rna9607, rna9607 (mRNA) Nannochloropsis gaditana

Overview
Namerna9607
Unique Namerna9607
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1052
Alignment locationKK037254.1:273827..274438 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102838g1.7736.mrna
Orig protein idgnl|cribi|Naga_102838g1.7736
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:273827..274438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102838g1gene9325Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9607rna9607-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21097.1cds9576Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9607 ID=rna9607|Name=rna9607|organism=Nannochloropsis gaditana|type=mRNA|length=1052bp
GCCATGGGCCTCAGACTTGCTACACGGTGGCTTCCACATTCACGTTGAGA
CCGCGTCATTGCTCACTCTGACAGATTCTAGGCACAGTCTGCCACATTAG
CCCTGTCCATCGACAATGGTCATTCCTTCGAAGCGTCGACGAATCCCCTA
TCTCTTCCTCTTCCTGTTCTTTTCCATCGTCCTACTGCTTGCCTGGGCTC
CTCGAAGTATGGCGGCGAAAGCTAAGAATGCAAAGACTAAGGACACAATA
AAGCAAAAAAAAGGACAAAAGGAGCAGAAGTCTCCCCAAATGAAGAAGCA
GGGTGAGACCGCTACGCCAAAAAGGCAGCAAAAACAACAGCAAAGGCCGA
GAGAGAAATTGGAGGACCTCTCTCTCATGGATGACACAAAAGAAAACCGG
CAGTACCATGCCGCGAGGGTGATGAAGGGGACACCTTTGATCGAGATCCT
AGAAGGGCTCGTGCAAGAGGCAGCGCGCTTGAAAGGCAGCGAGGCCGCCG
AGGAAATTCGGAAGGCCATCCTCGAGTCGGACACTCGGGCCCTGACCCAG
GTGATGGAGAAGGCGTACGCCGGGACCTTCTCGGCCGAAGAGCTCGCTTT
CATCGCCGACTACAGCAACTCCGAGGTCGGGAAACGTGTGCAGCGGAAGA
TGAGCCAGTACGTGGCCAAGGTCACGCCCGCCATGGAGGCCTTCACCAAG
GAGGTGTTCTCGGGCCCGGGGCTGCAGGGCCAGGGACAGGGGCCACAGGA
GTGGCAGGACCAGCAGGCCCTCTACTCCTCCAAGGGCACCACTGTCTACA
TGAACGAGGGAAAGCCCAAGGGCAGGCAAAAGGAGCAGGGGAAGAAAAGG
GCAGCGGCCCGCGCGGGCCCCGCCAGTGCCAACGGCGGCGATGGGGAACT
CTAGGCGATGTGGAGAACGTCCTCCAGGGTGGCAGATTGTGCGGGTTCTC
GTTGTGTCGGGTCGGTTTTGAGGGAGCAAATGTTCCGCAGACAGCGGGTT
GATAGATCATGCGGGGGCCAAAACTGAGAACAAACGGGAAAGACGCCCTG
GT
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protein sequence of rna9607

>rna9607-protein ID=rna9607-protein|Name=rna9607|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
RVALASVTPGPRPPSPSLPSLLLAPVSIHMSVPEGGRASASSPAPSPRPS
SLPIAMSNGIRQASRPRRLAVVEEGERGGEGGLEGGAGGDALGRFLAGLS
VHSLPTPASADRRESEEKRRRRERREKKVMAAYKERVRAMREELEELEAR
VARAREEVGRAERAGGGEGGRRWRGRVNRRRRKERVRWW
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mRNA from alignment at KK037254.1:273827..274438+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9607 ID=rna9607|Name=rna9607|organism=Nannochloropsis gaditana|type=mRNA|length=612bp|location=Sequence derived from alignment at KK037254.1:273827..274438+ (Nannochloropsis gaditana)
CGGGTGGCCCTAGCCTCGGTGACACCgggtccccgccccccttccccttc tcttccctccctccttctcgcgccCGTCTCAATCCACATGAGCGTtcccg agggaggacgcgcctccgcttcctcccccgcaccctccccccgcccctcc tccctccccatcgccatGTCCAACGGAATCCGGCAAGCTAGCAGGCCCCG GCGgttggcggtggtggaggagggggagagagggggggagggagggctgg agggaggggcgggaggggatgCCCTCGGTCGGTTCCTGGCCGGTCTCTct gtccattccctccccaccccggcGTCGGCGGACAGAAGAGAgtcagagga gaagagaaggcggcgggagcggagggagaagaaggtgatggCGGCCTACA AGGAGCGAGTGAGGGCGATgcgggaggagctcgaggagctggaggcgagG GTAGCgcgggcaagggaggaggtgggccgCGCGgagagggccgggggggg ggagggcgggcggaggtggcgggggagggtaaacaggagaaggagaaagg aaagggtgagaTGGTGGTAGATTCATCGTCTGGGGagccctcctgcctcc tcaagGCGCGCC
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Coding sequence (CDS) from alignment at KK037254.1:273827..274438+

>rna9607 ID=rna9607|Name=rna9607|organism=Nannochloropsis gaditana|type=CDS|length=570bp|location=Sequence derived from alignment at KK037254.1:273827..274438+ (Nannochloropsis gaditana)
CGGGTGGCCCTAGCCTCGGTGACACCgggtccccgccccccttccccttc
tcttccctccctccttctcgcgccCGTCTCAATCCACATGAGCGTtcccg
agggaggacgcgcctccgcttcctcccccgcaccctccccccgcccctcc
tccctccccatcgccatGTCCAACGGAATCCGGCAAGCTAGCAGGCCCCG
GCGgttggcggtggtggaggagggggagagagggggggagggagggctgg
agggaggggcgggaggggatgCCCTCGGTCGGTTCCTGGCCGGTCTCTct
gtccattccctccccaccccggcGTCGGCGGACAGAAGAGAgtcagagga
gaagagaaggcggcgggagcggagggagaagaaggtgatggCGGCCTACA
AGGAGCGAGTGAGGGCGATgcgggaggagctcgaggagctggaggcgagG
GTAGCgcgggcaagggaggaggtgggccgCGCGgagagggccgggggggg
ggagggcgggcggaggtggcgggggagggtaaacaggagaaggagaaagg
aaagggtgagaTGGTGGTAG
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Synonyms
Publications