rna9537, rna9537 (mRNA) Nannochloropsis gaditana

Overview
Namerna9537
Unique Namerna9537
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1497
Alignment locationKK037254.1:116203..116460 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100108g5.7747.mrna
Orig protein idgnl|cribi|Naga_100108g5.7747
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:116203..116460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100108g5gene9259Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21162.1cds9506Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9537rna9537-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9537 ID=rna9537|Name=rna9537|organism=Nannochloropsis gaditana|type=mRNA|length=1497bp
TCGCAGGAGTATCTGTCGAGCCTACCATTATGACTCAAATCGACGTACCC
AAGGCGCTGCAGCCGACCGACCAAGACATCCACAAGCTTGTGTTCGCGTC
CGTGCACATCGGGACCAAGAACTCGGACAAGCTCATGGAGCCTTACATCT
GGCGCCGTCGCAGCGACAACACGTACGTCCTGAACTTGGGCAAGACATGG
GAGAAGCTCATTTTGGCTGCCAGGGTCATCGTAGCCGTCGAGAACCCGAA
GGACGTCATCGCCATCTCCGCCCGCCCTTACGGCCAACGAGCCGTCCTGA
AATTTGCCCAGTACACAGGCGCTCAATCGATTGCCGGTCGTTTCACCCCC
GGTACCTTCACGAATCAGATCACCAAGCAATTCCGGGAGCCTCGCCTGCT
GCTGGTCACAGATCCTCGCACGGACTCCCAGGCTGTGCATGAGGCATCCT
ACGTGAACGTGCCTGTCATTGCATTCGCCGACTCGGACTCGCCTTTGCAA
TTTGTGGACATCGCCATCCCCGCCAACAACAAGGGACGGCTCTCCATCGG
TTTGCTGTACTGGCTCCTGGCGCGGGAGGTCCTGCGGCTCCGCGGGACCA
TCAGCCGCGTGGACGAGTGGGACGTGCCTGTCGATCTCTTCTTCTACCGC
GAGCCCGACGAGATCGAGAAGGACGAGGAGAAGCCGGCCACCTTCGCCGC
GGAGGCGGAAATTGCGGAACCTGCACCCATCGCCCCTGGAATCGAGGACT
TTGGGGCGGGAGGCATGGCCGGCGTGGTCCCTGCGTACGGGGAGCCGGTC
TCGGCATCTTGGGATGGAGCGGGGGCGGCGCCTGTGGACCCGGCGGGCGC
GTCGTGGGACCAGCCTGCGGACACGGCGGGATGGACAAACTAGACTGGGG
GAGGAGAAGGGAAGGAGGGAAGCACAGTGGTTTCAGCGGTGCGCGAGAGC
TTTCTGCGGGGGAGGGAGGGTGAGGGTGAGGGTGAGGGTGGGGTGATTTC
GATGGTCGAGGGGTCAGCAGAGAAGGAGCCGTCCGGTGGGAGGAGAGGAA
TGGCGGGCGGGGGCGTGGAGAGAGTTCTTCCTCAGCGGACGCGTCGACAT
CGACGGAGAGACCCCATTAAGAAACCCTGGCAGTTACTATCATGTCTGCA
GTTGTTCGATTCCCCTCTACTGCCTTCGATTGTCGTTATCCCTGCGTGGG
CAGTTATTTTTTTTTAAAGATCTCGCATCTTTTCGTACTTTCCCAACGTG
CTACCATCCTGGTGTTGACCATGGCTAGGAAGGGGCTTCGCGCTTCGAGG
CGACAAAGATAGTCAAGGAAGACAGACCGCGTTGTCGAAGACTTTCCTCG
TTCCCAGCTCGCGCATCTGTTATGGTGCCGCCAGACCATAAGGTGGGTAA
GAAATTTCTTCCTAATGCCGACGCCCTTTCAAGTGGAGACAAGCACGCCT
GTAAGGCCGAACAAAACGAGCACCGACGTCCCGGTCGTGGTCTATAT
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protein sequence of rna9537

>rna9537-protein ID=rna9537-protein|Name=rna9537|organism=Nannochloropsis gaditana|type=polypeptide|length=85bp
MEYCIATVAKGTSMCEEHIARRTGRPWQGIFSPPIRILLTPSSPGGIWWH
RDAVAELYEFYGILASMKLKLHLWLQHMHGGRRES
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mRNA from alignment at KK037254.1:116203..116460-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9537 ID=rna9537|Name=rna9537|organism=Nannochloropsis gaditana|type=mRNA|length=258bp|location=Sequence derived from alignment at KK037254.1:116203..116460- (Nannochloropsis gaditana)
ATGGAGTACTGCATCGCAACGGTCGCAAAAGGGACATCTATGTGTGAGGA GCACATTGCAAGGAGGACGGGACGGCCTTGGCAGGGGATTTTCTCCCCCC CCATCAGAATACTGTTGACTCCATCGAGCCCGGGAGGGATATGGTGGCAT AGAGACGCAGTCGCCGAGCTATATGAGTTTTATGGAATACTCGCAAGTAT GAAGCTGAAACTGCATCTTTGGCTGCAGCATATGCATGGAGGACGACGCG AATCATAG
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Coding sequence (CDS) from alignment at KK037254.1:116203..116460-

>rna9537 ID=rna9537|Name=rna9537|organism=Nannochloropsis gaditana|type=CDS|length=258bp|location=Sequence derived from alignment at KK037254.1:116203..116460- (Nannochloropsis gaditana)
ATGGAGTACTGCATCGCAACGGTCGCAAAAGGGACATCTATGTGTGAGGA
GCACATTGCAAGGAGGACGGGACGGCCTTGGCAGGGGATTTTCTCCCCCC
CCATCAGAATACTGTTGACTCCATCGAGCCCGGGAGGGATATGGTGGCAT
AGAGACGCAGTCGCCGAGCTATATGAGTTTTATGGAATACTCGCAAGTAT
GAAGCTGAAACTGCATCTTTGGCTGCAGCATATGCATGGAGGACGACGCG
AATCATAG
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Synonyms
Publications