rna9501, rna9501 (mRNA) Nannochloropsis gaditana

Overview
Namerna9501
Unique Namerna9501
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length627
Alignment locationKK037254.1:8983..10746 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101229g1.10040.mrna
Orig protein idgnl|cribi|Naga_101229g1.10040
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:8983..10746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101229g1gene9222Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21202.1cds9470Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9501rna9501-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9501 ID=rna9501|Name=rna9501|organism=Nannochloropsis gaditana|type=mRNA|length=627bp
ATGGTGAAACTCCAGTCCAGGCAAAAGGTATCCACGGACTCGCTGGCCAC
CACCCTCCCCTCCCCCGCTTCCTCCTCCTCCTCCTCCCTCTCTACCCTCA
CGCTCCCACCCTGCCGGGGTGACGCGTCCCCCTCCCGGCTGTCCTCCACC
TCTTCCTGCTTCTCCTCCTTCACGGACGAGGAGGCGTCTGTGGGCTCCCG
CAAACGCAAAGCGAAATGCTCGTGGGGGAACGAGGGAAGGGAGGGAGGGG
GGGAGGAGGGCACCGAGGAGGGGGAGGGGAGGAGCGGGACCGGGTGGGAC
TGGGCGCACGTAGTGGACCCGGCGGAGATGGTGACAGAGGAGGAGGAGGA
AGAGGAAGGGGGAGAGGAAGGGGAGATATGGGGGGAGGAGCAGGGAGAGC
CTTCCTTTTCTCCCTTGGCGGTCCACATCAACAGAGCCACGAGGCGGGGG
GGGCGTCACTGGCATGAGGGGGGGTGTACGGGTGGGGAGGGGACTGGTGG
AGGGGAGGGTGTGAGAAAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGGAGAGAAACTAATTGGCGACGTACACTCCTGTATGATACGGAAAATA
GAGAGAACGCCGAGACTTGATAAATGA
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protein sequence of rna9501

>rna9501-protein ID=rna9501-protein|Name=rna9501|organism=Nannochloropsis gaditana|type=polypeptide|length=179bp
MKRSKTVGDLVGLGHYERRKLLWAKRQACGVFPVPYPSPSSAALRPLAPS
TLGITDRGEDNDGRGTKFGGASDENGDTSRAQPPFRTHHPLDVAPSCALS
STSLRDLPLSPTAVSAPAPTDPPSTSITSTPGTSPSPAAFPPPHPLWRQS
SGSGVGQEMTSMMSSLTLVRREGGREGGG
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mRNA from alignment at KK037254.1:8983..10746-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9501 ID=rna9501|Name=rna9501|organism=Nannochloropsis gaditana|type=mRNA|length=1764bp|location=Sequence derived from alignment at KK037254.1:8983..10746- (Nannochloropsis gaditana)
CATTACTTTTTCTCAGAAACATCTGAATACTTATCAATCAAAAGCGCTTT
CTTGTCACGACGACTTGTTTCGGCAAGATCCGCTGCTCCCATGGGCCAGA
CTGCCAGGATCGTGGTCAACAAGCAAAAAACGTGCCCACACACAGAAAAC
TCGGGGGGAGGAAACACATGCCACGATGATATTCTTGTTGTTTTTTTTGT
CAACCATGGCATTTACTGCGTGTATGGGCGGTCGGTGGGGTCATGGTTTG
AGTTGAAATCCACTCGATCGTGCCACGCATGCACGGCCATGTGCTTGAAG
CAGCTACCAGGCAGGACTCAGCCTTCTGCTTGAGGTTACCCTGCAGTGTC
AGCCTGTCTGGCACGCAGGGCTTGACCAATGCTTTGCCTGCCATTGTACG
TACATTAATTGCAAGGTAACATGGGCAAGTGTGGCAGGCCTGCGCGGGTT
TGGGGCCAGGGTGTGCTGACGTCAGGAAAGAATCGGAGGGCAATGATCCG
GCTGGAGGGAATCAGCCAGGGACATATAATGTTTCACTTTTCCTGGGGCG
TTGGGATGGTTGAGTGCAGGCCATGTGTACCGGCACGCTTGCGGTTGTAA
GAAAGCATTTGTCGTGTGGTGGTATGACTCTTGAATGGTGTCTTTTGGGT
GCGTGCCTTGTATTTTTAAAATTTATCCCGTGACGGCTTTCTGCCTCGTG
TTGCGGCGTTCTATGGCCCGTGCCGTTTGACCTTGACACGACTTGGAAAT
CAACACCAGGCACAGACAGGCGACCATCCCGCCGATACGTAGACAGTTAC
AAGTACATCCGTGCACTGGGAAGCTTGCATTCGTGGCGTTGGTGTTGCCT
TGTGAGAGTCGTGGCAGTGAACGTTTGAGTAACCTATCAACTTGCGCCTG
GGTTGAGTCGTCAGCATCGATCTCCGCGCCATCGTTTGAGAGAAATAAAT
TGGTAAGAAGCACTGGAATGGCGAAAAATATTGCAACATAGCGCATGGAA
AGACCTTATAAGAAAGAGAAATAGATGGTGTGGTGTCCGGGAAGGATTTT
TGATGCTATCAAAAGTGTTCCAATAGCGCAGGCCTTTCCCTCCCACCCAT
CACCTTCCCTTGTTCCCTTTTTCCATGCACTACGTCTCTGACACGGCAAA
AATTGTCCCCATGTCATCGCTCACCTAACTCCTCGTTCGTCGATATTTCA
CAGACAAGCCAGCAACCTATTTTCTAGATGAAACGGAGTAAAACAGTGGG
CGACCTGGTAGGACTCGGGCACTACGAACGCCGCAAGTTGCTGTGGGCGA
AGCGGCAAGCCTGTGGTGTCTTTCCCGTTCCATACCCATCCCCTTCTTCA
GCTGCTCTTCGCCCTTTGGCCCCGTCCACCTTGGGGATCACAGATCGGGG
GGAGGATAATGATGGAAGAGGGACCAAGTTTGGGGGCGCGAGCGATGAGA
ATGGGGACACTTCCCGCGCGCAACCTCCCTTCCGGACACATCACCCTTTG
GATGTGGCTCCCTCATGCGCCCTTTCTTCCACCTCCCTGCGAGACCTCCC
ACTCTCCCCCACCGCTGTCTCCGCCCCAGCCCCGACCGATCCGCCCTCCA
CATCCATCACGAGCACACCTGGTACATCCCCATCACCAGCCGCCTTCCCC
CCGCCCCACCCGCTTTGGAGGCAATCGTCGGGCTCCGGAGTGGGCCAGGA
AATGACAAGCATGATGTCTTCCTTGACGCTGGTAAGGAGGGAGGGAGGGA
GGGAGGGAGGGGGG
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Coding sequence (CDS) from alignment at KK037254.1:8983..10746-

>rna9501 ID=rna9501|Name=rna9501|organism=Nannochloropsis gaditana|type=CDS|length=537bp|location=Sequence derived from alignment at KK037254.1:8983..10746- (Nannochloropsis gaditana)
ATGAAACGGAGTAAAACAGTGGGCGACCTGGTAGGACTCGGGCACTACGA
ACGCCGCAAGTTGCTGTGGGCGAAGCGGCAAGCCTGTGGTGTCTTTCCCG
TTCCATACCCATCCCCTTCTTCAGCTGCTCTTCGCCCTTTGGCCCCGTCC
ACCTTGGGGATCACAGATCGGGGGGAGGATAATGATGGAAGAGGGACCAA
GTTTGGGGGCGCGAGCGATGAGAATGGGGACACTTCCCGCGCGCAACCTC
CCTTCCGGACACATCACCCTTTGGATGTGGCTCCCTCATGCGCCCTTTCT
TCCACCTCCCTGCGAGACCTCCCACTCTCCCCCACCGCTGTCTCCGCCCC
AGCCCCGACCGATCCGCCCTCCACATCCATCACGAGCACACCTGGTACAT
CCCCATCACCAGCCGCCTTCCCCCCGCCCCACCCGCTTTGGAGGCAATCG
TCGGGCTCCGGAGTGGGCCAGGAAATGACAAGCATGATGTCTTCCTTGAC
GCTGGTAAGGAGGGAGGGAGGGAGGGAGGGAGGGGGG
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Synonyms
Publications