rna9638, rna9638 (mRNA) Nannochloropsis gaditana

Overview
Namerna9638
Unique Namerna9638
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length468
Alignment locationKK037255.1:32823..33793 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101180g2.9041.mrna
Orig protein idgnl|cribi|Naga_101180g2.9041
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:32823..33793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101180g2gene9358Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21065.1cds9607Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9638rna9638-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9638 ID=rna9638|Name=rna9638|organism=Nannochloropsis gaditana|type=mRNA|length=468bp
CCTCCCTCTTTCCCTCCCTCCGCTCTCCCATGGTGATGGCACTCGGCATG
TCTCCAGTGGAAGGTCTTCATATGTATTTTACCACGGGGAAGCATCTAGG
GGATGTGATGTGCGGCTTTGATGTGGATTTGATCATTCTGCCTGCGCGTG
GGAGAGAAGGACGCGAGGAGCCAGTCAGGAGGCTCCGAGGGAGGGGAAAA
AATCAAGGTCAAAGGGGGGACAAAAGGCGGGAAATGCTTCCTTTGAAAAG
CAAGCAAACTGTGTCAAGACTCACTTAGCATATGGATTATCGCTTCTTCT
TTCCCGTGTCTCTGTCGCCGAATCGATCACTTTCCCCCGGCCGATCGCTG
AACTTCCCTCCCTCTTTCCCTCGTAGAAGATCGCTCTGAAGGATGATCCG
CCTCCCTTCCCTCCTTAACACGGCCTCTCCAGCCCCCCCCCCCACCCCTC
CCTCCCTCCCTCCCTCCC
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protein sequence of rna9638

>rna9638-protein ID=rna9638-protein|Name=rna9638|organism=Nannochloropsis gaditana|type=polypeptide|length=239bp
MYFPGGGGGREQRGGGRLDPADAWRTWWEGEGGGQEGGGGGGGGFGFFAG
LGAHGVPFAGMSPPFGGYRTGIMEFPLPLLHLPRLISFPTRHRPSPSRMC
TGRSSPLLPPSSSDDPLGSSHFTVLLLALPPVCFLPLPLPLFVFFPPLPH
PLVFFFPQASPCPGSRAREGRNVSREAGEGGGETRDGSEGREGSRCLLHL
RFLTFLPPSFPPSLPPSLRASSRETTSSCVCSDAQSDAG
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mRNA from alignment at KK037255.1:32823..33793-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9638 ID=rna9638|Name=rna9638|organism=Nannochloropsis gaditana|type=mRNA|length=971bp|location=Sequence derived from alignment at KK037255.1:32823..33793- (Nannochloropsis gaditana)
CATTATCCCCGTGCTTCACTCGGTGCTGCTGATCCTCCTTGCTCTATTCC
CCTCCCCTCCTCCTGCTACCACAGCTGCTTGGCCACCAATGTTAAGTGTG
CCTTTCGTTGGTGTCATCGATAAAATTGAGAGCTGAGATGTATTTCCCCG
GGGGCGGCGGAGGAAGAGAACAGCGTGGTGGCGGCAGACTCGACCCTGCG
GATGCGTGGAGGACTTGGTGGGAGGGTGAAGGAGGAGGGCAAGAAGGAGG
AGGAGGAGGAGGAGGAGGGTTCGGGTTTTTCGCCGGGTTGGGGGCACACG
GGGTCCCTTTCGCTGGAATGAGTCCTCCTTTTGGTGGGTACCGGACTGGG
ATCATGGAGTTTCCCCTCCCTTTATTGCACTTGCCACGCCTGATATCCTT
TCCTACCCGCCACCGTCCTTCTCCCTCTCGGATGTGCACGGGCAGATCAA
GTCCTCTCCTCCCTCCCTCCTCTTCCGATGATCCCCTGGGCTCCTCACAC
TTCACCGTCCTTCTTCTTGCCCTCCCCCCCGTCTGTTTCCTCCCCCTGCC
CCTCCCTCTCTTCGTCTTCTTTCCTCCCCTCCCCCACCCTCTCGTCTTCT
TCTTTCCTCAGGCATCCCCGTGCCCCGGGAGCCGAGCGAGAGAGGGCCGG
AACGTGAGCAGGGAAGCGGGTGAAGGAGGAGGGGAGACGAGGGATGGTAG
CGAGGGGAGGGAGGGAAGTAGGTGCCTTCTCCACCTTCGCTTCCTGACCT
TCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTTAGGGCCTCT
TCAAGAGAGACCACCTCCTCCTGCGTCTGCTCGGACGCTCAATCGGATGC
CGGGTAAGGAGGGAGAGAGGGAGGGATGGAGGGATGGAGGGATGGCAAGA
GGACATAAAGAAGGTAACGGCCCCGAGGGAGTGAATGCGGGAGAGGTGAT
AGATATTGCGCATCCTTTCGG
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Coding sequence (CDS) from alignment at KK037255.1:32823..33793-

>rna9638 ID=rna9638|Name=rna9638|organism=Nannochloropsis gaditana|type=CDS|length=720bp|location=Sequence derived from alignment at KK037255.1:32823..33793- (Nannochloropsis gaditana)
ATGTATTTCCCCGGGGGCGGCGGAGGAAGAGAACAGCGTGGTGGCGGCAG
ACTCGACCCTGCGGATGCGTGGAGGACTTGGTGGGAGGGTGAAGGAGGAG
GGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGGTTCGGGTTTTTCGCCGGG
TTGGGGGCACACGGGGTCCCTTTCGCTGGAATGAGTCCTCCTTTTGGTGG
GTACCGGACTGGGATCATGGAGTTTCCCCTCCCTTTATTGCACTTGCCAC
GCCTGATATCCTTTCCTACCCGCCACCGTCCTTCTCCCTCTCGGATGTGC
ACGGGCAGATCAAGTCCTCTCCTCCCTCCCTCCTCTTCCGATGATCCCCT
GGGCTCCTCACACTTCACCGTCCTTCTTCTTGCCCTCCCCCCCGTCTGTT
TCCTCCCCCTGCCCCTCCCTCTCTTCGTCTTCTTTCCTCCCCTCCCCCAC
CCTCTCGTCTTCTTCTTTCCTCAGGCATCCCCGTGCCCCGGGAGCCGAGC
GAGAGAGGGCCGGAACGTGAGCAGGGAAGCGGGTGAAGGAGGAGGGGAGA
CGAGGGATGGTAGCGAGGGGAGGGAGGGAAGTAGGTGCCTTCTCCACCTT
CGCTTCCTGACCTTCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTC
CCTTAGGGCCTCTTCAAGAGAGACCACCTCCTCCTGCGTCTGCTCGGACG
CTCAATCGGATGCCGGGTAA
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Synonyms
Publications