rna9645, rna9645 (mRNA) Nannochloropsis gaditana

Overview
Namerna9645
Unique Namerna9645
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length903
Alignment locationKK037255.1:45610..47290 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100654g5.6017.mrna
Orig protein idgnl|cribi|Naga_100654g5.6017
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:45610..47290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100654g5gene9365Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21059.1cds9614Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9645rna9645-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9645 ID=rna9645|Name=rna9645|organism=Nannochloropsis gaditana|type=mRNA|length=903bp
ATGCTGGTGGTGCGGCAACTCTCGGCGGGTGTCCGAGGCAGATGCGGGCA
GAGGCAGGGGCAGCAGAAGGGAGGGCGCTATCTATCGGGCAGCACAGGGA
GCAGCAACACAAATGGTGAAGTGTACTGGGGTCGGCAATGGGAGAAGGCA
AAGGAGGCAGCCCCCGTCATGCTAAGTGTCATTGGCTTTGTTGTAGTGAT
TTCGGAAGGAACTCGGCTACAGGTGGAAGCGAGGACGAAATTGAGCATGC
AAGAGACGATATTGCGCCTGGAGCAGGAGACGAAGCAGGCGGAGCAGGAG
ATTAATGATGCGGTGCTGCGAAGAGAGATGGCGAAGAAGCAGGCGGAGCA
GGAGAAGAAGGATGCGGTGCTGAGAGGGGAGCTTGAAAAGAAGGATGCGG
TGCTGAGAGGAGAGATGGAGGAGAAGTATGCGGTGCTGAGAGGGGAGCTT
GAAAAGAAGTATGCGGTGCTGAGAGGGGAGCTTGAAAAGGATGCATTGCG
GGCGGGGCAGGTGGACGGACGGATTCTCGATCTCTTGACGCAGGGGGATT
ATGAGCGGGCTCGGATACTGTTGAAGGAGCGAGCAAACGGTCACGTGACT
GGCGGCTCTGTCGTGGTGAGGGTGGTCTGCAGCCTCCTTTCTGTCACTGC
GTCCATATCTGACATTTACCGACATGACAGAGACAGAGAGAAAGATGTTG
CCGGGGGCGGCGCATCGAGATGGAGCTTGTTTGTCATGATTGGCAAGGAG
GGGCAACACATGACGAGGAAGGAGGGGAAAATGGCAGTGGAGGATGCGGT
GGGGTTGAAGTATGTACATTGTGAATTGGAAAGCAAGGGCAAGGGCCCGC
AGCGAAGGCTTTTTTGTGGAAAGACACGAACAGCGACATACATAGCAAAA
TAA
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protein sequence of rna9645

>rna9645-protein ID=rna9645-protein|Name=rna9645|organism=Nannochloropsis gaditana|type=polypeptide|length=137bp
MCTVGVVLKQYNLQINGISNSLCNFLRPRVAKFVYDTRRPAKRHIFDRES
ITCGLHSVHVPVLLRQPKKRLIGGMASPFHRHANGLMPASTPSPGAGISW
HVFPRTCSTPSPASTTASTQHQPYTAYNPSKSAEPYL
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mRNA from alignment at KK037255.1:45610..47290-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9645 ID=rna9645|Name=rna9645|organism=Nannochloropsis gaditana|type=mRNA|length=1681bp|location=Sequence derived from alignment at KK037255.1:45610..47290- (Nannochloropsis gaditana)
GGATGCTTCGTGTGTTTTATTGGGGGGGGAGTGGGAGAGCTGCAGTATGG
AGCTTGGGAGGGAGATGGCGTGACCGTTGTTGTCCTTCAAGGTGTGTTTC
TTGGTCGGCACGTTGCCTGTGATAGCGCCTTCCCGGCTAGCTGTGTGCTG
ACCCTCCTGCTCCTCTCTTTGTTGCCCCCCTTATCTTGCCCAGCATTTCG
ACCCGTATTATCAACGAGGTCCAGGGGATTAACCGGTGCGCTTATGACTG
TTCATCCAAGCCCCCCGCGACCATCGAGTGGGAGTAGGTGCCCGGTCGTG
TAAGGGAGGAAGGAGAAGCATAGATGCCAAGACGGAAAGGAAGGAGGAAG
GAGGTGGTCGTGGAGGGATCTCAGAGGAGGGAGCACAGGAACAGGAAGCC
TTAGTAGGGGAGAAAGGGGGCCGCCGGTTATCAGCTGGAGAGGTAGAACA
AGCGGGCTTGGACACGTACTTTCCTGGTGAGATGGTAGGCACGGTGCTGG
GGGGGAACCGTCATGACGCCTGGTGGTTTGTAGTTGAAGAAAGCAATATG
AGGGAATAGAGTCTCACGGACATGCATCGGCATGGAGTGTGCCATGACAA
CATTGCTCTCTTCCAGATTCGTTGCCCTTCCTTGTTTGTTTGGAGGGAAA
GCGCCTTGAACTTAATTTGATAAACTTCGCATAGCAAGACGAAGATAAAA
ATACAAACAGTAAGCCAATACTCACCATTATGGCATATAAAGAGTGTGCA
CCTTGATTATCTGATGGATGAGAGAGATGGACGCTTTGCTGCTTTTCACT
CATGAATCAATCAATGTCACCGTCACGCTGACAGGTTTGGAGATATGTGT
ACTGTAGGTGTTGTCTTGAAGCAATACAACTTGCAAATAAACGGAATCTC
GAACTCCTTGTGTAACTTTCTTCGTCCGCGAGTCGCCAAATTTGTTTACG
ATACCCGGCGGCCGGCCAAACGGCACATTTTCGACCGCGAATCCATCACG
TGTGGTCTGCATTCCGTACATGTGCCTGTACTTCTCCGGCAGCCAAAGAA
GCGACTTATTGGCGGGATGGCGTCACCGTTCCACAGACACGCCAATGGCC
TGATGCCGGCATCTACCCCGTCACCCGGGGCGGGCATTTCGTGGCATGTG
TTTCCTCGGACTTGCTCAACACCCAGCCCAGCATCAACTACAGCATCAAC
ACAGCATCAACCCTACACTGCCTATAATCCCAGTAAATCGGCCGAACCCT
ACCTATAGGCCTTGATGAGGGTAGTGGGGGCAGGCAGTGATTGGAACTCT
CACCATGCTTTCCTTGTCGAAAGTCTTCAGGGGGAGGTGGTAGAAGATGG
AGGAAACCATCCAACCGAGAAAGCGTTGGGAGGTATAGTAGGAATGAGAG
GGGGTGGAGGAAAGGAAGGAGGGAGAGAAGGGAAGCAGGAGATGCAGTTG
TAAGGGAATGCGTTGAATTTGTGAGAGTGAAAGAGGACGCACAGAGAGAG
GAGAAAGAGAAGGAGCGCTGGAAAGAAAAGGAGGAAGAAGAGCTGAAAAA
CCAGCGTAGCGCGTTATTTTGTCTCTTGAGTGCATGTGTGTGAACGTGTA
TGCACGTGGAACGAAAATGAAGAAGGGGCCTGTGCAAGTCAACGATAGAA
GAAATCAAAGGGTCCTGTTATGTGAATTGAT
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Coding sequence (CDS) from alignment at KK037255.1:45610..47290-

>rna9645 ID=rna9645|Name=rna9645|organism=Nannochloropsis gaditana|type=CDS|length=414bp|location=Sequence derived from alignment at KK037255.1:45610..47290- (Nannochloropsis gaditana)
ATGTGTACTGTAGGTGTTGTCTTGAAGCAATACAACTTGCAAATAAACGG
AATCTCGAACTCCTTGTGTAACTTTCTTCGTCCGCGAGTCGCCAAATTTG
TTTACGATACCCGGCGGCCGGCCAAACGGCACATTTTCGACCGCGAATCC
ATCACGTGTGGTCTGCATTCCGTACATGTGCCTGTACTTCTCCGGCAGCC
AAAGAAGCGACTTATTGGCGGGATGGCGTCACCGTTCCACAGACACGCCA
ATGGCCTGATGCCGGCATCTACCCCGTCACCCGGGGCGGGCATTTCGTGG
CATGTGTTTCCTCGGACTTGCTCAACACCCAGCCCAGCATCAACTACAGC
ATCAACACAGCATCAACCCTACACTGCCTATAATCCCAGTAAATCGGCCG
AACCCTACCTATAG
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Synonyms
Publications