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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100108g16.7739.mrna |
| Orig protein id | gnl|cribi|Naga_100108g16.7739 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:149904..151260 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9548 ID=rna9548|Name=rna9548|organism=Nannochloropsis gaditana|type=mRNA|length=2945bp
TTTCCATGTGCTGTTGTTACCTTTCCCTTCTTGCCCATTTCATACCATCG
TCAATATTTAGGCCGCTACCCGTCTGATCCCGAGCATTCAAACCCTAATT
GATCTACTTTTTCGGGACAGGTATGAGCACAAAGGATGAATGGGAAGAAG
TCGTCGACCCGGCCACCCAAAAAACATTTTATGTGAATCATCGGACTCAG
GAGACCCGTTGGCACAAGCCAAATGCAGCCATGCCCCTGCCCGCAGGGTG
GGAGGAAGCGCGCGACGCCGAGGGCCGCATTTACTACATTGACCACGCCA
CTCGCTCAACATCATGGACTGATCCCCGGCGACGCACCAACAGCGGTGGG
GGTGACGTAGGGATGTCTCCACGGCCGCCACCAACCGCCTCTTCCTCCGC
CTCGGGTCCGTCGCGACGGGACCACCACCGGCACCGGAGCACGGGGTCTG
CCGCGTATAACGAGGACCCTTCTCCGCCTATCGGCACAAGCGTTTCTTCC
TCCAGCTCCTCTCCCCACGCCACTAGCGAACGGCGCCACTCCCTCCCCCG
TTTGCCCGCCCTCCTGAACCAGAACCTTCCGTCCTTCACCACGCTCCGTG
GCGGCATAGAGAACGGGGCGGGTACGCTGGGTTTGGTAGGCAATAGTGGT
TTGGCCATGCCCCCAGCAAATCTGGCCGAATTCCAAACATACGATTTGAG
CAGCATGAAGGCTTTGAAAGAGGACGAGGTGGACCCATTCTACGTGCCAG
ATTCCATGCGCTCCGGCTGCTTCCTGTGTCAGGTCAAGTTCCAGCTCGTC
GTCCGCGGCCGGCACCATTGCCGCTGCTGCGGGGAGATCGTCTGCGACAA
ATGCTCGCAGGGCAAACTGGCGCTCCCGCGGGAGCACGAGTCTTTCAAGA
AGGGAGCCGGGGGGGAGCTCGGGCACCGTGTGTGCGACCATTGCCACGCC
CATGTCGCCACCCACGGGAATTTCCGGTGCATGGTCCGGTACGTGACTAC
CCTGAGGGCAGGCAAGGAAGCGAGCACGGCCGCCCAGCGCTACGTGGCCC
TTCGGCTTCTGGTGGAGGCCCTTGAGCCGAGCACGCACTGGAAAGGCGAC
GTGAACCTCGGGAACGACGCCGCCCAGAAAGCTGCCGATTTGGAGACCAG
TGGGGGCGCGCCGGCTATCTGCCAAGCCCTGGCGCCTCTCTTGGACGCAG
CGACCGCCCCACTGCCGGTTCAGGAGATGGCGTTGATTGCCCTCGGTCAT
GTCCTGACCCTGACGGCGCAGCAGCCGGCGCTCAAGTCCTCCTATGCGGC
CCACTTGGCCAACGAATCTCCGGGTATCCTGCCCCGGGTCCTGGACGCCC
TGGACGAACCCGCTTTACAAGAGCACGCGGCCCGCGTCATCTACTACGCG
GCCTCGGAGCCCGTCTGTCAGAAGACGCTCCGGCAGGCCTCGGCCTGGCC
CCGGGTCTTGGACCTGCTAACGAGCCCCGCCGAGGGCGTCCAGCGGTGGG
TGGCGGCCTCCGTGCGCCCCCTGGTGGCGGGGAACCGGGCACTGCTCGAC
TACTTGCTCACGAGCGGGGCCCTCTTCGTCCTGGGATCCTTGCTGTGCTC
GGATCTGCCGGACGTGCAGGCGCACGCCCTGTCCGCCATCTCCGCGGTGA
TCCGGACGGCCTCCACGGTGGAGGGTGAGGAGGAGGAGGAGGGGGAGGAG
GAGGAGGAGGAGGAAGGGACGGAGAGCCAGGGGTACCGGGGGTCCGGGAA
GGAGGACACGCTGGCCGTGACGCAAGTGATCACCATGGTGGCGGACGCGG
GGGCCATGGGGGCCGTGGTCCAGTCCATCGCCTCCCACGACCTCCGGGTA
GCCACGCAGGCGATCAGCCTCGCCGCCCTCATGACGCACCAGTCCAAGGT
GGCGCGCACCCTCTGGGAGGAAGGCGTGATCCGGGCGGTGGTGGAGTTCT
TGACCGCCCACCCCGCGGCAGGGATCAAGACCGTCCAGTGCGCCCTCGCC
ATCTTGAGCAACCTTTCCCGGCTGGGGGGGGAGGGGGGCATCGTTCAGGT
CCACGCGGAAGGGGGCTTGCGCCTGGCCCTCCACTACCTGGACAGCCCCG
ACGTGAGCATCCGCGAGCAGGCCGCGGCCATGCTCCGCTTCTTCTCCCTC
CGCCGCGCCTACGCCCTGGAGATCCTGGAGGCGCCCGAGGGCCTCGTCCG
CCTCGCCGCCCACTTGGACCGAGACGACATGAGCATCGACTCCCCCGTCT
TTCCCGTGCCCCTCTTCTACAACGCCCTCCTCACCCTCGCCCAGGTCGCC
CTTGCCTGCCCCGAGGGCCACCCTGCCCTCCTGCACGCCCTGCATCGCGG
CCTCCTTCCCTCCTGCCTCCCCCTCCTCCAGGCCCGCAACCCCCACGTGG
TCCGACAGACCCTCCGGCTCCTCCACGCCCTGGCCGACACCCACCACCCT
AAAATCTCCGTTCTGCTGCTTGCTGCCCTGGGGTTGGACCAGCTTCCCCC
CGCGTCCTCCTCCTCCTCCTCCCCCTCCCTCTTCCTTCCCCTCCTCCAGC
TAGTGGGCGCGGAGGATCCGAGCGTGGTGGAGGCGGCCCTCCTGCTCCTG
ACCCGCTTGACCGGCGTCTACGCCCCGGCGCCCCCGGAGGAAATGTTCCT
CCCACGACCTTCCTCCGCCCCGCGCGGCGCCTCCCACCCCCACCTGCGCC
AATGGGAGACGCCAGGGCCGCAGTGCCCCGGCGGACCCGCAGGCGCGCCT
CATCCATACGGCGGCCTTGCGCTTGCTCTCTGCCCTGGTTGGCGAGAACC
CGGCGGGGGCGAGGCGATTGGCAGACACAGGAGGCTTGCGGCCCGTGGTT
CGGCTGCTTTCCGATCAGGAGGCTTCGCCCTTTCTGACCACGCTGGCCCT
GGGCATTTTCAAGGAAACGTGCGTGTACGCAGGCCGGACGCCTGA back to topprotein sequence of rna9548 >rna9548-protein ID=rna9548-protein|Name=rna9548|organism=Nannochloropsis gaditana|type=polypeptide|length=119bp
MVSLSSRGGQEGKRRLQLLLPALQAAAAWVKACIPVVVEALRLLDRLCLL
KSVRRGLVALWRADALCLRGCRTGTRTICPFAAGNAVGNSRFACEMLRKG
GHSALTDRVGLPDSVHTSM back to topmRNA from alignment at KK037254.1:149904..151260+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9548 ID=rna9548|Name=rna9548|organism=Nannochloropsis gaditana|type=mRNA|length=1357bp|location=Sequence derived from alignment at KK037254.1:149904..151260+ (Nannochloropsis gaditana)
ATGGTGTCATTGTCCAGTAGGGgtgggcaggaggggaagcggcgcctgca
gctcctgcttcccgctcttcaggcggcggcggcatggGTTAAGGTGCTGG
GGCAGGAccaggtggaggcggagggcgggggggagggagcgggcaggGAC
GACAGAGAAGACGGGCGCGGTAAGGGCTCGGTagaccctcgccctcctcg
gcccGTTCCCCAGGCCTGCATTCCCGTCGTCGTGGAAGCCCTGCGGCTTC
TGGACCGTTTGTGCCTCCTTAAGTCCGTGCGCCGGGGCCTTGTGGCGCTC
TGGCGCGCCGACGCCCTGTGTCTGCGCGggtgggtggcgggggaggggga
cgaggggctTCTCGGCGAGGGCTTCCGGCGTGTGAGCGAGGCCGTGGGTa
tggtggaggacgacccgcgagagggggaggagaggaggcagcgagcGCGA
GGGCAGGCTCGAGAGGGGGtcgggggcccgggggagaagagagggcattg
gaaagaggaaggggcggaggagaaggagggaagggtggaagcAAGAGGGG
ACTCAGGGGCAGCGAGCGCTTtgaaggggggatgggagggcatgggcctT
GCAGGGGAGACGTCGGGCGCCTCCCGGGGCGCGGGTgtacgggaaggggg
gcgagcCACGCAAGGGGGTCGGGGGCGCGAGAGGGGGAGCCGGCGCTTGT
CCCTTCCATTGGAGGGCCACGGGCGAAGAGGCAGGACCCAGGAGACGCAC
CGGGACGGCGAGCGGCGAGACCGAGAGGGCCATCGGGGGGCACGGTCCCT
ggccatccccctccccgcgcatCGGCGGACCCGGAGCGCGGCCGAGGGGG
TGGACACGCCCCCCGACCCGCCGTCCtattcctccctgcccccctcctac
ccctcgCTCCTGACTcacgcacgccctccccgggACAgcatcctcccgcc
ccaccccacctcgtccttctccccgtcctcctccctgtcttcctcctccc
cctcctccccctcctcctcctcctcctcctcctcgctcactcccccccct
caccaGCCCGTCAGGAGCAAGGACGGCCGGACCAGGGTCAGGCCTGGCCG
AGGCACTGCGGCGGATGCTTCCCTTTTaatcctctctcctctcgaAGAGG
GCTCCGAGGAGACCGGCTTCGCGGCCCCTTGTGGCGGCTGCGGGGGCTTG
TTGAAGTTGCCGGACGGGCACGAGGACTATATGTCCATTCGCTGCCGGAA
ATGCGGTGGGAAACTCGCGGTTTGCATGTGAGATGttaaggaagggagga
cacaGCGCTCTGACCGACAGGGTGGGATTGCCTGACAGTGTGCATACTTC
CATGTGA back to topCoding sequence (CDS) from alignment at KK037254.1:149904..151260+ >rna9548 ID=rna9548|Name=rna9548|organism=Nannochloropsis gaditana|type=CDS|length=1080bp|location=Sequence derived from alignment at KK037254.1:149904..151260+ (Nannochloropsis gaditana)
ATGGTGTCATTGTCCAGTAGGGgtgggcaggaggggaagcggcgcctgca
gctcctgcttcccgctcttcaggcggcggcggcatggGTTAAGGCCTGCA
TTCCCGTCGTCGTGGAAGCCCTGCGGCTTCTGGACCGTTTGTGCCTCCTT
AAGTCCGTGCGCCGGGGCCTTGTGGCGCTCTGGCGCGCCGACGCCCTGTG
TCTGCGCGgTTGCCGGACGGGCACGAGGACTATATGTCCATTCGCTGCCG
GAAATGCGGTGGGAAACTCGCGGTTTGCATGTGAGATGttaaggaaggga
ggacacaGCGCTCTGACCGACAGGGTGGGATTGCCTGACAGTGTGCATAC
TTCCATGTGAATGGTGTCATTGTCCAGTAGGGgtgggcaggaggggaagc
ggcgcctgcagctcctgcttcccgctcttcaggcggcggcggcatggGTT
AAGGCCTGCATTCCCGTCGTCGTGGAAGCCCTGCGGCTTCTGGACCGTTT
GTGCCTCCTTAAGTCCGTGCGCCGGGGCCTTGTGGCGCTCTGGCGCGCCG
ACGCCCTGTGTCTGCGCGgTTGCCGGACGGGCACGAGGACTATATGTCCA
TTCGCTGCCGGAAATGCGGTGGGAAACTCGCGGTTTGCATGTGAGATGtt
aaggaagggaggacacaGCGCTCTGACCGACAGGGTGGGATTGCCTGACA
GTGTGCATACTTCCATGTGAATGGTGTCATTGTCCAGTAGGGgtgggcag
gaggggaagcggcgcctgcagctcctgcttcccgctcttcaggcggcggc
ggcatggGTTAAGGCCTGCATTCCCGTCGTCGTGGAAGCCCTGCGGCTTC
TGGACCGTTTGTGCCTCCTTAAGTCCGTGCGCCGGGGCCTTGTGGCGCTC
TGGCGCGCCGACGCCCTGTGTCTGCGCGgTTGCCGGACGGGCACGAGGAC
TATATGTCCATTCGCTGCCGGAAATGCGGTGGGAAACTCGCGGTTTGCAT
GTGAGATGttaaggaagggaggacacaGCGCTCTGACCGACAGGGTGGGA
TTGCCTGACAGTGTGCATACTTCCATGTGA back to top
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