rna9595, rna9595 (mRNA) Nannochloropsis gaditana

Overview
Namerna9595
Unique Namerna9595
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1821
Alignment locationKK037254.1:251360..253299 -

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Properties
Property NameValue
Productoxidoreductase domain protein
Orig transcript idgnl|cribi|Naga_100041g36.3678.mrna
Orig protein idgnl|cribi|Naga_100041g36.3678
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:251360..253299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100041g36gene9314Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21108.1cds9564Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9595rna9595-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9595 ID=rna9595|Name=rna9595|organism=Nannochloropsis gaditana|type=mRNA|length=1821bp
ATGACATACAAATGCCGGGCTCTACAGGTTATCCTCGGATTATCAGGGTT
TGCCACTTCCTCTGGCGTCACGTCTATGTACCAAAATCACGTATTTTCAT
TTATACCAGTGATAAATGGACTGCCATGCGGGCGATCCAGCCACTGTAAC
TCCATTTCTCCTCGTCGAGCAGTTGTGCAATCACAATACGAAGAGGTTTC
ACGCCTTTCTTTCCCGGACGTCCTGGAAAAAATTCGCAGTATTGGGAAAG
AAGCAGCTTTTTTCTCACTCGACACCGAATTTACGGGATATCGACAGGAG
GAGAGAGACGAGTACTTCGACACTGTCCAAGAGCGCTACTTGAAAAAAAA
GAGAGTGGCTGAGCGCTACCTGCTGGTCCAAATGGGCCTGTCAGCTTTTG
TTTGGGATAAGGCCCTAGAGGATTACAAGGCATTCACATGGAACATTCAC
CTATATCCATCCAAGCTCCAGAGCGAGCGCATCTTCTCCTGCGATGCTTC
GAGTCTCAGCTTCTTGCGGTCTCACAATCTTGACTTCAACCTTTGGGTTG
ACGGCGTCCCTTTTTTGGCAATCGATCAAGAAGCCAGTCTACGCAAGCAG
GTGGAGGACCAGGCAGAATGGGACCTCAAGGCAAATGCTTACGCAGGCAA
GAAGCCCGCGCGAAGTAATTTTGATCCCAATGCGGATGCGGAGACGGTGG
AGCTCCACAGGCAGCTCAAAGAGGCTCTGGACAAGCTTGGGCCAGGTGCG
GAACCATTCCTGTTGCCGCAAAATCTATCCTGGTTCAGAAAAAAGATGGT
ACAGAACACAATCGGGCGGCATCCAAGGAAGGCGAATCTGTGGCTCGAAG
TTATCGACCCACCAGCCGCAGAGGCGGGAGCAGGGGTGGGACCGACATCA
ACATCTCTTTCGGCTTACAATCTAGAGCAATTGCAAGTCCGCTATGTCGA
CACTGAGGAGCGAATCAAATGCGTCCAAGCGAAGAAATCCCAAGCGTTGA
CAGATATTGAAGAGGCTGCAGGTGCAATGCGCATTTTGAAAGTGATTAAA
GATTCAGGGCGCCCCCTAGTAGGCCACAATTTTTTCCTAGACCTGCTCTT
CCTCTACACGCACTTCGTGAAGCCCACTTTACCCGACACAGCCATGGGAT
TCAAAGCCAAAGTCCAGCATTTTTTCCCCTCGATATATGATACGAAGGTG
CTGGCAAAGTCCCTGGGAGTCACCGACGAGCACGGCGACACAAATCTGGC
GGGCCTCTATCGGAAAGAGGGGGGGGGCAGGGTAGCACTTGAAGGGGTTA
CAGGAGCAGCGCATGAGGCGGGGCACGATGCTTTCATGACGGGCGTGATA
TTTTCAAGCCTTTTGCGAAGGATAAAGGCAAAATTATCGGAGAATATTAG
CGACTGTGGGACGTCTCCGTCACCTCTTTCTTCTCCTTGCAGCATGCCCA
GCCTCGCGTACGCTGAGAATTGGAGCAATAAGGTATTTATGCGTCTCACA
GACGTTGAGAGCTTTGAGCTGCGGAACTTCAAACAAATTCCAGACCGAAC
TCGTGTCTTCCACGTGCGCACGCGATGCAGCGGTGCTTTGCCCCACTTGC
AGCATCACCAGTTGCGCCGGGCATTCTCTTCCCTTGGCTCCGTCCAAATC
AAGGCTTTAGGCAAGCATGAAGCCTACGTGGTTTTCCATGACATAACAAG
GCCACCGCCGGAGGTGAGCGAGCTGAAAGAGCTTGTGTCGTCTTCGGGGG
CTGAGGCAGATGAGGGACTTGAGATTGTAACGTATGAGGAGCGCCGCGTG
GCGTTGGGAATTTTGTGGTGA
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protein sequence of rna9595

>rna9595-protein ID=rna9595-protein|Name=rna9595|organism=Nannochloropsis gaditana|type=polypeptide|length=391bp
MSMTSSFSITPTSDILNWGVIGCGDVVEGKSGPAFSRIPSCRLVAVMRRN
KALAESFAHRHNVASFYTDAREILRDLDVEAIYLATPPGTHKDLALLCAA
AGKPVLVEKPMARSAAECRAMLSEFQHSDLPLFVAYYRRHLPKFELVRDI
LQSKNKLGPITEIRAFCARPSSGSDCEEWRVDASVAGGGLFLDLGSHMLD
LLDWWFGPLQDVKGLAASTKGKGSSYDSALDEVETHVEDQVRMLFRTGSG
AVGVGSWNFSSHCSEDYIEIIGADGGVKFSVFDNGPVFLKRRGCGEEDEI
EVIDNFGPDFSPHVHLPLIAAVTEDLQDWKRAREVARQGRSVMKEISEWR
CRSTGASALRTSEVMDTVLAAYYGGSRDDAFWERPQSWSKS
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mRNA from alignment at KK037254.1:251360..253299-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9595 ID=rna9595|Name=rna9595|organism=Nannochloropsis gaditana|type=mRNA|length=1940bp|location=Sequence derived from alignment at KK037254.1:251360..253299- (Nannochloropsis gaditana)
CCTGGCTTCGTACACTACCTGCAGGATAGTGGTGCAGAGCGCTCTGTTAC
CGTATGTATGTGCGAGTCGGCGTAGGGAGAGCATCGATTCTCGTAATATA
TAGCTTAGATAATGGTATAATTTGCTCGTGCCCCTCACAATCTTCGTCTT
TCAACTAAGGTCAATCGTGGGCATTCACCCGTGCGGGGGGGGGTAATGGC
GTAGCCCACCCAAAAGTTGAAATGCTTTCGTAAAACTTACTTATTGATGA
AAAATGATGCTGCTATATACTTGGGTATGATATTTTTGCGCCCAAACCTT
TGGAGAAAATACTGAAATTAACACTTATCAAAGGGAGAGTCGATCGTGTG
ATCCGATCGGAACAGCACGTACGTACACGAGGAAGCATATGCATAAAAAG
AAGTTTGAGCGAAGAAGGGTTCAAATCATACATAGGGAGCGGTTGAAATA
GATGCGCTTATTCCATAAAAGGATTTTCAGTACTTGAGAAGGATGATTGC
AGCAAATACGACGAGGCTGTATCACAAATGCCTCTTCAAAGTTCATCTCC
TGGAGACGGACGTATCTCACTGATTCCCTCCATATAATCCCTTTTTATTG
TCGAGCTTTAAAATTTCTGCCATTAACAACTTATCATTTCGCTGTCATAT
CCTATGTCTAGGGCGCCCATCTTATAGGTCTCGTGTCGGACAATGTCGAT
GACCTCTTCATTTTCCATTACCCCAACTAGTGACATATTAAATTGGGGAG
TCATTGGATGTGGAGATGTTGTCGAAGGCAAGTCGGGCCCTGCTTTTTCC
CGAATTCCAAGCTGCCGTCTTGTCGCTGTAATGCGCCGCAACAAAGCACT
CGCCGAATCCTTCGCTCATCGTCACAATGTGGCATCCTTCTATACGGACG
CACGGGAAATTCTTCGAGATTTAGACGTCGAAGCAATTTACTTGGCCACA
CCTCCAGGCACGCATAAAGACCTTGCACTGTTGTGCGCGGCTGCGGGAAA
GCCGGTATTGGTCGAAAAGCCCATGGCTCGTTCTGCTGCTGAATGCCGCG
CCATGTTATCTGAATTTCAGCATTCAGACTTGCCCTTGTTTGTCGCTTAT
TATCGTCGCCATCTCCCAAAATTTGAGCTCGTCAGAGATATTTTACAAAG
CAAAAACAAACTAGGTCCCATTACGGAGATACGCGCATTTTGTGCGCGGC
CATCTTCAGGATCTGACTGTGAGGAGTGGCGAGTGGACGCCTCGGTGGCC
GGGGGGGGGCTCTTCCTTGATCTGGGAAGCCACATGCTGGATCTGTTGGA
CTGGTGGTTTGGGCCTTTACAGGATGTGAAAGGGCTCGCCGCCTCCACCA
AAGGAAAGGGGTCCTCCTACGACTCCGCTTTGGATGAAGTTGAGACACAC
GTAGAAGATCAAGTGCGCATGCTCTTTCGTACAGGGTCTGGGGCCGTGGG
AGTTGGCTCTTGGAATTTCTCGTCTCATTGCAGCGAGGACTATATCGAGA
TTATTGGGGCTGATGGTGGTGTTAAGTTCTCGGTATTCGATAACGGACCG
GTCTTTCTGAAAAGACGGGGCTGTGGCGAGGAGGACGAAATCGAAGTCAT
CGACAACTTCGGCCCTGACTTCTCTCCCCATGTTCACCTTCCTCTTATCG
CTGCAGTGACAGAAGACCTGCAGGATTGGAAAAGGGCACGGGAAGTGGCC
CGGCAAGGTAGGAGTGTCATGAAGGAAATCTCCGAATGGAGGTGTCGCAG
CACGGGGGCGTCGGCACTGCGCACGAGTGAAGTGATGGACACAGTATTAG
CAGCGTATTACGGAGGGAGTCGAGATGACGCCTTTTGGGAGAGGCCTCAA
AGTTGGAGCAAATCATAACCTTATAAGCAGAATCAGAAGTTTTAACGTAG
GGTTGAGTAATGTGAAAAAAAAACAAGAACGGTAACGTTA
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Coding sequence (CDS) from alignment at KK037254.1:251360..253299-

>rna9595 ID=rna9595|Name=rna9595|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at KK037254.1:251360..253299- (Nannochloropsis gaditana)
ATGTCGATGACCTCTTCATTTTCCATTACCCCAACTAGTGACATATTAAA
TTGGGGAGTCATTGGATGTGGAGATGTTGTCGAAGGCAAGTCGGGCCCTG
CTTTTTCCCGAATTCCAAGCTGCCGTCTTGTCGCTGTAATGCGCCGCAAC
AAAGCACTCGCCGAATCCTTCGCTCATCGTCACAATGTGGCATCCTTCTA
TACGGACGCACGGGAAATTCTTCGAGATTTAGACGTCGAAGCAATTTACT
TGGCCACACCTCCAGGCACGCATAAAGACCTTGCACTGTTGTGCGCGGCT
GCGGGAAAGCCGGTATTGGTCGAAAAGCCCATGGCTCGTTCTGCTGCTGA
ATGCCGCGCCATGTTATCTGAATTTCAGCATTCAGACTTGCCCTTGTTTG
TCGCTTATTATCGTCGCCATCTCCCAAAATTTGAGCTCGTCAGAGATATT
TTACAAAGCAAAAACAAACTAGGTCCCATTACGGAGATACGCGCATTTTG
TGCGCGGCCATCTTCAGGATCTGACTGTGAGGAGTGGCGAGTGGACGCCT
CGGTGGCCGGGGGGGGGCTCTTCCTTGATCTGGGAAGCCACATGCTGGAT
CTGTTGGACTGGTGGTTTGGGCCTTTACAGGATGTGAAAGGGCTCGCCGC
CTCCACCAAAGGAAAGGGGTCCTCCTACGACTCCGCTTTGGATGAAGTTG
AGACACACGTAGAAGATCAAGTGCGCATGCTCTTTCGTACAGGGTCTGGG
GCCGTGGGAGTTGGCTCTTGGAATTTCTCGTCTCATTGCAGCGAGGACTA
TATCGAGATTATTGGGGCTGATGGTGGTGTTAAGTTCTCGGTATTCGATA
ACGGACCGGTCTTTCTGAAAAGACGGGGCTGTGGCGAGGAGGACGAAATC
GAAGTCATCGACAACTTCGGCCCTGACTTCTCTCCCCATGTTCACCTTCC
TCTTATCGCTGCAGTGACAGAAGACCTGCAGGATTGGAAAAGGGCACGGG
AAGTGGCCCGGCAAGGTAGGAGTGTCATGAAGGAAATCTCCGAATGGAGG
TGTCGCAGCACGGGGGCGTCGGCACTGCGCACGAGTGAAGTGATGGACAC
AGTATTAGCAGCGTATTACGGAGGGAGTCGAGATGACGCCTTTTGGGAGA
GGCCTCAAAGTTGGAGCAAATCATAA
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Synonyms
Publications