rna9610, rna9610 (mRNA) Nannochloropsis gaditana

Overview
Namerna9610
Unique Namerna9610
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length955
Alignment locationKK037254.1:279999..280256 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100776g3.10773.mrna
Orig protein idgnl|cribi|Naga_100776g3.10773
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:279999..280256 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100776g3gene9328Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9610rna9610-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21092.1cds9579Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9610 ID=rna9610|Name=rna9610|organism=Nannochloropsis gaditana|type=mRNA|length=955bp
CCGAACGAGCTCATGGAGTGTGCGCGCCTCAAGCCTGGCAGCGGGGCGGG
ATCGATTGCTTTTATCTGGGTCGATTGCCTCTACTTTGACCCCTCGCTCT
CTGTCTCTCGCTCCCAGCCCCGTCACTCCTGCCTCGTAGGGGTCAATTCC
ACCGCATTTCTGTCAACTCAGGAGGGACGGACATCTGTACAGCGCTGTCT
TTGTTGGATTCTCACATTTTAATCAGTTGTCCAGGCAAGAAGCGCCTCCC
AAAATAGTGGCAGGCCACTGTAGCCACTCGCTACTGCTGTATTAGCATCA
TCATTTGGAGCTGTGGACACTATTACCCAGCGCGGATATTGCAACGATAG
CAGGGGGCCACAGCCGTTCCTCTCTTCCTCCCTCGCCTTCCTGTACGGTC
GTGACTCTAGGAGTTTCTGGAGGCCCTTGAGTTTGAAAGGGTCACCGATA
GCATCATTTCAATCCAATCTTGACGCAGAGGCCCGAGCAGCAAGCATGGG
AGACTTCTCGCGCATCCAGAAGGAGCTCAGGGAGTGCGCCAAAGATCAGA
AGTCCGGGGTCACAGCAAGCCCAGTAGGCTCTAGCCTCAACCACCTCTCT
GGCACCATCACGGGTCCCGACGGGACCCCCTACGAGAAAGGCGTCTTCAA
GATCGACATCCAGATCCCAACCTCCTACCCCTTCGAGCCCCCCAAAATGA
AGTTCGTCACCAAGATTTGGCACCCGAACATCTCCTCCCAGTCGGGAGCG
ATATGCCTGGACATCCTCAAGGACCAATGGTCGCCCGCCCTCACCATCAA
GACCGCGCTCATCTCCTTGCAAGCCCTGCTCTGTACACCCCAGCCCGTGA
GAGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGCAGGGAGGAAG
GGTCGCGTGACGTGTATGGGCCGGGCGGGAGGGCCATGGCCATGATATTT
TTCGA
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protein sequence of rna9610

>rna9610-protein ID=rna9610-protein|Name=rna9610|organism=Nannochloropsis gaditana|type=polypeptide|length=85bp
MLCLLMTSPLPNPLQSFTLKDTQGSGGIPRHHPAREAWHGGSPLPTPMFG
TDWKGVWVSEGLSIFPARRARAGDAGECLRASTVA
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mRNA from alignment at KK037254.1:279999..280256+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9610 ID=rna9610|Name=rna9610|organism=Nannochloropsis gaditana|type=mRNA|length=258bp|location=Sequence derived from alignment at KK037254.1:279999..280256+ (Nannochloropsis gaditana)
ATGCTTTGCTTACTAATGACGAGCCCGCTCCCTAACCCTCTCCAGTCCTT
CACACTGAAGGACACACAGGGCTCTGGTGGCATCCCTCGACACCATCCTG
CCCGCGAAGCATGGCACGGCGGCTCTCCATTACCGACACCCATGTTTGGG
ACCGACTGGAAGGGTGTATGGGTAAGCGAGGGGCTTAGCATCTTCCCGGC
ACGGAGAGCACGTGCCGGGGACGCAGGAGAGTGCTTAAGAGCCTCGACTG
TGGCTTAG
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Coding sequence (CDS) from alignment at KK037254.1:279999..280256+

>rna9610 ID=rna9610|Name=rna9610|organism=Nannochloropsis gaditana|type=CDS|length=258bp|location=Sequence derived from alignment at KK037254.1:279999..280256+ (Nannochloropsis gaditana)
ATGCTTTGCTTACTAATGACGAGCCCGCTCCCTAACCCTCTCCAGTCCTT
CACACTGAAGGACACACAGGGCTCTGGTGGCATCCCTCGACACCATCCTG
CCCGCGAAGCATGGCACGGCGGCTCTCCATTACCGACACCCATGTTTGGG
ACCGACTGGAAGGGTGTATGGGTAAGCGAGGGGCTTAGCATCTTCCCGGC
ACGGAGAGCACGTGCCGGGGACGCAGGAGAGTGCTTAAGAGCCTCGACTG
TGGCTTAG
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Synonyms
Publications