rna9573, rna9573 (mRNA) Nannochloropsis gaditana

Overview
Namerna9573
Unique Namerna9573
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2048
Alignment locationKK037254.1:201791..203308 -

Link to JBrowse

Properties
Property NameValue
Productmyo inositol monophosphatase
Orig transcript idgnl|cribi|Naga_100041g12.3676.mrna
Orig protein idgnl|cribi|Naga_100041g12.3676
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:201791..203308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100041g12gene9293Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21106.1cds9542Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9573rna9573-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9573 ID=rna9573|Name=rna9573|organism=Nannochloropsis gaditana|type=mRNA|length=2048bp
CTCATGCATAACAGGGGGAAAGGAAACCGCTCCGGTGTTTCCCTATGCAC
CGGACCTCATCCTCTAGCTACCTCGTCCTCGCTTTACTTCTACTACTAGC
TACCAGTTCTGAACCGTTTTCTTTTGGCTGGCTTTTTTCGAGGAATAAAC
TGTCGAAGAAGCAACAAGCTCAGAACGATTACTGCTACCCTTGGCTAGAA
GGCAAGAAGCTGGTAAATGCGAGACAGAGTCATGAGCAATCTGTAGATGA
CGTACTTTTAATGTGCCATGATCGTATCTCAGTTGGTGACAAAGAAATGA
AAATGACAGAGCACCGTGTGAACAGCAACATGGATAACGAAGAAGACGAA
GAGAAACGGCGCATAAATCGATTTCTGACTTGGCTACGAGCACATGGCGC
GCGTTGTGACAAGATTGAGTGGCCCTCCTACGCCACTGGCAGCCAGATTC
GGGGTGCCGTCGCCCTGGACGACATCAACAGCAATGAGGACATGGTCAGC
ATTCCTGAGCCCCTTCTTCTCACTCCGGACGTAGCTTTGAAGGACCCCGA
CATTGGCAAAGTCTTCGAAGATAATCTGGAGGACTTTTCAGATGAGGACA
TGCTGCTGATCCTCCTGATGCATGAACGCGGCAAAGGGGAGACATCCTTC
TTCTATCCCTACCTAGCCACCTTGCCCCGCCTGCCCGACACCCTCCTGAA
CTGGAACGAAGAAGGCTTATCCTGGCTACAGGATGAGGGCCTAAGCTTGG
AGGTCTTCTTGCGGGAGAGCCAGCTGACCGCTCACTACACCAGGCTGGTT
GAGGAGAAGCTGAAGGCGGGATGGCCGGGGCTGTTTGGTGAAGCCCCAGA
CGACGCGTCCGACAGCGAGAGCAAGGGAGCCGACCCATATTCCCTGGAGA
ATTTCAGGTTTGCCTGGCTGACTATCCAGGCGCGGGCGTTCGGGCGACGA
CTGCCGTACTCGGCCCTGATTCCGCTTTGCGACTCCTTCAACCACGCAAA
CGTCGCGGTCACGTACAGGCTGGAGCCGGCGTCCGTCGCTCTGAACAGAG
AGGGCGGGAGGCAGAGAGAAGAGGATGTGCGCTTGGAAGGACAGATACTA
TTTCCCTGTCCTGATTCCAGATCGCCGCCGCGCGTCTTTCACCTGTCCCC
CAGCGGAAGCAACCGCTACAAGAAAGGAGAGGAGGTTTTCACGTCCTACG
GGCGACGCACGAACGCGGAGCTCCTCCTTTTCTATGGCTTCGCGCTTCTC
GACAATGAGCACGAGTCTGTGGCCTTAAGTATGCCTGGTATCCCCTCCCC
ACCTTCTTGGTTTCAGGCCTCCCTCTCGGCGCTGGGCACAGCTGGCAGCG
TGGGCGGGAGGGCCCGGTCCATGGCCGAGGATGTGCTGCGGCCGTCGCAC
TTACTCTTCGCGGGAGCTACAGAAGTGCCGAGTGAGCTGGTTGCCTATTT
TCGAGCGCTGACTGCTTGTTGCAGCATGAATGAAAAGGATGTTGTGGAGC
AGAAGCTCGATTACATGCAGCATTTCCCCTGCTCACGGCACGAGAGGGAC
GCCTTTTCTACCTTGGGGGCCCACATGAGTGCCTCGTTGGCAGCTTTCCC
CACCTCAATCGAGGAGGATGAAGTAGAGCTCCTTGCCAGTTTGGCCGCGT
CTAAAGGCAGTGAAGGAAAACGACGGGAAGTAGAGCCATGGGAAAACAAA
GGGATCCGTGATGCAGGGGTCAAGGGGGAGAATGCAAGTTGTCGACTCGC
GGCTCTTACATACCGACTAACTCGGAAGCGGGTTATCAAACACCATTTAG
AACTGGTCGACAAAAGACTGGCGGCGCTGAATGCAACTCTAAGAATGGAG
AGGAGCCAAGAGACAGCTTTCGTGGTAACGGAGAATGCCTCGGAAAGAAA
AAAGAAGAAATGAAAGTTGAGATACCCTTGTACTTCACATAGCTACTTCG
GCCAATTCTCAAATGGACTTGGCGACTGTGGCAAATCTTATGCAACGCCA
GTCTTAAATTACACAGGTTACCGCCAGCAAGATTGTCCTACTTGGATG
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protein sequence of rna9573

>rna9573-protein ID=rna9573-protein|Name=rna9573|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MGASIDERKPMVSGFGYASHSSSGIGSAHFRGRGRSHAPFKTWIWRHWPL
LMVGSFGAFYLIHRLSHMGSSTSAPKVTSQSAQQLRSDSSRVQNGKVRLS
DLIGASIHLSEVAAHEITDVKFGGKEATEVKGKTDEGVDEPVTLADARSN
SVFVNGLRELFPGISILSEETDPDLEEVGISAINGVELTHDPWLDLKDIL
ITVDPLDATKEFTENLLHFVTTMVCVVHKGKPIAGIINEPFVKDEAAVWG
VALDKATEGADLRVSHGLQPSTEDTVAGADKVVISRSHTGSGADVVSEYL
PGKQPVFAGGSGYKALRVLEGDANAYVHVTKIKSWDVCAADAVVHAAGGK
FTNLKGERLVYEKDDPLISGGIIAAADSKMHAWYVEKLAPFLSSHGDKQR
I
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mRNA from alignment at KK037254.1:201791..203308-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9573 ID=rna9573|Name=rna9573|organism=Nannochloropsis gaditana|type=mRNA|length=1518bp|location=Sequence derived from alignment at KK037254.1:201791..203308- (Nannochloropsis gaditana)
AAACATGGGCACTCACCCATGCTCACACATGTATTTGACTCAACGTTAAA
TTTTCTTTGCAGGGCTTTACAGGGTTCTTTAATCCTTCGAAAAGAGAGAA
CGTGGCGCCGCCATCCCAAGAACAAGAACACACGGCCGATTCCGCAATGG
GAGCCTCCATCGACGAGCGCAAACCCATGGTGAGCGGCTTTGGATATGCA
TCTCACAGTAGCTCTGGGATCGGATCTGCTCATTTTCGAGGCCGTGGCCG
CTCCCACGCACCATTTAAGACATGGATCTGGAGACACTGGCCTCTCCTGA
TGGTCGGCTCATTCGGAGCTTTCTATCTGATCCATCGGCTCTCGCATATG
GGTTCCTCCACTTCAGCACCTAAAGTCACGTCACAAAGTGCACAGCAGCT
GCGTAGCGATTCAAGTCGTGTGCAGAATGGCAAGGTGCGCCTGAGTGACC
TGATCGGCGCAAGTATTCACCTGTCGGAGGTAGCGGCCCATGAGATAACT
GACGTTAAATTCGGAGGCAAAGAGGCCACTGAGGTGAAAGGCAAGACCGA
TGAAGGTGTCGACGAGCCAGTAACGTTGGCGGATGCTCGGAGCAATAGCG
TGTTCGTCAACGGACTTAGAGAATTGTTTCCGGGCATCAGTATTCTTTCC
GAGGAGACGGACCCGGACCTGGAAGAGGTTGGCATTTCGGCCATCAATGG
GGTGGAGCTCACGCATGATCCCTGGCTAGACTTGAAGGATATATTGATCA
CAGTCGATCCTTTGGACGCCACGAAGGAGTTCACAGAAAACTTGCTGCAC
TTTGTGACTACCATGGTATGCGTGGTGCATAAGGGCAAGCCCATAGCAGG
CATCATTAACGAGCCCTTCGTCAAAGATGAGGCGGCAGTCTGGGGCGTGG
CATTGGACAAAGCAACAGAAGGGGCGGACTTACGAGTGAGTCACGGCCTG
CAGCCCTCGACAGAGGACACGGTCGCGGGGGCGGACAAAGTAGTAATTTC
GCGGTCTCACACAGGGAGTGGCGCCGATGTCGTGTCAGAATATTTACCCG
GCAAGCAGCCTGTGTTTGCAGGAGGTTCAGGATATAAGGCCTTGCGCGTG
CTGGAAGGCGATGCTAATGCATACGTGCATGTAACCAAGATAAAATCATG
GGACGTGTGCGCGGCCGACGCGGTCGTGCATGCGGCTGGTGGTAAATTCA
CCAATTTGAAGGGAGAACGACTTGTGTACGAGAAAGATGACCCCTTGATT
TCAGGCGGGATCATCGCTGCGGCCGACTCCAAGATGCATGCCTGGTATGT
GGAAAAGCTAGCTCCCTTTCTATCGAGCCACGGCGACAAGCAGAGGATTT
AAGAAAGGAAGAGCGAAATATAGTGGGGTGGTGAGGCATGGGCCAAACGA
GCAGGTGAAAATAGTGAAAGATTTGTGTCTAGATGGGGTAAAGTGTATCA
GTGTACCAACAAATCCAATCCATTCATCGGACTACACAAGTGAAAGAATA
AAATCATGTATTATGATA
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Coding sequence (CDS) from alignment at KK037254.1:201791..203308-

>rna9573 ID=rna9573|Name=rna9573|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at KK037254.1:201791..203308- (Nannochloropsis gaditana)
ATGGGAGCCTCCATCGACGAGCGCAAACCCATGGTGAGCGGCTTTGGATA
TGCATCTCACAGTAGCTCTGGGATCGGATCTGCTCATTTTCGAGGCCGTG
GCCGCTCCCACGCACCATTTAAGACATGGATCTGGAGACACTGGCCTCTC
CTGATGGTCGGCTCATTCGGAGCTTTCTATCTGATCCATCGGCTCTCGCA
TATGGGTTCCTCCACTTCAGCACCTAAAGTCACGTCACAAAGTGCACAGC
AGCTGCGTAGCGATTCAAGTCGTGTGCAGAATGGCAAGGTGCGCCTGAGT
GACCTGATCGGCGCAAGTATTCACCTGTCGGAGGTAGCGGCCCATGAGAT
AACTGACGTTAAATTCGGAGGCAAAGAGGCCACTGAGGTGAAAGGCAAGA
CCGATGAAGGTGTCGACGAGCCAGTAACGTTGGCGGATGCTCGGAGCAAT
AGCGTGTTCGTCAACGGACTTAGAGAATTGTTTCCGGGCATCAGTATTCT
TTCCGAGGAGACGGACCCGGACCTGGAAGAGGTTGGCATTTCGGCCATCA
ATGGGGTGGAGCTCACGCATGATCCCTGGCTAGACTTGAAGGATATATTG
ATCACAGTCGATCCTTTGGACGCCACGAAGGAGTTCACAGAAAACTTGCT
GCACTTTGTGACTACCATGGTATGCGTGGTGCATAAGGGCAAGCCCATAG
CAGGCATCATTAACGAGCCCTTCGTCAAAGATGAGGCGGCAGTCTGGGGC
GTGGCATTGGACAAAGCAACAGAAGGGGCGGACTTACGAGTGAGTCACGG
CCTGCAGCCCTCGACAGAGGACACGGTCGCGGGGGCGGACAAAGTAGTAA
TTTCGCGGTCTCACACAGGGAGTGGCGCCGATGTCGTGTCAGAATATTTA
CCCGGCAAGCAGCCTGTGTTTGCAGGAGGTTCAGGATATAAGGCCTTGCG
CGTGCTGGAAGGCGATGCTAATGCATACGTGCATGTAACCAAGATAAAAT
CATGGGACGTGTGCGCGGCCGACGCGGTCGTGCATGCGGCTGGTGGTAAA
TTCACCAATTTGAAGGGAGAACGACTTGTGTACGAGAAAGATGACCCCTT
GATTTCAGGCGGGATCATCGCTGCGGCCGACTCCAAGATGCATGCCTGGT
ATGTGGAAAAGCTAGCTCCCTTTCTATCGAGCCACGGCGACAAGCAGAGG
ATTTAA
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Synonyms
Publications