rna9530, rna9530 (mRNA) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	rna9530
Unique Name	rna9530
Type	mRNA
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Sequence length	7738
Alignment location	KK037254.1:91690..95574 +

Link to JBrowse

Properties


Property Name	Value
Product	di-glucose binding protein with kinesin motor domain protein
Orig transcript id	gnl\|cribi\|Naga_100111g11.4974.mrna
Orig protein id	gnl\|cribi\|Naga_100111g11.4974
Gbkey	mRNA

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037254.1	supercontig	KK037254.1:91690..95574 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Naga_100111g11	gene9252	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna9530	rna9530-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EWM21175.1	cds9499	Nannochloropsis gaditana (N. gaditana B-31)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KK037254.1:91690..95574+
coding sequence from alignment at KK037254.1:91690..95574+

mRNA sequence

>rna9530 ID=rna9530|Name=rna9530|organism=Nannochloropsis gaditana|type=mRNA|length=7738bp
TCACAGGTTTGTATACATGGCATCAAAATACGTCTGTTGACATCCTGAGG
CCTTTGTTGGGTCGGAGTACCGTCTCTAGGTGCAGTGTCAAGACAAGCAG
GAACTCTAGCAGTGACAGCAGCTCCTGAAGGGACGAGTTCGGTAGCACAG
AGCTATTTTCAGTACCACAGCGATGGCAGATTTGGAAGGAGGAATCGGCA
CAGCAGCGGCCACTATACCTAATCCAGCGGGTGCATCGGCTGACTCTGCA
GCTGCGGCTGATGAGGAATCCCAGCACAATTCCTCCTTTTATCAACCTGG
GAAGGGGAACATCTTAAGCTTCTTCGCCCAGGGTACTTTGACTCCCCCCC
CCTCGAACACTTTCTCTTTTTTGTTCAGCAGCACGAAGAAGAGCGTGGCC
AATAATTCCGTCTTCAAAGCCAACCTTTTCACCAGCCCCGCCTCCTCTGT
GAAAAGCATCAATCTGGACTCTTTGCCCACCCCAATTCCCTCCCGCAAGA
GCCTCGCCGCCTATCTGGAGGAGCAAACCCCCGACAAAGGACCACCCGAA
TCGCTTCTCTCACCGGCAGGCACGCCCTCTGCCCCCCCAGCCCCAGCCGG
AACTACGGATACAGAGCCACGGGCCACGTCAAGGCGCCCCGCCTCGTCGC
CGTCGTTCGTTTTCGCCGCAGCAGAGGAGGCGGCCGAGCCACGCGGGTAC
CGACAGGCGGGATCCGATGCACCAGGAAGCGAGGAAAAGAGCCGACCCAA
GCCCCCGAGTCAAGAGCGATTTGAGCAGTCGGAGCTGCACCGACGCCTTT
CCAAGGGACAGCGTGAAAGGAAGGAACGGCTTGAGATGTTCAAATCAAGG
AAGCAGGAAGACACCGGCCGCCGTGCTTCCACAGGCGGAGTGCTCGATGC
AAGCATGAATACCAGTCTTAATTCAAGTATTCTTGGGAGCACGCACAATA
CCACCCTCTTCTCCAAAGCGGCCGCTCGTCGCCGTTCCTTGCAATTGGAG
GAACAACAGAAAAAAGAGCGCGAAGAACGTCGCAAAAATTATCAGCAGCA
GCGACGAAAAAAGCCCGACAATAAACGGCTGTGCAACTCTGCCCGTCGCC
CTCTTCGTCCGCTTTCCCTCGGAAGCTCAAATCGACGTGCCTCCTTGGCG
GATGCTTCTGGTGTGGGACGGCCTGGGAAAAGTGCCACGCGTCGGATCAG
TACTGGCAGCACCAAAGAAAATTTCTCCTCGGCTGCCAACGTTTCCGGCG
TTGGCCCTGTGGGGAAAGGGCCCAACGCTCTCAAGTCCAAGAAGCCTGCG
GTCACGAGCAACTCTCTTTTCACGCTCAACTTCTCCCCTCCCCCACGTCG
GGTGGAAGACCGGCAGGTGTACAATTATCAAGAGGAATCATCGAAGCGGA
CCTTCATGAAAGCCGGGGGAAGGCGAAGCTCGATGTTTTCGTTGGAATTC
TCTCCACCGGGCAAGCCCGGCCTGACAGGAAGGAGAAAGAAGCGTCCGTC
TTTGGAAATAGAAGACGAGGAGGACGACGACGACACAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGCCAGTGTACCAGAGGAAAAGCACGTC
TCTCCACGCCTTGATGGCTGGCACAGAGAGGGGGCTAAGGAGACCGGGCG
CGAGCCAACGCCACCGGAGACTAGAATCACGGGAGCCGTGGTGGATTTCA
GCGCATCCGCGCAAAAAGACATTGACCTGGAGGAAGGGCGCGGTAGCTTG
GACGCGGATCAACTGTCATCGAAAGATTCACCCTCGACGCCTCAAGTGCC
TGAGAAACAAGGGGATCCGGCGCAAGAGGAACAGGAGCAGGACCAAGAGA
AGCAGGAGAAGGGAGACGAGGATGATCTGGATGGCCCACGTGCCCAAGAC
GACTCGTTTGTGGTGGAGATCGAGGAGCTTCATGGGACAGAAGGGGAAGC
GGCGGCCGCAGAACCGTCGGTCGGTTCGTCGTCCCCAAGCCATGAGGAGC
AACCCGCACACATCTGCGAGCCGATAGCGGACAAGAAAGAAGGCGGGGAC
AGCGCAATGGCGGACGTGACGGCAGCCTTGAATGTAGCCAGCATCTCCTC
TCCTTCCATTGCCGCCACTTCGCCCCCTACCGCTGCGCCTTCGGCCTCTG
CCCGCAGCCCTACGGATGGGTCTAAGCAGACAACGGCCCTATCGTCTCCG
CTCTTGTCTACTGCTACGACGAACATGCAAACGCCGCAACCGCCGCAAAA
TGACCTTCCCACCCCTGGTTTCTCCATGGGGAGTGCTGGCAAGCCCAGGA
ACACTGTAAGCAGCAGCAGCAGGAGCACTAGCAAGGCTCACGCGGAGGGA
CGACCCATCATGGAGCTTCCACCTCTGCCCAGCACACCCTCTTCGGCTGT
CAAGGCCCCGCTTGCTGCCCCGACCTCCGCAGCCTCCTCTGTCTCTTCCC
CGTCAGCCTTCGAAACCTCTCAGCATCGCACGCCCATTTTCGGGCCCCTA
CCCCCCATGTCCGCCTCCCGCTCCCGACCTTCGGCTTCCTCCTCTGCCTC
AGCTGGCAGAACCAATCTGCTTGAGAGTCAGAACAAGAACAAGGGCTCTT
CCTGCACCAAAGAAAACACTTCCAGCAGCAAGGCCTCGCAAAGAAGCCCC
TCTCCGATTTCGCCGACCCGGGCGCAATTGATGGCTACCCTGGATGATTT
GATAGCTGTCGAGCACGAGAAACGCGCCTTGGCAGACAAACTTTTGGAAG
TGGACCAAAGAGCCACTTCTCTTCAGACAGCCCTGGGGAAAGAGACGGCG
GAGGTGCAAAAAGCGCGTGCAGCGGTGGCGGCTGCACAAGCTGTGTGTAC
GGAGAAGGAGACAATGATTGCCGAGCTTCGTTTGCGCGTGGAGGAAACCA
AGACGAAGCTTACGGCCCTGGAAGACCTCCCTGAGAAGGTAGCAGAAGCA
GGCTACGCCTTGGCCACAGCTCAAGCTCAATGCGCGGAAAAGGAAGCGGC
GAAGGCAGCCTTGCAGGCGCGCCTGGAGAGTACTCAGGCCCAGGTCGCAG
CTTTAGAGGACTTCGCACGGAAAGCCCAAGAGTCCGCGGCAGGTTTGGCC
GCCGCTCAGGCGGTTTGTTCCGAGAAAGAACGAGTCGTGGACGCGCTTCA
GGGACAGCTGGAAGACGCCAAGGCGCACATTGCCAGGCTCGAAACGATTC
CTGAGAAAATGGCGGAAAGTCAGCAAGCCTTGTTCACTACTCAGGCACTC
TGTCGCGAAAAAGAAATGTTGGTCGGACACCTGCGGGAGCAGCTTCAGGA
GCAACGCACGCGCCTGGAGGTCCTGGAGAAAGGCTTGCCGGCGGAGCTGG
TGCAAAGTCAGACGGCCTTGGCGACCGCGCAGGCCATGTGTGGGGAGAAG
GATCGGCATGTCGCAGAGCTCAAGGAGCGTCTCGCCACCAAGGAGGCGAC
CTTGGCAGAGCTCGAGTCAATGCCTACGCTTCTACAGCAAGCGAAATGGG
AGCTTGAAGTGGTCCTGAGGAAAAGCGAGGAGAAAGATCGGGCCTTGTCG
GAAGTGCAGGAGCAGCTGAAGTCGTTGGAAGCCAGTTTGGCCGCTGCCGT
CCAGAAAGAGGCCGCGATTGAACGAGAGAAGGAATCGCTCCTACAGCAAT
CGCGGGCGTCTCCAACCGAGGGAAAAGAGATTGTGAAAGTCGAGGTTCCA
GTCCCTTGCCCTGAGACTTTGCAAGCCTTGGAGGCGGCAAAAGCTGCTTG
CTGTGAGAAGGAAGAGGCGGTCGAGGAACTAGAGGAAAGGTTGGCCCAGG
CACAAGCGCGCTTGGCACATTTGGAAAAGCTTCCGCAAGAGATTGAGAGG
ACCCGAGAGGCTTTGGCCACGTCCGAGGCACGCTGCGCCCAGGCAGGCCA
ATTGATGGATACGCTCCAAGAGCAGCTGGAGGAAGCCGTGGCTCGCGTGA
CCGGCTTGGAAGAAGAGAAGACGTCCCTCCTTGCCGAGCAAGCAAAGCTG
CAGGGCCAAGTCGACCAGGTCCAGGCCCAGGCAGAGCAAGTCATGAAGGA
AGCTGCTGCTTCTGCTGGTGCCAGTGACGCTTCTGGGCAGCCGTCGCCAG
CCCAAGTGATGCTGTTGGAGAAGCTGCTTGTGGACCGGCAGGCCAAGGCG
GACACAGACCGCGCGCGTTTGGAAGAAGAAGTGGAGGCCCAACGGGTTGA
GCGCCGGGCCTTAGAGGAGGCCTTGAACATGTTCTTCCTGGCGGGAGGAA
TGCGAGGACTGGCGTCCAAGGAAATGGCCGCCTCTAATGCGCGGAGGGAG
GAGATGATGGAGGCGCGGGCGGAGGCCTTGCGGGTGTTGGTAGAAGAAAG
ACGATCGGCAATGGGCAAAATCCGAGATGTTCAGGAAGAAGCAAAATATG
CCTTGCAGATGAAAGACAGGGCCATGGCATCGATTCAAGCGGAACTGGAG
GAGAAAGAGGGCCACATGGTGGCACTTAAACAACAGCTGGTAGAGGAGCA
GGAGGCGATCGCGACCCTTAACGCCAAATTGACGCATAAAGAAGAAGAAA
TCCAAAAATGGAAGAAACACACGGAAAGGACTGGGCACCAGGAGGAGGAA
GTACAGGCCTTGATGGCCCGGGTGGAGAAAGAGGAAGCCGAGGTCTGTCA
ACTGGATGGGCTGATCCAAGAGAAGGAAAACGATATCGTCAATCTCCAGC
GAGCACTGCGCGAGAAGGAAAACGAACAACGAACCTTAAAAGCAAAGGTC
GAGGAACGAGAGAAAGAGTTGGAGGCGATGCGACAAAAATGGGAGGCGGC
TGAGCGGGAGGGACTGAATCAGCGACGGGTGCGGGAGGAGGTCGAACGGC
AAGTGGAACAGTTGACTGAAAGCCTGACTGGCAAGGAGAAAGAATGCGAC
AGCCTCCGCGGTCGGTTGGCTGCTCAGGCTGAGGATCGGGCGGCGTTGGA
ATCCTTGCAGGATGCTCAGGTCCAGGTGAAAGCCCTGACGGCGACTCTGG
AGAAAAAGAACGCAGATATGAGCGCCTTGAAAGAGCGGGTCTTGGCAGCA
GAGGAAGCAGGAGCTCTGGCCAGGGAAGAAGTTGCTGGGCAGGTGGAGGG
CTTGGAGTCAACGTTGCAGGAGAAGGAGCACGAGCTGAATGGGCTGATGG
ATCGACTGATGGCCGCACAGGAATACAGGGAGGAAATGCAGGGAAAACTG
GCAAGGCTGACGGAGGAGAAGGACAAGGCCGAGGCCGCCGCGGCAAAACT
GAAAGAGGAGGATCGAACCAAGAACGAGGATTTGCAAAGGCTCCTCATGG
ACAAAGAAGAGGTCAAGGCGAAGCTCCAGCGTCTCGAAGAGGAGCAACAG
ACGGCTGCAGCAGCCGTCCGGCAAGTGGAGGCAGAGAAAGAAGCCGTCCT
TGCGGAAGCTCATTCGGCCCAACAGTACGTGCTTGAACTTGAGAAGAAAT
GCAGCGGATTGCACCAGGAGATCGAGAAGGAAGCCCAGGAAAAAAGTCGT
TTGCTATCGGGGAACGAATCCCTCAGCGCGCAGGTACAGGAAAAGGAAAA
AGAACTTGAGGCGTTGGCCCGCAAATTGGTGTTGGCGAAGGACTTGGCTG
CTTCTTTGGAGGAAGAGCTCAATGGAAAAGCGAAAGTCTTGAGTCGAGAG
CTGGTCCCCGAAAGCGGCCAAAGTCAATCCTTCTGTCGCCCTCAGACGCG
CAGTGCCACAGCGGCCGCAAAAGTGGTGGCTGCGTCTACAGACCCGCCAT
ATCCTGCAAGCAATAAATTTGGCGACGGCCGCAAAGACCTGGATGCCCAG
GTGGCGGAGCAGCGTCGGCGCATGTCTTCCATGGTTGAAGAACAGCGGCA
CACTATCGAGGGGCATGCCGCGGAGCTTGCACGAGAAAAAGAGTTACGCG
AGGCGATGGAGCTGCATATGCTCGACGCTCGCGATGCGGCACGAGCCTTG
GAAGCAGATAAAATCCGTTTGAAGGAGGAGATGGAAGAATACAAGAATAG
GGTCATGCGTTTGGAGAAGGAAAAAATGGACATGTCGCACTCGCTGGGAC
GGATGGAGGAAGATTGCGAACGGGCAGACATGGTGCGAAAAACGCTGCAC
AATCAGTTGGTTGAATTAAAGGGGAACATTCAGGTGTTTGTGCGGGTGCG
GCCTCCCTTATCGGAGTCGGGCGAAATGAGGGTCAAGTCTCTGCCTTTTA
AATTCGTCGATTCCGGTGTAGGCGTCGGTACCGCCGGGGAACGCTACTGC
CGTGCTTTGGAGGTCCCAGTGGCAAGGATGCACGAAGATGGATTCGAAAT
GGGGATGGCAGAGAAGAAACGTTTTTGCTACGATCAGGTCTTTACGCCAC
GGACGAGTCAAGATGCTGTGTTTGCGGAAGTTCTACCGCTTGTCCAAAGC
GCCTTGGACGGTTACAAAGTCTGCGTCTTTGCCTACGGCCAAACGGGATC
CGGGAAGACCTACACGATGCTGGGGCCCAATGGCGGCCGCCTGAGCGCAA
GCAGCGGCCACCGTCGCCCAAGTATATCCTCCGCCATGTTGCACGCGGAG
CGAGGGATCGTCTACAGAAGCGTCGAGCATGTCTTCGGGGCCGTGGCTGC
GCTCAGAAAGCATGGATGGCGTTTCGGGTTGTCGGTAGAGATGGTGGAAA
TTTACAACGAGAATTTGCGAGATTTGCTCGCCCCAGACGTGGACGAAGGT
GGCGGTGGCTATTGCTTTGAAAGCTCTGGAGATGGAAACGGCAAAGGCGC
CTTTGCGGCCAGCGCCGACCGCGACTGGCTCGGGGGAAGCCAGGCCACGG
GTAAAGGGAAGAAGAGAGCGAGCAAACGCCTGCAAGTCAAGCACTGTTTC
AGCGCCTCCGCCTCGAACGACGCCATCCCTGGACTCACGTCGCTCCCCGT
GCATTCAGCCTCGGAGGTGGCCGTGTTGGTGTCGGAGGCTCTGGGTCGGC
GTTGCGTGAAGCGAACGCGCAGCAACGCCGACTCTTCCCGTTCCCACGTC
GTTTTCACTCTGAAAATTGAGGCAGAGTCCTCCCGAGGGATCGTGCGACA
TGGTTGCTTACACATGATCGACCTGGCGGGGTCGGAGAGAATGAAGAAGG
CGGACAGTGCGGCCCATCCCGAGCTCTTGCGGGAAGCTCAGAGCATCAAC
AAGTCGTTGAGCGCACTTGGGAACGTGATGACGGCACTGCACAAAAAAGA
GAAGCACGTACCATTCCGGGAGTCCGCCCTGACGAGTCTGTTGCGACACT
CTCTGGGCGGGGACTGCAAGGCTTTGATGGTGTGTAACCTGTCTCCCTCG
GCGTCTTCCTTGCCGGAGAGTCTTCTCTCCCTCCGTTTTGCTCAGAAGGT
GAATGCCGTAGTGACCCACAGAAAATAATGGACATGAATATGGCCAGGAG
GGGCATGGTGGAGAATCAGACGCACTCTTCCGAATGCGGAGAAAGGGAAA
GCTTGGAGGAAAGAAGTTAACGGTAGAGGAACCTGTGACGAGTTTTTAAT
CTTCTCCACAGTATACATCCGAGGAGACTTAGTCAAGCGCAAAAGTTTTA
ATACGTACACACGCAAAGGAAGACTTGAGAAGCGGACCCAGGCACCTTGT
CAAACTGATACTTATTTTCGTTGAGAGGGAAATTATGCCTATGTCGTCGC
CAATCTTAGATCCATGCAAATGCTAAATTTCTACAATTACATCCTATTTA
CATATGTGCTGAGCACAAATAAGAGCTGGGTTGCCTCG

protein sequence of rna9530

>rna9530-protein ID=rna9530-protein|Name=rna9530|organism=Nannochloropsis gaditana|type=polypeptide|length=1140bp
MQNKIQVCCRIRPPRSQELLPPSPSSCAITTSMRGLRPQTHPASPRGDQT
PDTGGVGGKVLAVEALSDVEVGFLDSRNGRGGAWKAFNFDRVWGPEATQE
DVFLDVEALALSVLEGENACILAYGQTGSGKTYTMGGNKGRGEVTAEPGI
TCRLLVKLMELVGRHKGEDGAEEALGLGGEGEGRMQGERVDARTEDGKDR
KHGENAGGKSTLLGYDVSISMVEVYNDEVRDLLPHSAATPSSITSTTSSS
SLPSFTRPASASALPVLEIRQDADHAVRLPGMVEATVESVEGALSLIAHG
DRARSTGATNVHEHSSRSHSIILLTVISRSTGEKGRLYLVDLAGSERVNK
SAVTGTALKEAQHINKSLSALGDVIVALDKKAQHVPYRNSSLTHLLQDCL
GGSARTVMIVTVSSMGETAEETHCTLQFATRVRDIHLAPGRGSRGGRANV
RVKNLERELQVLRGKLMAKETEKIEAEDALSASRKELALLQRQVKSLAEA
KGRVQEERRRGWEEQLKARRSSNEALTTRWQTEKTAREKLAQDLDEAQKM
IKRLQQHTETRGVALTGTRQQLRDKEEEVKELKKALRSVRRELSAAITAS
SLPRGSAISAVQGPSRSTRAMNGPPQIAPIVPGGRRLLEESGECLGDNQV
HDAGSDADPHNTGTHASPALPHPSSSPKATFPTLLDVPSAFDPSAPIAEE
EKVEGKEDNPCKLLFPPEQGRASAHRRPFDGDENDRETSGGAEEEDYLSD
SGATGFMTAVSDLSKSGGGWPFSQRKGHGDSHAKNADGSRAWPRHVTTAF
IHTPTPFFLSSFSSSSPSTFPTTGINASDRALSSPPSSFPALAADSSMPS
RSFAHDLQGHGNARQTKDATAITTPGPLAHSLASSKYFPSEDADPPSLPP
STSTAPATISAQHPALSFPRPPSRLLSPPMPSSDGNPPDDSEEQSPKSSL
SMACQLNPDGGTSHHVTDVQRDIPSVEWHRSRIPSRQVRKPEVIKPSMTL
KPVRGVSGVGKGRGKAVRIPRLAPPHRVGKRRTAVAGNGVQAGDEEDDSG
EGVKEGRLKGGRETGNGARAAWRERKRGDARSHARHIDRAGFKAFPTAST
RPQENPSKEAIRAREELREHDLSVHVPAREKVKSRTARWR

mRNA from alignment at KK037254.1:91690..95574+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna9530 ID=rna9530|Name=rna9530|organism=Nannochloropsis gaditana|type=mRNA|length=3885bp|location=Sequence derived from alignment at KK037254.1:91690..95574+ (Nannochloropsis gaditana)
CGCCCTGCGGCATTATTCGCACAAggtaaggggggaaaaggggggggggg
gctggatgGTTTGCGACTATCatttgaggaggaagcaagcttTTTGAGGT
TCTCAGGCTCCTTGGTTCCGAGGGGGTCGGGGAGACGCCGCTATCGGTCG
AGACCGGCCTGTGGTATTGTCGGGCCCACACCACAGGATCCCATAGCACT
GGGACTGCCACGCCTCACCCTTTCACCGCCATCGCGCCTtgtccccgctc
cctcctctcccccgacAGTACTACGCACAACGATCTTTCAATTCCCGTCT
CCTCGCGCGTCTGCAAGCCATGCAGAACAAAATTCAGGTGTGCTGCCGCA
TCCGCCCACCCAGGAGCCAAGAGCTTCtcccgccatctccctcctcatgc
gctatcaccacctccatgagGGGTCTCCGACCCCAGACCCATCCTGCCAG
CCCGCGCGGCGATCAAACACCCGACACCgggggggttgggggcaAAGTAC
TCGCAGTCGAGGCACTCAGCGACGTGGAAGTCGGCTTCCTGGACTCACGC
AACGGCAGGGGCGGAGCCTGGAAAGCCTTCAATTTCGATCGTGTGTGGGG
TCCCGAGGCCACGCAGGAGGATGTGTttctggacgtggaggccttggcac
tgtcggtgctggagggggagaacgCCTGCATTCTTGCGTACGGACAGACC
GGGTCAGGGAAGACGTACACAATGGGGGGGaacaaagggaggggagaggt
tACGGCGGAGCCTGGCATCACCTGTCGGTTGCTGGTGAAATTGATGGAGT
TGGTTGGGAGgcacaagggagaggacggggcggaggaagcgctggggcta
ggaggagaaggggagggacggatgCAGGGAGAGCGTGTCGATGCTCGCAC
GGAGGATGGCAAGGACAGGAAACACGGAGAGAATGCCGGGGGAAAATCGA
CCCTGTTGGGCTATGACGTGAGCATATCCATGGTCGAAGTCTACAACGAC
GAAGTGCGCGACCTCCTACCGCACTCAGccgccactccctcctccattac
ctctaccacctcctcctcttccctcccctccttcaccagaCCTGCATCCG
CCAgcgcccttcccgtcctggaAATACGGCAAGATGCGGACCATGCCGTC
CGGCTCCCAGGCATGGTGGAAGCCACAGTGGAAAGTGTGGAAGGGGCACT
TTCTCTCATAGCTCATGGCGACCGGGCTCGGAGCACTGGGGCCACTAACG
TGCACGAACACTCGTCGAGGTCGCATTCCATCATTCTCCTGACCGTCATC
TCTCGAAGtacgggggagaagggaaggctTTATTTGGTCGACTTGGCCGG
CTCGGAACGGGTCAATAAGAGCGCGGTGACGGGCACCGCTTTGAAAGAAG
CGCAGCACATCAACAAGTCTCTGTCCGCCCTGGGGGACGTGATTGTGGCC
TTGGACAAGAAGGCCCAGCATGTCCCCTACAGGAACAGCAGTCTGACACA
CCTGCTGCAAGATTGCTTGGGCGGCTCGGCACGAACGGTGATGATTGTCA
CGGTCAGTTCCATGGGCgagacggcggaggaaacgCATTGCACCCTCCAA
TTCGCGACGCGTGTGAGGGACATTCACCTGGCTCCAGGCAGAGGGtcacg
gggagggcgcgccAACGTGCGGGTGAAGAATTTAGAGCGGGAGCTGCAGG
TCCTTCGGGGGAAATTGATGGCAAAGGAGACGGAAAAAATCGAGGCGGAA
GACGCCTTGTCCGCGAGCAGGAAGGAATTGGCTCTCCTGCAGAGGCAAGT
GAAAAGCCTGGCGGAGGCCAAAGGACGGGttcaggaggaaaggcggcgaG
GATGGGAAGAGCAGCTCAAGGCTCGGCGGTCGTCGAACGAGGCTTTGACC
ACGCGGTGGCAGACGGAAAAAACGGCGCGAGAGAAGCTGGCTCAGGACTT
GGACGAGGCGCAGAAGATGATCAAACGCCTTCAGCAGCATACAGAGACGC
GCGGCGTTGCCCTAACGGGTACCCGGCAGCAGCTCcgggacaaggaagag
gaggtgaaagaatTGAAAAAAGCCTTGCGGAGCGTCCGACGGGAGCTGTC
TGCGGCAATAACAGCGTCCTCTTTGCCGCGAGGAAGTGCCATCAGCGCAG
TCCAAGGTCCGTCTCGGTCCACACGCGCAATGAATGGTCCCCCTCAGATT
GCCCCTATTGTCCCGGGCGGACGCCGGCTTCTCGAAGAGAGTGGTGAGTG
CCTGGGGGACAATCAAGTCCACGACGCCGGGAGCGATGCCGACCCGCACA
ATACAGGCACACATGCGTCGCCCGCTTTGCCTcacccgtcctcgtctccc
aaaGCCACATTTCCTACCCTCCTGGATGTGCCCTCCGCCTTCGACCCGTC
GGCCCCGATCgctgaagaagagaaggtcGAAGGCAAGGAAGATAATCCCT
GCaagcttcttttccccccggaGCAAGGGCGGGCGTCGGCTCACCGACGC
CCTTTCGATGGGGACGAGAATGATCGCGAGACAAGTGGAggggccgaaga
ggaggattaCCTTTCGGATAGTGGAGCCACGGGCTTCATGACTGCGGTGT
CTGATCTAAGcaaaagtggaggaggctggccTTTCTCTCAACGGAAAGGA
CACGGTGATTCTCACGCGAAAAACGCCGACGGATCTCGGGCTTGGCCGCG
ACATGTCACGACTGCCTTCATCCACACGCCCAcacccttttttctttcct
ccttttcttcctcctccccaagcACCTTTCCAACCACCGGCATCAATGCG
TCAGATAGagcgctctcctcgcccccctcatcctttcccgcgcTAGCTGC
AgattcctccatgccctctcGGTCTTTTGCACATGATTTGCAAGGCCATG
GCAATGCGCGCCAGACAAAAGACGCCACAGCCATTACGACGCCCGGGCCC
CTCGCACATTCGCTTGCGTCCTCCAAATATTTTCCATCGGAAGACGCaga
tcctccttctcttcctccttcaacgtCTACGGCTCCTGCCACTATTTCCG
CGCAACACCCGGCATTGagttttcctcgtcctccttctcggcttCTGTCC
CCGCCGATGCCGTCTTCCGATGGAAATCCGCCGGATGATTCCGAAGAACA
AAGTCCAAAGAGCAGCCTGTCGATGGCTTGTCAATTAAATCCTGATGGCG
GCACCAGCCATCATGTTACCGACGTCCAAAGGGATATACCGAGCGTGGAG
TGGCATCGTAGCCGCATTCCCAGTCGCCAAGTCCGAAAGCCTGAGGTGAT
CAAACCAAGCATGACCTTAAAGCCTGTACGAGGCGTGAGTGGTGTAGgga
aaggacgagggaaagCAGTTCGCATCCCTCGATTGGCACCGCCGCACCGG
GTTgggaaaagaaggacggCTGTCGCTGGGAACGGTGTCCAGGCtggcga
cgaagaagacgacagCGGAGAAGGCGtaaaagaggggaggctgaaaggag
gaagagaaacagGTAATGGAGCCCGTGcagcgtggagggaaaggaagcgt
gGTGACGCTCGTTCCCATGCACGACATATCGACCGTGCGGGTTTTAAAGC
TTTTCCTACGGCGTCGACCAGGCCGCAAGAAAATCCTTCAAAGGAAGCGA
TCAGGGCGCGGGAAGAGCTTCGGGAGCATGACCTGTCCGTGCACGTGCCA
GCACGAGAGAAAGTCAAAAGCAGAACGGCGCGGTGGCGGTAAAAGTAACG
AAGGCGGCAGTCGAGAGGCGCAATAGACTATGAAACTGGAACCGAGAAAA
ATAAATTGTCTGATAAATCGCGACGCTGACGCACAGGAGAAGAGACAGGA
ACCGTGAAATCGATGAAATTTTACCCCAAATCGCA

Coding sequence (CDS) from alignment at KK037254.1:91690..95574+

>rna9530 ID=rna9530|Name=rna9530|organism=Nannochloropsis gaditana|type=CDS|length=3423bp|location=Sequence derived from alignment at KK037254.1:91690..95574+ (Nannochloropsis gaditana)
ATGCAGAACAAAATTCAGGTGTGCTGCCGCATCCGCCCACCCAGGAGCCA
AGAGCTTCtcccgccatctccctcctcatgcgctatcaccacctccatga
gGGGTCTCCGACCCCAGACCCATCCTGCCAGCCCGCGCGGCGATCAAACA
CCCGACACCgggggggttgggggcaAAGTACTCGCAGTCGAGGCACTCAG
CGACGTGGAAGTCGGCTTCCTGGACTCACGCAACGGCAGGGGCGGAGCCT
GGAAAGCCTTCAATTTCGATCGTGTGTGGGGTCCCGAGGCCACGCAGGAG
GATGTGTttctggacgtggaggccttggcactgtcggtgctggaggggga
gaacgCCTGCATTCTTGCGTACGGACAGACCGGGTCAGGGAAGACGTACA
CAATGGGGGGGaacaaagggaggggagaggttACGGCGGAGCCTGGCATC
ACCTGTCGGTTGCTGGTGAAATTGATGGAGTTGGTTGGGAGgcacaaggg
agaggacggggcggaggaagcgctggggctaggaggagaaggggagggac
ggatgCAGGGAGAGCGTGTCGATGCTCGCACGGAGGATGGCAAGGACAGG
AAACACGGAGAGAATGCCGGGGGAAAATCGACCCTGTTGGGCTATGACGT
GAGCATATCCATGGTCGAAGTCTACAACGACGAAGTGCGCGACCTCCTAC
CGCACTCAGccgccactccctcctccattacctctaccacctcctcctct
tccctcccctccttcaccagaCCTGCATCCGCCAgcgcccttcccgtcct
ggaAATACGGCAAGATGCGGACCATGCCGTCCGGCTCCCAGGCATGGTGG
AAGCCACAGTGGAAAGTGTGGAAGGGGCACTTTCTCTCATAGCTCATGGC
GACCGGGCTCGGAGCACTGGGGCCACTAACGTGCACGAACACTCGTCGAG
GTCGCATTCCATCATTCTCCTGACCGTCATCTCTCGAAGtacgggggaga
agggaaggctTTATTTGGTCGACTTGGCCGGCTCGGAACGGGTCAATAAG
AGCGCGGTGACGGGCACCGCTTTGAAAGAAGCGCAGCACATCAACAAGTC
TCTGTCCGCCCTGGGGGACGTGATTGTGGCCTTGGACAAGAAGGCCCAGC
ATGTCCCCTACAGGAACAGCAGTCTGACACACCTGCTGCAAGATTGCTTG
GGCGGCTCGGCACGAACGGTGATGATTGTCACGGTCAGTTCCATGGGCga
gacggcggaggaaacgCATTGCACCCTCCAATTCGCGACGCGTGTGAGGG
ACATTCACCTGGCTCCAGGCAGAGGGtcacggggagggcgcgccAACGTG
CGGGTGAAGAATTTAGAGCGGGAGCTGCAGGTCCTTCGGGGGAAATTGAT
GGCAAAGGAGACGGAAAAAATCGAGGCGGAAGACGCCTTGTCCGCGAGCA
GGAAGGAATTGGCTCTCCTGCAGAGGCAAGTGAAAAGCCTGGCGGAGGCC
AAAGGACGGGttcaggaggaaaggcggcgaGGATGGGAAGAGCAGCTCAA
GGCTCGGCGGTCGTCGAACGAGGCTTTGACCACGCGGTGGCAGACGGAAA
AAACGGCGCGAGAGAAGCTGGCTCAGGACTTGGACGAGGCGCAGAAGATG
ATCAAACGCCTTCAGCAGCATACAGAGACGCGCGGCGTTGCCCTAACGGG
TACCCGGCAGCAGCTCcgggacaaggaagaggaggtgaaagaatTGAAAA
AAGCCTTGCGGAGCGTCCGACGGGAGCTGTCTGCGGCAATAACAGCGTCC
TCTTTGCCGCGAGGAAGTGCCATCAGCGCAGTCCAAGGTCCGTCTCGGTC
CACACGCGCAATGAATGGTCCCCCTCAGATTGCCCCTATTGTCCCGGGCG
GACGCCGGCTTCTCGAAGAGAGTGGTGAGTGCCTGGGGGACAATCAAGTC
CACGACGCCGGGAGCGATGCCGACCCGCACAATACAGGCACACATGCGTC
GCCCGCTTTGCCTcacccgtcctcgtctcccaaaGCCACATTTCCTACCC
TCCTGGATGTGCCCTCCGCCTTCGACCCGTCGGCCCCGATCgctgaagaa
gagaaggtcGAAGGCAAGGAAGATAATCCCTGCaagcttcttttcccccc
ggaGCAAGGGCGGGCGTCGGCTCACCGACGCCCTTTCGATGGGGACGAGA
ATGATCGCGAGACAAGTGGAggggccgaagaggaggattaCCTTTCGGAT
AGTGGAGCCACGGGCTTCATGACTGCGGTGTCTGATCTAAGcaaaagtgg
aggaggctggccTTTCTCTCAACGGAAAGGACACGGTGATTCTCACGCGA
AAAACGCCGACGGATCTCGGGCTTGGCCGCGACATGTCACGACTGCCTTC
ATCCACACGCCCAcacccttttttctttcctccttttcttcctcctcccc
aagcACCTTTCCAACCACCGGCATCAATGCGTCAGATAGagcgctctcct
cgcccccctcatcctttcccgcgcTAGCTGCAgattcctccatgccctct
cGGTCTTTTGCACATGATTTGCAAGGCCATGGCAATGCGCGCCAGACAAA
AGACGCCACAGCCATTACGACGCCCGGGCCCCTCGCACATTCGCTTGCGT
CCTCCAAATATTTTCCATCGGAAGACGCagatcctccttctcttcctcct
tcaacgtCTACGGCTCCTGCCACTATTTCCGCGCAACACCCGGCATTGag
ttttcctcgtcctccttctcggcttCTGTCCCCGCCGATGCCGTCTTCCG
ATGGAAATCCGCCGGATGATTCCGAAGAACAAAGTCCAAAGAGCAGCCTG
TCGATGGCTTGTCAATTAAATCCTGATGGCGGCACCAGCCATCATGTTAC
CGACGTCCAAAGGGATATACCGAGCGTGGAGTGGCATCGTAGCCGCATTC
CCAGTCGCCAAGTCCGAAAGCCTGAGGTGATCAAACCAAGCATGACCTTA
AAGCCTGTACGAGGCGTGAGTGGTGTAGggaaaggacgagggaaagCAGT
TCGCATCCCTCGATTGGCACCGCCGCACCGGGTTgggaaaagaaggacgg
CTGTCGCTGGGAACGGTGTCCAGGCtggcgacgaagaagacgacagCGGA
GAAGGCGtaaaagaggggaggctgaaaggaggaagagaaacagGTAATGG
AGCCCGTGcagcgtggagggaaaggaagcgtgGTGACGCTCGTTCCCATG
CACGACATATCGACCGTGCGGGTTTTAAAGCTTTTCCTACGGCGTCGACC
AGGCCGCAAGAAAATCCTTCAAAGGAAGCGATCAGGGCGCGGGAAGAGCT
TCGGGAGCATGACCTGTCCGTGCACGTGCCAGCACGAGAGAAAGTCAAAA
GCAGAACGGCGCGGTGGCGGTAA

Synonyms

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