rna9634, rna9634 (mRNA) Nannochloropsis gaditana

Overview
Namerna9634
Unique Namerna9634
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length562
Alignment locationKK037255.1:25516..26330 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101707g1.7141.mrna
Orig protein idgnl|cribi|Naga_101707g1.7141
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:25516..26330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101707g1gene9354Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21070.1cds9603Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9634rna9634-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9634 ID=rna9634|Name=rna9634|organism=Nannochloropsis gaditana|type=mRNA|length=562bp
AGCACTTCGTCATGACATCGCGGTACATGACATCGAGATATTCCTAAGGA
TAACTCTGATTTATCTGATACCTGGTTGACTGAGCAGGCAAAAAGAATGT
AAGTCGTCGCTGTAATGGCCACCGGCAGCCCGACTTATCACGACTTCCTC
CCGACCCCCCCAACCCCAGATCAAAGCCGCTCAAGTCTGTTACCGTCGTC
AGACCAAGTCCATTATGGCTTCGTCTACTGTAAAAAGATTCGTGCGTCGA
CAGCAACGCAGTCGGCGCTCTTTTTTCCAACGATCTTCCGCCTGTTTGCT
CCTGCTTGGCGTGCTGCTCTTCTTTTTCCCTCTTATGGTGAGGGCGGAAG
GAGAGGCAGTGGCTCCCGCGCCTGCGGAAGGTCAACAGGCGGCGCCTGTG
GAAGGTCAACAGGCGGCTCCAGCTCCTGCCGAAGCGCCTCAGGCAGAAGC
CCCGCAAGAGCCGGGACAGGCGGCTCCGGAAGCCGTCGAGGCTGGTTCAG
ATTCAGCGACGTCCGTGATCATGGAGCTCGAGAAGGCGTTGAACGGTAAG
TCTTTTATCCCC
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protein sequence of rna9634

>rna9634-protein ID=rna9634-protein|Name=rna9634|organism=Nannochloropsis gaditana|type=polypeptide|length=179bp
MLKKDVEEEEEEEEEEEEEEEEKEEVRTVASSASFPMLTAEKISPRDNGE
GKQRRECARRVERSSGRGVWGGIGQGWEVDRLRAPEGMEDAQRAEKDPLD
RRIARLLALGRRGGDGQGLREVLKLLPPSLPPSLPPSFPPSFPSSLLPSL
FPFFPPSPSFSPSIFLFRTFLFHFPSLFP
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mRNA from alignment at KK037255.1:25516..26330-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9634 ID=rna9634|Name=rna9634|organism=Nannochloropsis gaditana|type=mRNA|length=815bp|location=Sequence derived from alignment at KK037255.1:25516..26330- (Nannochloropsis gaditana)
AGCTGCCTGGCAAAGGTTTGCTTGCCACAGGGACGTGGATGTGCGCGGGA GGTGGGGGGCGAAGCCATAGCCGTGGGCAGATGGCAATATAAAACAGGCT TTTAACCTCTCCATCAGGACAGCGTGAGAAGCACGGAGGGAGGTATCGTA CCCATTCATGAGCAAAACGCGCAATCTGTGGCTACAATCCTTTTCCTGCC GGTGAAAAAATTGTGGAGTGCACACAGCAAGTGATATTTGTCCTGGGTGG TGTCTTTCTTCAGGCGAGGTTTAGCAAATGCTGAAAAAGGACGTGGAGGA GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGG AGGTTAGGACCGTAGCGTCCTCTGCATCTTTCCCAATGTTGACCGCGGAA AAAATCTCTCCGCGCGACAATGGTGAAGGGAAGCAGCGAAGGGAGTGCGC CCGACGTGTGGAAAGAAGCAGCGGTCGTGGGGTGTGGGGGGGCATCGGGC AGGGATGGGAAGTAGACAGGCTGCGCGCACCGGAAGGGATGGAAGACGCA CAAAGAGCGGAGAAGGATCCTTTAGACAGGAGGATCGCTCGATTGCTTGC CCTGGGACGGAGGGGAGGCGACGGACAAGGACTGCGGGAGGTACTCAAGC TCCTCCCTCCCTCCCTGCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCT TTCCCTTCTTCCCTCCTTCCCTCCCTCTTTCCCTTCTTCCCTCCTTCGCC TTCTTTCTCCCCTTCTATTTTTCTTTTCCGGACCTTTCTGTTTCATTTTC CCTCACTTTTTCCCT
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Coding sequence (CDS) from alignment at KK037255.1:25516..26330-

>rna9634 ID=rna9634|Name=rna9634|organism=Nannochloropsis gaditana|type=CDS|length=538bp|location=Sequence derived from alignment at KK037255.1:25516..26330- (Nannochloropsis gaditana)
ATGCTGAAAAAGGACGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGAAGGAGGAGGTTAGGACCGTAGCGTCCTCTGCAT
CTTTCCCAATGTTGACCGCGGAAAAAATCTCTCCGCGCGACAATGGTGAA
GGGAAGCAGCGAAGGGAGTGCGCCCGACGTGTGGAAAGAAGCAGCGGTCG
TGGGGTGTGGGGGGGCATCGGGCAGGGATGGGAAGTAGACAGGCTGCGCG
CACCGGAAGGGATGGAAGACGCACAAAGAGCGGAGAAGGATCCTTTAGAC
AGGAGGATCGCTCGATTGCTTGCCCTGGGACGGAGGGGAGGCGACGGACA
AGGACTGCGGGAGGTACTCAAGCTCCTCCCTCCCTCCCTGCCTCCCTCCC
TCCCTCCCTCCTTCCCTCCCTCTTTCCCTTCTTCCCTCCTTCCCTCCCTC
TTTCCCTTCTTCCCTCCTTCGCCTTCTTTCTCCCCTTCTATTTTTCTTTT
CCGGACCTTTCTGTTTCATTTTCCCTCACTTTTTCCCT
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Synonyms
Publications