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Properties
| Property Name | Value |
|---|
| Product | F-box domain, cyclin-like protein |
| Orig transcript id | gnl|cribi|Naga_100319g2.4369.mrna |
| Orig protein id | gnl|cribi|Naga_100319g2.4369 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:170974..173391 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9560 ID=rna9560|Name=rna9560|organism=Nannochloropsis gaditana|type=mRNA|length=2756bp
CTCGCTGTTGCTCCATGGCGTAAGGCATATCTACCGATCTTGCAAGGATT
CACTGCTTGCAGTCGAAGCCGGTCTATGCTCTTTCCAGGCTCGCTTTCCC
GGGGACATCTCCCTGCCCAAGTGGCCATCAAGGTGCTCAATCTTTATACA
TTATACTTCATTCTTATATTCGTAATCAGTTCACTGCTCACGTTTTTTCA
TTTTCCTCTCGCGTAACTGGGTTGTCTCACGGCTCACCTCCTGTGAATTG
AAGACGACCTTGCAGGAGCAAGCCAGTATTCCTCGGGTCCTTTACAACAC
CCCAAAGCTAATAAACAATGGTCGCAGAAGTCAAGGCAGTCTTAAATGGT
AAAGATTTAAACAACGGTAGCAGTAAAGGCGTGTTAGCTATACCCAAGGC
TGTCGAATTAGCGCAAAAAGAGGAGGAAGATGTTATCACAACCACAAAGG
TGGAACCCGCCTCAGGGCCGGCAACAACGCAACAGAATGTCACGTCGAGT
AAGAAAAAGAAAACAGCAGCCAGCAAAAAAGAGCAGACTCTGACACAACA
GGATAGCAAGGGCACTGCAAACAAAGAGAACGACAAGGTATCTGAGAAGA
CTGAGGAGACGAGCGGGAAGGCCGAGACTCATGAGGCCTCGGCCGGTAGT
GCAAGCATCTCAGCAATGAAACCGAAAAACAATGCCATCAAGTCCTCCAT
CTCTGCGAATGGCGCAGTGGCCAATGTAACCAAGGAAGTCCAGACGTCTT
CAGCCACCAACAAGAACGTCCCACCATCACAGCAACCACAACGAGTGCAG
CAAACGCAGCAACGCACTCTGCCGTTTCAGCCCTACGCCGGTATTCCTCC
CTTCAACCAGCTTCGCGAGACAAATTTGCAGGATTGGCCCCCGGACCGCG
GCCTGACTTTTATTCGCCCCTGCCCCAGCGGGACTTCCTCACTGGAGAAG
TTGAGCATGCTGAAAAACTGTCCGCAGATTCTCGCCTACATTCAATCATT
CTCGGGGGCTGATTGGATGGAAGCCACGTTCTCCCCACAACCTTGCATTC
GCTTGACGGCCACCACACAGATGCCCGGGGGGAAAGCGACGGCTGAGGCG
ATCCTGCGCCTCTCGGACGAGATGGTTCTACAGTGGCTTCATCGCTTCGA
CCCCCAGATGCCGATATGGGCTATGTTCGTGTGCCCCGCCATGCTGTCGG
GGCTGATGGTGGGCAAGCAAGCCGTGAATCTGAAGAAGATCGAGGAAAGT
TCCTCTGCACGTGTGTGGGCGGCGCCGCGGGACTCGGAGGCGCAGTACGT
GAGCTTCTTCATTTGCAGCAATAACTATGAAGCGACACGCAGCGCCTATG
CCCTCTTGGAGGCGCGGGCGCACAATCAAATGGAAATGGCCATGACCAGC
GTCCAGCACCCACCCCCACCTCCCCCACCCCTCTCCTCCGTTGCTCCAAC
CGCCCCGGCCAAAGCCAGCGGGGCCGGATCGCGGCCCGTCCCTAGCGCCT
CCGCCCCCTCGGAGGGTACGGAGGTGGCACTAGCCCGCCTCGCCATTCCA
TCCCCGCCCGCTGACGACGACACTTCTTCTACTGACATGGAGCCCTCTAC
ACAGCAGTCATCTGGGGACAGCACGCCCCCCGCCACCCATAAATCGGGCA
GACGTGTGCCCCCGCCGTCGTCTCCATCAGGCCGCGCTCGCACGCCCGAT
GGAGGCGCCGCATCACCCTCAGGGCCCGACAGCAAGGCATCAGACAAAGG
CGAGAGCGCCAGCAGCGACGTCCTCGGGGAGGCTGCCAACCTCCAGAGCA
GTACTCCCCAGAAGGAGAGTCAGGCAAAGAAGGGGCCATGAGCAGGACAA
ACCGATGAAGGGGAAAGAGGGGCAGTCGTAGAGAAGCCCAGCGGCCTTCG
GGCCCCGATGGGGGAGCCAAACAATGCGCCAGGTTGACAGAAATATTGCG
CTGCATTGAAAGCAATAGTACGGCTTCTCGGGAGCAAGCATTCTAGAGGA
AAGTTACGGCCGAAGGGTCCGGGAGGAATAACACGAGGACTAGACAGCTT
AAATAAAAAAGGTAGGGAGGGTATCGACCGAACAGTCTTATTTCGATCCC
ATTTGTCCACCGATTAACATTAATCAAGATTGTACCTCAGGATACATTGT
CTCATCACGTGTGTGGCTGCTGAAAATTAATGACATGTGCTTTGCAAATG
GAACATGATTATGACTGGTTCTGATGAACCGAGCAATGAAAGACGTTCTG
GGCGGTCGGGACAGGACAGTCATTCAGAGGAGACAATATTTTCTTTTTAA
GCATTTGATTGTGGCGTAGAGGCGGCACGGCGCAGGGCGGAGTATACATA
TAGCTTACCGAGGAAGTAAGAACCGTAAGTTGGCAAGTGCCCACACTAGA
CGACTGGGAAAAACCAAACACGGCGTTGTCTAAATGCTTGAATTCCGACA
GAGTCGTCCCCTAACCGCTCACTGGGTGCAAATGCGCTCGTAGTGCTAGT
GGCAAGTGTACTCGAGGAAGTGTCGCCGTGGCTCCCAAGAGGTTCACCTC
CATATTTTTGTTGAAATTTTTTCCTCACGTGAACCGAAAGTTGTTGGGCC
TTGCCGTGGCGCCAAACATGAGGAGTGTTGCCAAGTTCTGCAATGCCGCG
TATGGTCACGGCAGTTTGCGTAAGATTTTCGAAACGAAAAACAAATTCGG
GCTCTCGCTTAATCTCCTTTCAAAAAGAAGAAAATCGAAAAAGGGACGGA
AACATG back to topprotein sequence of rna9560 >rna9560-protein ID=rna9560-protein|Name=rna9560|organism=Nannochloropsis gaditana|type=polypeptide|length=424bp
MVLKEFVPHSALCMSSGFSSGKSIPREDSRLSETTPAAGFPASAAGTTAT
ATERGQNEDSTITPASAHSDQEIVVSPHVTKSLLNEDLWIHVLAFLPLVD
VVKGTLEVSRSWNVMAKQNEIWKLFCDKRWPWMALAETQDVGEGGTGEAR
WTNPCATSGSCGRGAAFREPGTLYRLYNQRACARHRVCYPPPLRKFTDFD
LAVDLRSRLTNQVIYSCRGMLDEDGLGVDLFTFSGWVMTTDVVAVDEELL
FENLSAAMAFFGEQGPCELDFTVIDRVNGKVAELATVSRFGTSDGYTGRT
SARATTRCSLGWNVEGQRTEEELWVFLVPDAVFVEGNLRLMRGLTVKVEK
VVGYVGARERDGSGENAQTSQGRKGEESRDREKKTIELVRCRVIEVWMCD
HQYLNAQNMVSLEVARIFDELHWV back to topmRNA from alignment at KK037254.1:170974..173391- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9560 ID=rna9560|Name=rna9560|organism=Nannochloropsis gaditana|type=mRNA|length=2418bp|location=Sequence derived from alignment at KK037254.1:170974..173391- (Nannochloropsis gaditana)
GAGGCTTGCGTGGCGGTGAATGAGGCCCCAGTTCCCGGCCTTAGGAAGGC
CACCGTCTCCAAGAAGCAGTGTACCAATGCCACTTGGTGTCTCCCGAAGG
GCTTCGCTTCATCTGCCGTGCCCTCTGCCGCCAAGCCCACCAACAAGGCC
CAGCCTAAAGCATTTTTGGCTTCAGCAGGCAAGCGAGGGCACCCTATCTC
CAAGAATACTAATGCAAAATTTTTTGTGAATGCTCCATTGACGGGTGAAC
GAGCTTTTTCGAGCAGGACGTCGCATGGAACTTGCAGTTTGTTGTCTGCT
CGGAGACGCTTGAGAAGGTGGGAGCAGCACTCTACTACCTTATTTCTGAT
TCCTTCGTCCGAAGTAGTGGACATTAGGTCCATGAGCATGGGCAAATGCA
AGCGTATGAGGCCTTCTATCCGACTGTCCTCCGCCATAACGAGACGGAAG
AGTAGCTTGTCCAAGTCATCCCTGGTGGGCCCGCTGGGTGAGGCCATACA
GCAAGGGTCCAAAGAACGGCGACAAGGGGCGAATAGGACTTCGACCCCGG
CTAAAATCGCAAAACGCCTCAGTAAAAGGTGTATGTAGCCCCTGTATTCC
AGTGTGTGCATGGATGGTGTTAAAAGGTAAAGGCTTGACTATTGTTCGGG
GCGCATAAACAAGCAAGCCTGAAGGAAGTCGCTTCGCTTTCTCCTGCGTC
ATGCTTGCATGCTCCTCGCCCATCTGTTTTTGACACGCATGCACCCTTTC
ACATGCTCGCATTCACAGAATTTGTTCCACACTCAGCTTTATGCATGTCT
TCTGGTTTTTCGAGTGGAAAGTCGATACCGCGCGAGGACAGCCGCTTGTC
AGAAACTACGCCCGCAGCGGGATTTCCGGCGTCAGCGGCAGGAACAACGG
CAACAGCAACAGAAAGGGGGCAAAATGAAGACTCCACCATCACGCCCGCA
AGTGCGCACTCCGATCAAGAAATCGTCGTCTCTCCTCACGTGACAAAATC
GCTTTTGAATGAGGACCTTTGGATACATGTTCTGGCTTTTTTACCGCTGG
TGGACGTGGTCAAAGGAACCCTCGAGGTCTCAAGAAGCTGGAACGTGATG
GCGAAACAGAACGAAATCTGGAAACTATTTTGTGACAAACGATGGCCGTG
GATGGCTCTGGCGGAAACACAGGACGTTGGGGAAGGAGGGACGGGGGAGG
CACGTTGGACAAACCCATGTGCCACGTCTGGGTCATGCGGGCGGGGCGCG
GCATTTCGAGAACCTGGCACCCTGTATCGCCTCTACAACCAACGGGCTTG
TGCCCGACACCGTGTTTGTTACCCTCCCCCTTTACGAAAGTTCACTGACT
TCGACCTGGCCGTTGATCTCCGGTCGCGGTTGACCAACCAAGTCATTTAT
TCCTGCCGGGGGATGTTGGATGAGGACGGGCTCGGAGTCGACCTCTTCAC
TTTCTCGGGGTGGGTTATGACCACGGATGTCGTGGCCGTTGATGAAGAAC
TCCTCTTCGAGAATTTGTCGGCAGGTACGTGTGGCAGGCGTGTTGGAGGG
GGGGGGGGTCGTGGGCGTTGAAGAGCATGAGTTTCCTGGCCGCCTTTTTG
CACCCGTAGGAATTTGAGCACTTTGTTTTCTGTTTATTTTGAGCAAATAT
GTGCTTTGCAGAGTCTTTCCAAGCCTCACGCTTTCCTTACCCTCTCGAAA
ATTTAGCAGCATGGCACGGTCTCCTCTCCTTGACTCATGCATCCTTGTCT
TTTTTCTGGCACATTCAGCCATGGCTTTTTTCGGAGAGCAAGGACCATGT
GAACTTGATTTCACAGTCATAGATAGAGTGAATGGGAAGGTGGCTGAACT
TGCAACGGTTTCGCGTTTCGGCACATCCGACGGCTACACAGGACGCACCT
CGGCGAGGGCGACAACGCGATGTTCGCTTGGTTGGAACGTGGAGGGCCAG
CGGACCGAGGAAGAGCTGTGGGTCTTCCTTGTACCAGACGCGGTTTTTGT
CGAAGGAAATTTGCGCTTGATGAGGGGTTTGACTGTGAAGGTGGAGAAGG
TGGTAGGATATGTGGGTGCTCGAGAAAGAGATGGCTCCGGCGAGAATGCC
CAGACGTCTCAGGGAAGGAAGGGAGAAGAGTCAAGAGACAGAGAAAAAAA
GACTATAGAGCTTGTTCGGTGTCGGGTAATAGAAGTGTGGATGTGCGATC
ATCAGTATCTCAACGCGCAAAATATGGTTTCACTAGAGGTAGCGAGAATT
TTCGATGAGCTCCACTGGGTATGAAAAAAAACGGTGCAAAAAAATCTCGA
GAGATATCTCAGCAGTAACAAAAAAGCATGTGCTTGTATGTGGTGTGGAC
CATAATTTCTTCTTCATGCTGCGCTTATTAAACCACGCAAACGGCGGAAG
ATGTTCAAAGATTGTTCC back to topCoding sequence (CDS) from alignment at KK037254.1:170974..173391- >rna9560 ID=rna9560|Name=rna9560|organism=Nannochloropsis gaditana|type=CDS|length=3825bp|location=Sequence derived from alignment at KK037254.1:170974..173391- (Nannochloropsis gaditana)
CCATGGCTTTTTTCGGAGAGCAAGGACCATGTGAACTTGATTTCACAGTC
ATAGATAGAGTGAATGGGAAGGTGGCTGAACTTGCAACGGTTTCGCGTTT
CGGCACATCCGACGGCTACACAGGACGCACCTCGGCGAGGGCGACAACGC
GATGTTCGCTTGGTTGGAACGTGGAGGGCCAGCGGACCGAGGAAGAGCTG
TGGGTCTTCCTTGTACCAGACGCGGTTTTTGTCGAAGGAAATTTGCGCTT
GATGAGGGGTTTGACTGTGAAGGTGGAGAAGGTGGTAGGATATGTGGGTG
CTCGAGAAAGAGATGGCTCCGGCGAGAATGCCCAGACGTCTCAGGGAAGG
AAGGGAGAAGAGTCAAGAGACAGAGAAAAAAAGACTATAGAGCTTGTTCG
GTGTCGGGTAATAGAAGTGTGGATGTGCGATCATCAGTATCTCAACGCGC
AAAATATGGTTTCACTAGAGGTAGCGAGAATTTTCGATGAGCTCCACTGG
GTATGAAATTTGTTCCACACTCAGCTTTATGCATGTCTTCTGGTTTTTCG
AGTGGAAAGTCGATACCGCGCGAGGACAGCCGCTTGTCAGAAACTACGCC
CGCAGCGGGATTTCCGGCGTCAGCGGCAGGAACAACGGCAACAGCAACAG
AAAGGGGGCAAAATGAAGACTCCACCATCACGCCCGCAAGTGCGCACTCC
GATCAAGAAATCGTCGTCTCTCCTCACGTGACAAAATCGCTTTTGAATGA
GGACCTTTGGATACATGTTCTGGCTTTTTTACCGCTGGTGGACGTGGTCA
AAGGAACCCTCGAGGTCTCAAGAAGCTGGAACGTGATGGCGAAACAGAAC
GAAATCTGGAAACTATTTTGTGACAAACGATGGCCGTGGATGGCTCTGGC
GGAAACACAGGACGTTGGGGAAGGAGGGACGGGGGAGGCACGTTGGACAA
ACCCATGTGCCACGTCTGGGTCATGCGGGCGGGGCGCGGCATTTCGAGAA
CCTGGCACCCTGTATCGCCTCTACAACCAACGGGCTTGTGCCCGACACCG
TGTTTGTTACCCTCCCCCTTTACGAAAGTTCACTGACTTCGACCTGGCCG
TTGATCTCCGGTCGCGGTTGACCAACCAAGTCATTTATTCCTGCCGGGGG
ATGTTGGATGAGGACGGGCTCGGAGTCGACCTCTTCACTTTCTCGGGGTG
GGTTATGACCACGGATGTCGTGGCCGTTGATGAAGAACTCCTCTTCGAGA
ATTTGTCGGCAGATGGTGTTAAAAGCCATGGCTTTTTTCGGAGAGCAAGG
ACCATGTGAACTTGATTTCACAGTCATAGATAGAGTGAATGGGAAGGTGG
CTGAACTTGCAACGGTTTCGCGTTTCGGCACATCCGACGGCTACACAGGA
CGCACCTCGGCGAGGGCGACAACGCGATGTTCGCTTGGTTGGAACGTGGA
GGGCCAGCGGACCGAGGAAGAGCTGTGGGTCTTCCTTGTACCAGACGCGG
TTTTTGTCGAAGGAAATTTGCGCTTGATGAGGGGTTTGACTGTGAAGGTG
GAGAAGGTGGTAGGATATGTGGGTGCTCGAGAAAGAGATGGCTCCGGCGA
GAATGCCCAGACGTCTCAGGGAAGGAAGGGAGAAGAGTCAAGAGACAGAG
AAAAAAAGACTATAGAGCTTGTTCGGTGTCGGGTAATAGAAGTGTGGATG
TGCGATCATCAGTATCTCAACGCGCAAAATATGGTTTCACTAGAGGTAGC
GAGAATTTTCGATGAGCTCCACTGGGTATGAAATTTGTTCCACACTCAGC
TTTATGCATGTCTTCTGGTTTTTCGAGTGGAAAGTCGATACCGCGCGAGG
ACAGCCGCTTGTCAGAAACTACGCCCGCAGCGGGATTTCCGGCGTCAGCG
GCAGGAACAACGGCAACAGCAACAGAAAGGGGGCAAAATGAAGACTCCAC
CATCACGCCCGCAAGTGCGCACTCCGATCAAGAAATCGTCGTCTCTCCTC
ACGTGACAAAATCGCTTTTGAATGAGGACCTTTGGATACATGTTCTGGCT
TTTTTACCGCTGGTGGACGTGGTCAAAGGAACCCTCGAGGTCTCAAGAAG
CTGGAACGTGATGGCGAAACAGAACGAAATCTGGAAACTATTTTGTGACA
AACGATGGCCGTGGATGGCTCTGGCGGAAACACAGGACGTTGGGGAAGGA
GGGACGGGGGAGGCACGTTGGACAAACCCATGTGCCACGTCTGGGTCATG
CGGGCGGGGCGCGGCATTTCGAGAACCTGGCACCCTGTATCGCCTCTACA
ACCAACGGGCTTGTGCCCGACACCGTGTTTGTTACCCTCCCCCTTTACGA
AAGTTCACTGACTTCGACCTGGCCGTTGATCTCCGGTCGCGGTTGACCAA
CCAAGTCATTTATTCCTGCCGGGGGATGTTGGATGAGGACGGGCTCGGAG
TCGACCTCTTCACTTTCTCGGGGTGGGTTATGACCACGGATGTCGTGGCC
GTTGATGAAGAACTCCTCTTCGAGAATTTGTCGGCAGATGGTGTTAAAAG
CCATGGCTTTTTTCGGAGAGCAAGGACCATGTGAACTTGATTTCACAGTC
ATAGATAGAGTGAATGGGAAGGTGGCTGAACTTGCAACGGTTTCGCGTTT
CGGCACATCCGACGGCTACACAGGACGCACCTCGGCGAGGGCGACAACGC
GATGTTCGCTTGGTTGGAACGTGGAGGGCCAGCGGACCGAGGAAGAGCTG
TGGGTCTTCCTTGTACCAGACGCGGTTTTTGTCGAAGGAAATTTGCGCTT
GATGAGGGGTTTGACTGTGAAGGTGGAGAAGGTGGTAGGATATGTGGGTG
CTCGAGAAAGAGATGGCTCCGGCGAGAATGCCCAGACGTCTCAGGGAAGG
AAGGGAGAAGAGTCAAGAGACAGAGAAAAAAAGACTATAGAGCTTGTTCG
GTGTCGGGTAATAGAAGTGTGGATGTGCGATCATCAGTATCTCAACGCGC
AAAATATGGTTTCACTAGAGGTAGCGAGAATTTTCGATGAGCTCCACTGG
GTATGAAATTTGTTCCACACTCAGCTTTATGCATGTCTTCTGGTTTTTCG
AGTGGAAAGTCGATACCGCGCGAGGACAGCCGCTTGTCAGAAACTACGCC
CGCAGCGGGATTTCCGGCGTCAGCGGCAGGAACAACGGCAACAGCAACAG
AAAGGGGGCAAAATGAAGACTCCACCATCACGCCCGCAAGTGCGCACTCC
GATCAAGAAATCGTCGTCTCTCCTCACGTGACAAAATCGCTTTTGAATGA
GGACCTTTGGATACATGTTCTGGCTTTTTTACCGCTGGTGGACGTGGTCA
AAGGAACCCTCGAGGTCTCAAGAAGCTGGAACGTGATGGCGAAACAGAAC
GAAATCTGGAAACTATTTTGTGACAAACGATGGCCGTGGATGGCTCTGGC
GGAAACACAGGACGTTGGGGAAGGAGGGACGGGGGAGGCACGTTGGACAA
ACCCATGTGCCACGTCTGGGTCATGCGGGCGGGGCGCGGCATTTCGAGAA
CCTGGCACCCTGTATCGCCTCTACAACCAACGGGCTTGTGCCCGACACCG
TGTTTGTTACCCTCCCCCTTTACGAAAGTTCACTGACTTCGACCTGGCCG
TTGATCTCCGGTCGCGGTTGACCAACCAAGTCATTTATTCCTGCCGGGGG
ATGTTGGATGAGGACGGGCTCGGAGTCGACCTCTTCACTTTCTCGGGGTG
GGTTATGACCACGGATGTCGTGGCCGTTGATGAAGAACTCCTCTTCGAGA
ATTTGTCGGCAGATGGTGTTAAAAG back to top
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