rna9630, rna9630 (mRNA) Nannochloropsis gaditana

Overview
Namerna9630
Unique Namerna9630
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1805
Alignment locationKK037255.1:9745..10523 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101104g1.8521.mrna
Orig protein idgnl|cribi|Naga_101104g1.8521
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:9745..10523 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101104g1gene9349Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9630rna9630-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21074.1cds9599Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9630 ID=rna9630|Name=rna9630|organism=Nannochloropsis gaditana|type=mRNA|length=1805bp
CGCCTAGAAAAAATGGCCACGCACTACAGGTAGAGAAAGCCACATGTTGA
CGAAGGTGCGGCACATTGACCGTCGTGATGTTTTTGCGATTGCGGTGGGA
TGTGAGTTTCTTTGCTTTTATGGATGTATATTGACTGTGCGTCCACTGGG
CATCACGACACTGCCATTGCGCAGGACACCACCCCTTCACACCCTGAGAA
GCTTCTTTTCCGGCGTATTTTACGAAAGCTACTGGAGTGTTTCCTGCGTA
TTCTTGGGACACCAAGATTGATATGATATAGCTGTATGCATGTGGAGGGA
ATGAGAGCGGTACCGTGCAAAGGCAAATGATGTAAAGATGTTTTTTTTTT
TCCTGAGAAGAAAGAACCGAGAAAAGCAAACAACGATGGTGCATGTGAAT
GCACAAGAAAATGGATGGAGTAAACGGAGAACGTATTCTCTCTTGTAGTT
TATGGTCGATTAATCAAGAAAATTTCCAACCATTCCTAGCCTCCACATGC
ATGTGAAGGTTCGTATCCTCGTGAGAGAGGGAAGGCTTTCGGGAGGACAG
ATAGTCATTTCCTGCAAATATTCAACTATTCATCTGGGAGCCTTACAAAT
TTGGCATGTAATTCTTTGAGCAGACATCTGTTACTTTTGACGTGGTGATC
GACGTTGAATTCCTCTACGCACTCTCATATATTGATCTCACAATCATTTT
AGGGTGAGATTCCCACACTGGTTGAAAATAGGAGTGAACAGTCTGCACGA
CGAAATGTGATACAACAATGACATGTGCCATAACAACATTAACTGAGATA
CCCTTGAGGGAAAAAGACTGATGTCCCAGGCGCAGGGTCTTTGATTTTAG
TCAGCGTCTCGCACCACCACGCGAACTTCACACGGTTCTGTCGACTGCCT
AATAGAAATTTTCATTTTATGTCAAACCTTTGTACTTTGCGGTAGAATTT
TGATGTCCACCTCACCAGCCCTTATCCACATTCGTAGACCAGCGTGTGGC
ACGTACGCATCACATCCTCCTTTTCCATGTGCTTCTGTCCACAAAATAGA
TGCATATATGTAGCCAGTAGCTACTGCCGAGGGTCCGTGTGATTGCCGCT
CCTCACAACTCGAAATAAAACCAGACTTTCCAGGAGACTGGCTTTCCCGT
CTGGTGTAATCATTCCTTGAAGCAAAAGCAGGAAATTTGCCTTGGTATGG
TAGCCACACGGGCCTCGAATAGGAGGAGCGTCACCAACAACGATCATGCG
GCAGTAGCAGACACCCCAGCAGGACCTGAAGTCCTACAATCACGTTTCCC
CCTCAAAAATCAGCCCCAAAGCACCCAAAAGCGACGGAAAGCACCACCAA
GAAAGGACGCGGCGGTGCAGGCGGAAAAAAACCCGTCACTCCTCGAGCCG
GCACCGCCTCCCGCGTCCTCTCCCTTTCCTTCTCCAAGCTCAAGCTCCTC
CTCCTCCTCCTCCTTCTCCTTCAACATCACGTCCCTCACCATCATACTCT
TCGCTCTAGTCGTGCGCCATGCTGTCTCCCTCCACTCCCACTCGGGCATG
CACACGCCGCCAAAATACGGAGATTACGAAGCTCAACGGCATTGGATGGA
GATCACACTCCACGTTCCACTCAAAGACTGGTATTCCCTCCCTCCCTCTC
TCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCT
CTCTTTCCCCACCGTCTTCCTTTCTCTCTATCCCCTATCATTATTCCCCC
GATCCACGTATATTTCCTAAAAAAGACAATGACGCAGCCGCTGATAGGAA
GCTAA
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protein sequence of rna9630

>rna9630-protein ID=rna9630-protein|Name=rna9630|organism=Nannochloropsis gaditana|type=polypeptide|length=108bp
MKREKGAKQSASGNPALYEPPPFSNLSGPYPSRNAIHRTRIPCRLLILFL
CTLVVMGILTLLFITLLPGVVSDGIRISQPYLLNHEPQVGSDAPFPPLAT
TARQGPSR
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mRNA from alignment at KK037255.1:9745..10523+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9630 ID=rna9630|Name=rna9630|organism=Nannochloropsis gaditana|type=mRNA|length=779bp|location=Sequence derived from alignment at KK037255.1:9745..10523+ (Nannochloropsis gaditana)
CCACAGGCAATGGTCACAAGAGACTATTTGTAGGACTGATAAGGTTTGTT
AGTCTGGCAACTTCATCCTATGCATAAGCTGCCCGTGATTGGGCGTCAAT
TTTCCATCACCTACATGCTTTGAAGCGAACACAAGAGTCAAGATGAAGCG
CGAGAAAGGAGCCAAACAATCAGCCTCAGGAAATCCAGCTCTCTATGAAC
CACCACCGTTCTCAAACCTGTCGGGCCCATACCCCTCCAGAAATGCGATA
CATCGAACCCGCATACCCTGTCGGCTGCTCATCCTATTCCTCTGCACCTT
GGTGGTGATGGGGATCCTTACACTACTCTTCATCACCTTACTGCCCGGTG
TCGTTTCTGACGGTATCAGAATTTCCCAACCCTATCTTCTCAACCACGAG
GTACGTAGTGTTATAAATAAACacgagtgggaggaaaacGCCTTTAGGAA
CCGAAGGGTGGAAAGGTcctgggcgggcgggcgaaTAGCCTGGGGACGGT
TCggccctccaagcccatcACTTGTCCCGTAACGGTCTCACGGCCACAGA
TCTCTTGTCGAGGCACGTATATTTTCAATATAATATATCTATAATATTTA
TGTGTACTACACCCTCTCGACCTCCGGCTCTCATGCCCACCTGGATAGCC
CCAAGTCGGGTCGGACgcgccgtttcctcctcttgcaacGACCGCCAGGC
AGGGACCGAGCAGGTAAATAAAGAGACGAAGAGAAGCCATGCGATAAGCG
ATACAGTGAAAGAGAGTGATCGCATATCC
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Coding sequence (CDS) from alignment at KK037255.1:9745..10523+

>rna9630 ID=rna9630|Name=rna9630|organism=Nannochloropsis gaditana|type=CDS|length=654bp|location=Sequence derived from alignment at KK037255.1:9745..10523+ (Nannochloropsis gaditana)
ATGAAGCGCGAGAAAGGAGCCAAACAATCAGCCTCAGGAAATCCAGCTCT
CTATGAACCACCACCGTTCTCAAACCTGTCGGGCCCATACCCCTCCAGAA
ATGCGATACATCGAACCCGCATACCCTGTCGGCTGCTCATCCTATTCCTC
TGCACCTTGGTGGTGATGGGGATCCTTACACTACTCTTCATCACCTTACT
GCCCGGTGTCGTTTCTGACGGTATCAGAATTTCCCAACCCTATCTTCTCA
ACCACGAGCCCCAAGTCGGGTCGGACgcgccgtttcctcctcttgcaacG
ACCGCCAGGCAGGGACCGAGCAGGTAAATGAAGCGCGAGAAAGGAGCCAA
ACAATCAGCCTCAGGAAATCCAGCTCTCTATGAACCACCACCGTTCTCAA
ACCTGTCGGGCCCATACCCCTCCAGAAATGCGATACATCGAACCCGCATA
CCCTGTCGGCTGCTCATCCTATTCCTCTGCACCTTGGTGGTGATGGGGAT
CCTTACACTACTCTTCATCACCTTACTGCCCGGTGTCGTTTCTGACGGTA
TCAGAATTTCCCAACCCTATCTTCTCAACCACGAGCCCCAAGTCGGGTCG
GACgcgccgtttcctcctcttgcaacGACCGCCAGGCAGGGACCGAGCAG
GTAA
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Synonyms
Publications