAGGGGACAAAGAGG
AAAGACGGGGAGGACAAGTGCACGCTGGCCCCCGTCCTCATTACCTGCTG
ACTCTCCTGGAGGAAGGCGACGATTTCTACCTGCGCACCTCCCTGGACGC
CACGCGTTGTGGGAACGTCTCTCGTTTCTTCAACCACTCGTGCGACCCGA
ATATGCACGTGGTCTGTGTTCGGAACGGAGGCCTGCTCCCTCGCCTCTGT
TTTTTCACGCAACGGCGTGTGCATGCGGGCGACGAGCTGACGTTTGCGTA
CGGGGAGAGGGAGGAGAACCACGCTTCGAAGGGAGGAGTCAAGGTTGAAA
GTGGAGCTCGCTGTGGCCGGTCATGTGCAAAGGGGACCATATTGCCCCAA
TCACAGTCGGGCAGGCCGTGCTGGTGTGGTTCGGAGAAGTGTGTGGGAAA
TTTGCCGTATCAACCAGGGCTGTAAATGTTGCCAAGGACATGTGTGTTTT
AAAGTAAAACACGTCG back to topprotein sequence of rna9656 >rna9656-protein ID=rna9656-protein|Name=rna9656|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MDDVEKKTCRKSMNRKAFDLKKIRTFPARPQGGGKRLENILHRFILVDSY
KQACQHYVHVVCYKSAQDTVETQPPRGVLQKCTGHCRDATYLVDVIFSYF
AMRFGMPFDLYTQSVYV back to topmRNA from alignment at KK037255.1:74390..75940- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9656 ID=rna9656|Name=rna9656|organism=Nannochloropsis gaditana|type=mRNA|length=1551bp|location=Sequence derived from alignment at KK037255.1:74390..75940- (Nannochloropsis gaditana)
AGACACTCTTTCCATTGCCCGGCCGAAGGCAAATCCGCCAAGGAAAAAGA
CCGTGGCCCCATTGTCAGGGTTCACCCACGCCAGGAACCATTTGGTCATC
GTGGTCGTAGTGGGAGTGGCAAATGAAGCAGCAAGTGTCCAATCAGTGAG
TTAAAAGCAAAAATAAGCTTAGAGAAAACCATGCGTACGTGTTCTTTTCT
CCTCTCGGCACATGCACTCTGATCGGAACCTGAGAGTCCCCCTTTCTCTG
AGCGAAACTTCCGCCTTTGCCGCTATCTTCTCAGCGCTTTTCACGCCAGC
ATGTCTTCGTGTTTGTAAAAAGCGACAGGTTCTGAAAAGTTTGGCTGCAA
ATCTGGATGCTTAGCGAGAGTTTCCGTTGCTTTGTGTCTTATACGGCCGA
GATTCGGTGAAAGCACGAGAAGTACGCATGAGCCTAGCACACCTTCAAGG
TTCTCGGCACCTTCGGCACCTCTCCTGCTTGGCATATACTCGTTCGAGTA
GGTGGTACGTGGCATGTCTTCTCGCGTAGGGTCTTCTCATGGCTCACACA
TGGCACGGTTGCTACCGTCGTCCAGGGATATGACTGCATGTTCTCGGCGT
TATATGTGACTTCAGGGGGTTGGGGCTGAGGACTAATGTGCAGCGTATCA
AACAGCGAAGTTGTACAGTGATCACCCGCATTGTATGGCGCCCATGATCC
CTTTTTTGCACCACTGATCGGATCAGTTCTGTTACACCATGTCACGAGGA
GGTGGGAGCGCGACATGAAGCGGGCTGATCGTGTGGTCGCCGGCTATGTC
ACCCTGTCCTTAGCACTTTTGTGCAGAGGAGGCATCAACGACGTTCTCCC
TTTACATCGCTGTGAGACACGACTTGTAGGAGGAGTTCACATCTCCAATC
GCTCATATATCCTGTCAGACGATCCCTTTTGCCTTTGAATCGATTACGAA
TTTTCTTTTTTATTTGTCGGAACGATAGAGACTGTGATCGTTTCACAGTA
GCAGCGGAATCCGCTGCCCCGTGAGCGGGAGTGGCCGCTATGGACGATGT
GGAGAAAAAAACGTGCCGCAAATCGATGAATCGAAAAGCTTTTGATCTGA
AGAAGATAAGAACATTTCCGGCAAGGCCACAGGGGGGGGGAAAGAGATTG
GAAAATATTTTACATCGGTTTATTTTGGTAGACTCTTATAAGCAGGCGTG
TCAACATTATGTCCACGTGGTGTGTTACAAAAGTGCACAGGACACTGTAG
AGACGCAACCTCCACGTGGTGTGTTGCAAAAGTGCACAGGACACTGCAGA
GACGCAACCTATCTAGTTGATGTCATATTTTCTTATTTTGCCATGCGGTT
CGGTATGCCGTTTGATCTTTATACACAGTCTGTATACGTATGATGCTGTC
ATGCGTGCAAGCACTTCGATCACGGTGCCTTTTTTGCGATAGAACGACAT
AACCGACCGAAAGGAAACGAGCCGCAGGCAATTCTTACAACCAGTTCCAT
GACAAGTCGAAAAAAGAATAAGACCCCCCAAAAAACAAGTACGCTCGGCT
A back to topCoding sequence (CDS) from alignment at KK037255.1:74390..75940- >rna9656 ID=rna9656|Name=rna9656|organism=Nannochloropsis gaditana|type=CDS|length=354bp|location=Sequence derived from alignment at KK037255.1:74390..75940- (Nannochloropsis gaditana)
ATGGACGATGTGGAGAAAAAAACGTGCCGCAAATCGATGAATCGAAAAGC
TTTTGATCTGAAGAAGATAAGAACATTTCCGGCAAGGCCACAGGGGGGGG
GAAAGAGATTGGAAAATATTTTACATCGGTTTATTTTGGTAGACTCTTAT
AAGCAGGCGTGTCAACATTATGTCCACGTGGTGTGTTACAAAAGTGCACA
GGACACTGTAGAGACGCAACCTCCACGTGGTGTGTTGCAAAAGTGCACAG
GACACTGCAGAGACGCAACCTATCTAGTTGATGTCATATTTTCTTATTTT
GCCATGCGGTTCGGTATGCCGTTTGATCTTTATACACAGTCTGTATACGT
ATGA back to top
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