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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100972g1.4015.mrna |
| Orig protein id | gnl|cribi|Naga_100972g1.4015 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:49236..50629 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9518 ID=rna9518|Name=rna9518|organism=Nannochloropsis gaditana|type=mRNA|length=2310bp
CCACGGGCAAGGCGAAGCAGCCAGGGAGGGCGAGGAAGAAGGGGGCAGCC
CGGGAAGGAGAGCAGGCGCTGAGGAGGGCGAGAACCGTGAGGACGAAAGG
AAGCAAGACGGGGAGGGAGGAGTGGATGTCCTTCCCCTCTACGCGATGCT
CCCCCCCAAAGCCCAAGCAGCGGTGTTCCTACCCCCTCCCTCCCCGCGCC
ACCGCCGCATCGTGGTCGCCACCAATGTGGCAGAGACCTCCCTGACTCTT
CCGGGTATCCTGTACGTGGTGGACTGCGGGAGGGTCAAGACCCGGACCTT
CGATCACGCCTCGGGCGTTTCTCGTTACGAAGTGCAATGGATCTCACAGG
CTTCGGCAGACCAGCGGGCAGGTCGTGCAGGACGCACTGGGCCTGGCCAC
TGTTACCGGCTTTATTCCTCGGCGGTTTTTTCTCAACGGCTCAGCCGTTT
CACGGCCCCGGAGATTTTGAACTTGCCGTTAGAAGACGTTTTCTTGCAGA
TGAAAGCCTTGGGCGTGCCCTTGATTGAAAACTTCCCCTTCCCGACGCCT
CCGGAAAAGAAGGCGCTGCAAGCAGCTGGGGCCCTATTGGGAGATCTTGG
GGCCATAGGAAGGAGGGAAGGGGAGAGAGAGGGAGGGTTGACGTCGCTCG
GTCAGGGCATGGCTACCTTGCCGGTAGGGGTGAGGAGTAGCAAAATGCTG
CTCTTGGGCAGGAAAATGTTGGGGAGGGAGGAAGGAAAGGAGGGGGAGGA
GAAGGGAGGAATGGCTCTGGTGGTAGCTTTAGTGGCGGGTTTAAGTGAAA
GAGATCCATTCGTCTTTCCTGATGGAAGGGAGGGAGGAGGAGGGACGCGA
GGAGGGGAAGGCGAGGGCGAAGAAGGCGAAGATGAAGCAGGGGAGGAGGA
CGAGGAGGAGGTCTTGCTTCGGGAGAAGGCCAGAGCCTTGAAGCTGGAAC
GCTTTCGTCAGTGGCATCATCCCACCAGCGATGCCCTCGCAAGGCTCAGG
GCTGTGGGTGCCTACACCTACGCTCACAGCAGAGGAGGTAGTGCCAAGTT
TTGCCGCGAGAACATGCTTCACTCGCCAACGCTTGGCCGCATTTATGATT
TAAGAAAGCAGCTCTCCAGAATATTGAACAGACGATTTGAAAAGCAGCCT
TCCTACATGCCCCTTCATGTCACTCCGGGTATGAAGCCCCCGACGCCCGC
ACAGGAGACGGCGCTGCGACAGGTAGTTTCTCACGAATGGATGGCAGGAT
GGAAGGATGACAGGCGGGAGTGACCTGATTTACCACCAAATGACCATGGG
TCAAAGAGATTAGATACTGAGGTGGGAGGGAAAAAAAATTTGATCAGATT
CCTCCCTTTCTCTTTCCTCCTTAAAAGCTCCTCCTTGCCGGGCACCTGGA
TAATGTGGCCCGCCTGGCGCCCGTGGGGACGGTCACGCAGGGAAGCAAGA
TTCAACGCCATTGCGCGTATATAGGTTGCAAGGCAGCCGTGACAGAACCT
CTGTACATTCACCCGCATTCCTCTCTCTTCTCTCCGAATCCAGAGCGGTT
GCCCCAGTGGGTTTGCTATCAGAATGTCGTCCGCTCCAGCAAGGGCTTGA
ACTACATGGTGTGCGTGACGGCCATAGAGCCCGATTGGTTGGCCCCGCTC
GCCCTCCACACGCCTATGCTAAGCTTCAACCCACCGCTGTCATCACCTCC
TCCCTCTTTCGATCCCTCGCGGGATGCCGTGGTCTTCTATTGCGTGCCTA
AATTCGGAAGTCGTGCGTGGGAGCTTCGGCCATTTCCTTTGACCGCCCAG
GACCTTGTTTCTGCATTATCTTCGCTCCATTCCTCATCTAACAAAATAAA
TAAGGAGTGGAAAGCGGACGCTTTACGCGAAGATGAATGCCGATGGTTCG
TTCGTCTCCTGTTGGAGGGCCAGGTCCTGTCTGGCTGGGCCTGTTTGTAT
CGACAGGCCACCGGGACCGCAAGGCGCACGCATGGCAACGACGACGACGA
AGATGATGGCGACACAGCTATGGAAACTACGTCATTGTTGTCGTCACCCG
TCTTTTTGAATGATCCGCCCGCCCTGATCACGTACAAAAGGCCACTCCGC
AAGGTCCTTGAAGTCGTGCAACCTTTGCTCAACGAAAACATCTCTTCTCT
TGCCGCGTTAAGGAAGCAGTGGTTGAAAGATCCGCTCTTTCTGAAGAGAG
GTATTAAGTTGTGGATACGCCCCGAGCGTAAGACGGATTTTGAGTCGCTT
TGGCGCGAGACTGTTGGGAGACCTACACACGAAGAATAAAAAGAACCTCC
TCTCTCAATA back to topprotein sequence of rna9518 >rna9518-protein ID=rna9518-protein|Name=rna9518|organism=Nannochloropsis gaditana|type=polypeptide|length=209bp
MVAGPQQTYSAVYNRLFVSAPLRRLPHLPPSLLLLLPMLLSSTFTHASSW
TTRRTGLASSLSFSPTRARVLSGPGQGGPCPLPWSVRSLSARRPSSFLLP
FSQGEGAHEDVGVGRNGRGEARRTLCPSWAIRARSRVHASRDIDGHGGGK
EERRVGGKEGGKVGMEPGANGQHQQAEFLNDFLVGMGAREGGREGGWEGG
RRGGREGGR back to topmRNA from alignment at KK037254.1:49236..50629+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9518 ID=rna9518|Name=rna9518|organism=Nannochloropsis gaditana|type=mRNA|length=1394bp|location=Sequence derived from alignment at KK037254.1:49236..50629+ (Nannochloropsis gaditana)
CACTCAAATTTACGTGTGCACGCTCACCACATATGAAAGTCTCTTGCACA
CGAACAGATCTCTGACGTTTACTGTCAGGACATTTTTGCAATACAGGTCG
AAGATCGACTCATTCTCAATCCGAGCCGctagcaaggaggaggccaattG
TTGCTTCTCGAAAGGTATAGGCACTACTACCAGCAGCTAAACCGGTCGAC
gacaggaagacgaggggcgTGATAAATGCGCTACATTCATACAGGTGCGT
GACACGGGAAGAGTCTGCCTCCATTCGCTCTTGCACGGACTTTTCATTGC
CATCTCCCTGGCTCGATCTCTCCGGCCTGCCCTATGTCTGCCGCCCCTCG
CTAACcacccgcctgctccctaGCGTCGTGTAGATTCCCTTGTCCGCACG
CCTTTCGTGTACCGGCATTTATCTGTACACTTCGTGACGATCCCGCTCGT
TTTTAGGATTGGCCTTCGAAGCGTCCTCGGTTTTTAAAGGTCTGGGTGAG
GAGGGTTGAGGGCATCCGTGATAGTTTTACGAAGGACAGTAAGCGGCCAC
AGGCTCAGCAAGAAGTGAAAATAGCGGAACATTGCCTTGACAGGTCTTTT
TGTGCTGGAAACGACCCTGTATCATCTGGGTTGATCTCGCGCGAGCAACG
GGAAGGTAGGACGGCCACCCCTCAAGCATCCTCGTCACGTGCGCCGGGCG
GAAGCAAGCCTGGATATTCCACCGACACGCCCGTCAGCAAGTGAAATATC
TGCATACAACTCTGTGATGGTGGCAGGGCCGCAACAGACCTATTCAGCAG
TTTACAATCGCCTTTTTGTCTCCGCGCCTCTCcggcgcctccctcatctc
cctccctccctcctcctcctcctccccatgctgctctcctccaccttcac
gcatgcctcctcctggaCCACACGTCGCACCGGCCTGGCTTCCTCTCtgt
ctttctcccccacccgGGCGCGCGTCCTCTCTGGcccggggcagggggga
cCATGCCCCCTTCCCTGGTCAGTGCGAAGCCTttccgcccgccgcccctc
ctccttcctccttcccttcagccaaggagaaggcgcacACGAAGACgtgg
gagtggggaggaacggacggggggaggcgcgaaGGACTCTTTGTCCGTCT
TGGGCTATCCGGGCTCGCAGCCGGGTGCATGCGTCGAGGGATATCGATGG
Ccacggaggcgggaaggaggaaaggagagttggagggaaggagggcggaa
aagTGGGAATGGAGCCGGGTGCCAACGGGCAGCACCAACAGGCGGAGTTC
TTGAACGATTTTCtggtggggatgggggcgagggagggagggagggaggg
aggatgggaaggagggaggaggggaggaagggaaggagggaggt back to topCoding sequence (CDS) from alignment at KK037254.1:49236..50629+ >rna9518 ID=rna9518|Name=rna9518|organism=Nannochloropsis gaditana|type=CDS|length=628bp|location=Sequence derived from alignment at KK037254.1:49236..50629+ (Nannochloropsis gaditana)
ATGGTGGCAGGGCCGCAACAGACCTATTCAGCAGTTTACAATCGCCTTTT
TGTCTCCGCGCCTCTCcggcgcctccctcatctccctccctccctcctcc
tcctcctccccatgctgctctcctccaccttcacgcatgcctcctcctgg
aCCACACGTCGCACCGGCCTGGCTTCCTCTCtgtctttctcccccacccg
GGCGCGCGTCCTCTCTGGcccggggcaggggggacCATGCCCCCTTCCCT
GGTCAGTGCGAAGCCTttccgcccgccgcccctcctccttcctccttccc
ttcagccaaggagaaggcgcacACGAAGACgtgggagtggggaggaacgg
acggggggaggcgcgaaGGACTCTTTGTCCGTCTTGGGCTATCCGGGCTC
GCAGCCGGGTGCATGCGTCGAGGGATATCGATGGCcacggaggcgggaag
gaggaaaggagagttggagggaaggagggcggaaaagTGGGAATGGAGCC
GGGTGCCAACGGGCAGCACCAACAGGCGGAGTTCTTGAACGATTTTCtgg
tggggatgggggcgagggagggagggagggagggaggatgggaaggaggg
aggaggggaggaagggaaggagggaggt back to top
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