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Properties
| Property Name | Value |
|---|
| Product | zinc finger protein |
| Orig transcript id | gnl|cribi|Naga_100041g3.3682.mrna |
| Orig protein id | gnl|cribi|Naga_100041g3.3682 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:181838..185044 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9564 ID=rna9564|Name=rna9564|organism=Nannochloropsis gaditana|type=mRNA|length=1308bp
ATGGCTCTGAAACTTTACACAAACCCGGGCAACTTCCGTGCTTTTAAGAT
CCTCGTCGCTGCGCTTTACAATGGAGTGGACATTGATGTGGTGGACCTGG
ATTTGGCTGCCAAGAAAAGAACAGATGTATTAGCCAAATCTCCCGCTGGC
AAAGTTCCTGTGCTGGAGACCCCGCAGGGTCTGTTGTTCGAGAGCAACGC
CATTGCCCGCTATATCGCTCGAGCCCGGCGTGACACAGACTTATACGGGG
TCTCCTTCTTTGACTCCGGCCTGGTCGATGCTTGGATCGACTTCGCTGCT
CAGGAAGTAGAGCTCCCTGCTACGCTGTGGGTGTACCCTGTGTTCGGCTA
CCTCCCCCACAACGCCGCGGTGACGGAGAAGGCCAAGGCGGATCTGGGCG
CGGCCATGGAGATCCTAGACAACCACCTTGCCGATAAGACGTACCTCGTC
GGGGAGAAAGTGACACTTGCAGACATCACGGTGGCCTCTGCCTTGGTCTA
CCCGTACAAGATCGTCATGAGCCCCGAGTACCGCGCCCAGTACCCGCACG
TCCTCCGCTGGTTCCTGACCATCGTCAACCAGCCTCACTTCCGGGCCGTG
ATCGGGGACGTGGTCTTGGCGGAGAAAGAGCTCGTGCCCTCGGGCGCACC
GCCTGCCCTGGCGTTGCCGGCGAAGGGTGCAGGGAAGAAGGAAAAGAAGG
AAAAGAAGGAGAAAGCGGCGGCGCCAAAGCAAGAGAAGAAGAAGGAAGAA
GCACCCGCCAAGACGGGGGAAGACCTAGAGGAGCAGTTGGCAAAGGAGGA
GAAAAAGAAGGCGGCAGAACATCCACTGAAGATCCTGGACCGGGAGTCCC
CCTCGGAGTTCGTGATGGACACCTGGAAGAAGACGTACTCGAACGCCAGG
TCCTACGACCAGGCTATGGACGAGTTCTGGAAGGTCTTCGACAGCCTGGG
GTACTCCCTCTGGTTTTGCAATTATCAGTACAACAGCGAGCTGACCAAGC
TCTTCATGACCTGCAATCTGGTGAGCGGCTTTGTGCAACGGACGGACGAA
CTGCGGAAGTGGGCGTTCGGATGCATGTGGATCCTGGGCGAGGACGCTCC
GGGGAAGATGGAGATCCGGGGGCTCTGGCTGATGCGCGGGCAGTCGGATT
CCTACATTAAGAGCGCCAACCCGGACGCCGAGTTCTACACCTGGACCAAG
GTGCCGACCCCAGTCTCTGACGAGGACAAGAAGAAAGTGCAAGAATACTG
GTGCAGTGACGACTCATTGGCGGGGCTGCCTGTGTTGGACTGCAAGGTCT
TTAAGTAA back to topprotein sequence of rna9564 >rna9564-protein ID=rna9564-protein|Name=rna9564|organism=Nannochloropsis gaditana|type=polypeptide|length=839bp
MPKCVMQSSSLPLRVLLLAILLATAPLPTAALAEWQKVWAAPPSNVNSSA
PSPPNRQSQGMTIWKDTMLVQGGLGLNRGGLGDLWSFDLTTRVWRNVSQQ
RSPTDPLYYRSAQSFFSRAEQGEAGATATLGLYMWGGREMPGGDATQGST
QGTNKLLKFVLEDGEDDWTEGGHWITVPTSSAETEDPASGGPAGRSDHSG
LLYKNATTGKEYFVVYGGRKIDAKGKEVAVGAAAGNSMAREVFGDTWSLD
MSTKEWTLLHAGGEGAAPPSRFLHAASILNDTTMVVFGGLTFYGSSLFAL
DDVWLFDLRQRTWQPQKMEVNLLRSALPMLQGPLTVSAPAHAPIDDPAAA
GSAAAATATASSVVVPAMYAFAGYVIYTSAGLAVVYNDLLVWDPAKNYWQ
KLANKRGKTAPAPRFDHRGLVWRGSTLVFYGGSYQDVNDVGDIWMIDTSL
MEESQLVKAPPEGLNALFAGRMMFILSSLVLMCLCSAFLSLRMRRQMLQR
ARAAGGEGGVQGGLGGARGSQERARATEEALRLLPVRPYCRSSSEDEAGM
AERGGQGDGEGVGGTGVSALGGQGRGAGGAGAALTVDNKDMCAICLMDYV
EEEMLRELPCGHRFHVGCVDQWFRSSGSLSCPMCKARVVATSPSLLPSSS
TSTTASDIASPYVPSTGVAAHALSSLLSSLNPFRGQRLQRLASSSSSSTM
SADAGARQSNANRSTPGSISPVLPASASRVGASPGPNGVAAGTNREGEGG
TYQPPDDLIPYHDMSVVEMQQPVATTPSVHTPAPVFASPSSSSPRRRNDL
PPRPPMSQPPAAAATVGTRNVEEGREDERVVSPRGASLV back to topmRNA from alignment at KK037254.1:181838..185044- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9564 ID=rna9564|Name=rna9564|organism=Nannochloropsis gaditana|type=mRNA|length=3207bp|location=Sequence derived from alignment at KK037254.1:181838..185044- (Nannochloropsis gaditana)
GCCCCGTGCCATCCCCTCTTGCATGGTCCGCGCTGCCACGGCTGCCTCTT
TGCTCCTCAAAATAAATGTGATATTATGCCTTGCACTTGTTTTGGAGGCG
TGCTTCTCCATGTCTGCGCCTTTGCAGACGTAGACAGAGCGCCCAGGAGA
GGATAATCCACAAAATCAGAACTAGAACAACATATCATGACTTCTTCCTG
TCATCATTTAAGCGCACAGGAGACGGTAAGCGCAGCTACAATGGTAAGGA
TATAAAGCATCTCCTTGTCGCTGTGGTCTTCGTCACCGGTCTTGCCACGG
CAGGGATGCCAAAGTGTGTCATGCAATCAAGCAGCCTCCCTCTACGCGTG
CTCCTTTTGGCCATCCTGCTTGCCACGGCCCCTCTCCCAACCGCCGCCCT
GGCGGAATGGCAAAAGGTTTGGGCCGCACCTCCATCCAATGTTAACAGTA
GCGCGCCCTCTCCTCCCAACCGGCAGTCGCAGGGCATGACCATCTGGAAG
GACACGATGCTCGTGCAAGGCGGCCTGGGCCTGAATCGGGGGGGTTTGGG
TGACTTGTGGTCGTTCGACTTGACCACCCGCGTTTGGCGAAATGTCTCTC
AACAAAGATCACCAACGGATCCACTATATTATCGTTCAGCCCAAAGCTTC
TTTTCCCGCGCAGAGCAAGGAGAAGCGGGAGCAACAGCCACCCTGGGACT
TTACATGTGGGGGGGCCGAGAAATGCCTGGCGGGGACGCCACTCAAGGGA
GCACCCAAGGGACGAATAAGCTCTTAAAGTTTGTGTTAGAAGATGGAGAG
GACGACTGGACGGAAGGGGGGCACTGGATTACCGTTCCGACCTCGAGTGC
CGAGACGGAGGACCCTGCATCAGGCGGCCCCGCGGGGAGGAGCGATCACA
GCGGTCTCCTCTACAAGAATGCCACGACGGGGAAGGAATACTTTGTCGTC
TACGGGGGTAGAAAAATCGATGCCAAGGGAAAGGAAGTGGCGGTGGGGGC
GGCGGCGGGCAATTCCATGGCGCGCGAGGTGTTCGGTGACACGTGGTCTC
TGGATATGAGCACAAAAGAGTGGACGTTGCTGCACGCAGGGGGGGAGGGC
GCAGCCCCGCCGTCACGCTTTCTGCACGCGGCTTCCATCCTGAACGATAC
CACCATGGTCGTCTTCGGGGGGCTGACCTTCTACGGCTCGTCCCTCTTCG
CCCTAGACGACGTCTGGCTCTTCGACTTGCGCCAGCGGACTTGGCAGCCG
CAGAAAATGGAAGTGAACCTATTACGCAGTGCCTTGCCCATGCTGCAGGG
CCCCCTGACGGTCTCTGCGCCCGCTCATGCTCCCATCGACGACCCTGCGG
CCGCAGGATCCGCCGCAGCCGCCACAGCGACGGCCTCAAGCGTTGTCGTC
CCGGCCATGTACGCCTTCGCCGGCTACGTCATCTACACGTCCGCGGGCCT
GGCGGTCGTTTACAACGATCTCCTGGTCTGGGATCCCGCCAAGAACTATT
GGCAGAAACTCGCGAATAAACGGGGCAAGACGGCGCCGGCGCCGCGGTTC
GACCATCGGGGCCTTGTCTGGCGGGGGAGCACCCTGGTGTTTTACGGGGG
GAGCTATCAGGACGTGAACGATGTGGGCGACATCTGGATGATCGACACCA
GCTTGATGGAGGAGAGCCAGCTGGTGAAGGCGCCGCCGGAGGGCTTGAAC
GCGCTCTTCGCCGGACGGATGATGTTCATCCTCTCCTCCCTTGTGCTCAT
GTGCCTGTGCTCCGCCTTTTTGTCGCTCCGTATGCGCCGACAGATGCTGC
AGCGAGCCAGGGCCGCGGGGGGGGAGGGAGGTGTGCAGGGCGGGCTAGGA
GGGGCAAGGGGGAGTCAGGAGAGGGCGCGGGCGACCGAGGAGGCCCTGCG
CTTGTTGCCAGTCCGGCCGTACTGCCGCAGCAGCAGCGAGGACGAGGCGG
GCATGGCGGAGAGGGGGGGCCAAGGCGACGGGGAGGGAGTCGGAGGGACG
GGTGTCTCGGCGTTGGGAGGGCAAGGGAGAGGCGCGGGGGGGGCGGGGGC
GGCGCTTACTGTCGATAACAAGGACATGTGTGCCATTTGTCTGATGGACT
ACGTCGAGGAGGAAATGCTGCGGGAGCTGCCCTGCGGCCACCGCTTCCAC
GTGGGCTGCGTCGACCAGTGGTTCCGCTCCTCGGGCAGCCTGTCTTGCCC
TATGTGTAAGGCCCGCGTGGTCGCTACCTCGCCGAGCCTCCTGCCCTCGT
CCTCCACCTCGACCACGGCCTCCGACATAGCCTCCCCCTACGTCCCTTCC
ACCGGCGTCGCCGCCCACGCCCTTTCCTCCCTCCTTTCCAGTCTCAATCC
CTTCAGAGGTCAACGCTTGCAGCGCCTCGCTTCCTCGTCCTCCTCCTCGA
CCATGTCTGCCGACGCCGGCGCTCGACAGAGCAACGCCAACCGCTCTACG
CCCGGCTCCATCTCTCCGGTCCTTCCGGCCTCCGCGTCTAGGGTCGGTGC
GAGTCCGGGGCCGAACGGCGTGGCTGCTGGCACTAACAGGGAGGGGGAGG
GAGGAACGTACCAGCCGCCGGACGATCTGATCCCCTACCACGACATGTCC
GTGGTGGAGATGCAGCAGCCCGTGGCTACCACGCCTTCCGTCCATACACC
CGCCCCGGTCTTCGCCTCCCCGTCGTCCTCATCTCCGAGAAGAAGGAATG
ACCTACCGCCTCGCCCGCCCATGTCGCAACCCCCGGCTGCAGCAGCCACA
GTGGGCACGAGAAACGTAGAGGAGGGGAGGGAGGACGAGAGAGTTGTTTC
GCCAAGAGGGGCCAGCCTCGTGTAAAAATTTGGAATAAGCCCCTAAAAGG
AACGTGCACAAATACGACGGACGGAGGAGTGAGCAGTGGAACATATGGAC
ATGAATGCAACTCAGTGGAGGAGAGGGAGAAGGGTGTGGGAAGATGTCAG
AGGGGACCATTAAAGACTAAGCGGGAACGCCAGAAGCAAAGAAATTTATT
TATCACGAGCAGCGTGTGGCGTTGTAGCGACTAATGCTTCTCGCCGAGAA
TCCGGGCTCGGTCTTCTTGCTATGGTGATCCTGGTCCTCGCTTAAATCGC
ACACAAAAAAGGGGACGAAAGGGGGGACGGGGGGTCAGAGGCTGCAGCAC
TCGCGACAGGGCTTACTCACGGAGAAACACTCGACGCCCATACCGCAGGG
GCTGGCC back to topCoding sequence (CDS) from alignment at KK037254.1:181838..185044- >rna9564 ID=rna9564|Name=rna9564|organism=Nannochloropsis gaditana|type=CDS|length=2520bp|location=Sequence derived from alignment at KK037254.1:181838..185044- (Nannochloropsis gaditana)
ATGCCAAAGTGTGTCATGCAATCAAGCAGCCTCCCTCTACGCGTGCTCCT
TTTGGCCATCCTGCTTGCCACGGCCCCTCTCCCAACCGCCGCCCTGGCGG
AATGGCAAAAGGTTTGGGCCGCACCTCCATCCAATGTTAACAGTAGCGCG
CCCTCTCCTCCCAACCGGCAGTCGCAGGGCATGACCATCTGGAAGGACAC
GATGCTCGTGCAAGGCGGCCTGGGCCTGAATCGGGGGGGTTTGGGTGACT
TGTGGTCGTTCGACTTGACCACCCGCGTTTGGCGAAATGTCTCTCAACAA
AGATCACCAACGGATCCACTATATTATCGTTCAGCCCAAAGCTTCTTTTC
CCGCGCAGAGCAAGGAGAAGCGGGAGCAACAGCCACCCTGGGACTTTACA
TGTGGGGGGGCCGAGAAATGCCTGGCGGGGACGCCACTCAAGGGAGCACC
CAAGGGACGAATAAGCTCTTAAAGTTTGTGTTAGAAGATGGAGAGGACGA
CTGGACGGAAGGGGGGCACTGGATTACCGTTCCGACCTCGAGTGCCGAGA
CGGAGGACCCTGCATCAGGCGGCCCCGCGGGGAGGAGCGATCACAGCGGT
CTCCTCTACAAGAATGCCACGACGGGGAAGGAATACTTTGTCGTCTACGG
GGGTAGAAAAATCGATGCCAAGGGAAAGGAAGTGGCGGTGGGGGCGGCGG
CGGGCAATTCCATGGCGCGCGAGGTGTTCGGTGACACGTGGTCTCTGGAT
ATGAGCACAAAAGAGTGGACGTTGCTGCACGCAGGGGGGGAGGGCGCAGC
CCCGCCGTCACGCTTTCTGCACGCGGCTTCCATCCTGAACGATACCACCA
TGGTCGTCTTCGGGGGGCTGACCTTCTACGGCTCGTCCCTCTTCGCCCTA
GACGACGTCTGGCTCTTCGACTTGCGCCAGCGGACTTGGCAGCCGCAGAA
AATGGAAGTGAACCTATTACGCAGTGCCTTGCCCATGCTGCAGGGCCCCC
TGACGGTCTCTGCGCCCGCTCATGCTCCCATCGACGACCCTGCGGCCGCA
GGATCCGCCGCAGCCGCCACAGCGACGGCCTCAAGCGTTGTCGTCCCGGC
CATGTACGCCTTCGCCGGCTACGTCATCTACACGTCCGCGGGCCTGGCGG
TCGTTTACAACGATCTCCTGGTCTGGGATCCCGCCAAGAACTATTGGCAG
AAACTCGCGAATAAACGGGGCAAGACGGCGCCGGCGCCGCGGTTCGACCA
TCGGGGCCTTGTCTGGCGGGGGAGCACCCTGGTGTTTTACGGGGGGAGCT
ATCAGGACGTGAACGATGTGGGCGACATCTGGATGATCGACACCAGCTTG
ATGGAGGAGAGCCAGCTGGTGAAGGCGCCGCCGGAGGGCTTGAACGCGCT
CTTCGCCGGACGGATGATGTTCATCCTCTCCTCCCTTGTGCTCATGTGCC
TGTGCTCCGCCTTTTTGTCGCTCCGTATGCGCCGACAGATGCTGCAGCGA
GCCAGGGCCGCGGGGGGGGAGGGAGGTGTGCAGGGCGGGCTAGGAGGGGC
AAGGGGGAGTCAGGAGAGGGCGCGGGCGACCGAGGAGGCCCTGCGCTTGT
TGCCAGTCCGGCCGTACTGCCGCAGCAGCAGCGAGGACGAGGCGGGCATG
GCGGAGAGGGGGGGCCAAGGCGACGGGGAGGGAGTCGGAGGGACGGGTGT
CTCGGCGTTGGGAGGGCAAGGGAGAGGCGCGGGGGGGGCGGGGGCGGCGC
TTACTGTCGATAACAAGGACATGTGTGCCATTTGTCTGATGGACTACGTC
GAGGAGGAAATGCTGCGGGAGCTGCCCTGCGGCCACCGCTTCCACGTGGG
CTGCGTCGACCAGTGGTTCCGCTCCTCGGGCAGCCTGTCTTGCCCTATGT
GTAAGGCCCGCGTGGTCGCTACCTCGCCGAGCCTCCTGCCCTCGTCCTCC
ACCTCGACCACGGCCTCCGACATAGCCTCCCCCTACGTCCCTTCCACCGG
CGTCGCCGCCCACGCCCTTTCCTCCCTCCTTTCCAGTCTCAATCCCTTCA
GAGGTCAACGCTTGCAGCGCCTCGCTTCCTCGTCCTCCTCCTCGACCATG
TCTGCCGACGCCGGCGCTCGACAGAGCAACGCCAACCGCTCTACGCCCGG
CTCCATCTCTCCGGTCCTTCCGGCCTCCGCGTCTAGGGTCGGTGCGAGTC
CGGGGCCGAACGGCGTGGCTGCTGGCACTAACAGGGAGGGGGAGGGAGGA
ACGTACCAGCCGCCGGACGATCTGATCCCCTACCACGACATGTCCGTGGT
GGAGATGCAGCAGCCCGTGGCTACCACGCCTTCCGTCCATACACCCGCCC
CGGTCTTCGCCTCCCCGTCGTCCTCATCTCCGAGAAGAAGGAATGACCTA
CCGCCTCGCCCGCCCATGTCGCAACCCCCGGCTGCAGCAGCCACAGTGGG
CACGAGAAACGTAGAGGAGGGGAGGGAGGACGAGAGAGTTGTTTCGCCAA
GAGGGGCCAGCCTCGTGTAA back to top
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