rna9500, rna9500 (mRNA) Nannochloropsis gaditana

Overview
Namerna9500
Unique Namerna9500
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length264
Alignment locationKK037254.1:8108..8871 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101565g1.4694.mrna
Orig protein idgnl|cribi|Naga_101565g1.4694
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:8108..8871 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101565g1gene9221Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9500rna9500-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21205.1cds9469Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9500 ID=rna9500|Name=rna9500|organism=Nannochloropsis gaditana|type=mRNA|length=264bp
ATGAGGCATCTTGAGAAAGGTAGCCGACACATGGGCGAGACATACGTCCA
AGCACGATTTAATCAGGAGGACTGTGGGGATGACAGCATGTGCGCGGCGA
CAGCACAACTAGCAGGCGGCAGAACATCAGGGAGCTCACCAGCCTCTCCG
AATTTCAAAAATATTACGAGACAGCAGCATGGCCAAGAGAGTTATCTGTT
TACGCCTTTTTTTTGTTGGATCAATGCATATTTCTTTGAAATTCTACCGT
CGTGTACCGTCTAA
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protein sequence of rna9500

>rna9500-protein ID=rna9500-protein|Name=rna9500|organism=Nannochloropsis gaditana|type=polypeptide|length=208bp
MVKLQSRQKVSTDSLATTLPSPASSSSSSLSTLTLPPCRGDASPSRLSST
SSCFSSFTDEEASVGSRKRKAKCSWGNEGREGGGEEGTEEGEGRSGTGWD
WAHVVDPAEMVTEEEEEEEGGEEGEIWGEEQGEPSFSPLAVHINRATRRG
GRHWHEGGCTGGEGTGGGEGVRKRGREGGREGGRGEKLIGDVHSCMIRKI
ERTPRLDK
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mRNA from alignment at KK037254.1:8108..8871-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9500 ID=rna9500|Name=rna9500|organism=Nannochloropsis gaditana|type=mRNA|length=764bp|location=Sequence derived from alignment at KK037254.1:8108..8871- (Nannochloropsis gaditana)
ATGGTATTTCGGCACGGAACAGACATGCCGTGTTTGATCGCGACACCCTA
TCTCCACTCTAATCTCCCTCCCTTCCTCCCCTAGGTGAAACTCCAGTCCA
GGCAAAAGGTATCCACGGACTCGCTGGCCACCACCCTCCCCTCCCCCGCT
TCCTCCTCCTCCTCCTCCCTCTCTACCCTCACGCTCCCACCCTGCCGGGG
TGACGCGTCCCCCTCCCGGCTGTCCTCCACCTCTTCCTGCTTCTCCTCCT
TCACGGACGAGGAGGCGTCTGTGGGCTCCCGCAAACGCAAAGCGAAATGC
TCGTGGGGGAACGAGGGAAGGGAGGGAGGGGGGGAGGAGGGCACCGAGGA
GGGGGAGGGGAGGAGCGGGACCGGGTGGGACTGGGCGCACGTAGTGGACC
CGGCGGAGATGGTGACAGAGGAGGAGGAGGAAGAGGAAGGGGGAGAGGAA
GGGGAGATATGGGGGGAGGAGCAGGGAGAGCCTTCCTTTTCTCCCTTGGC
GGTCCACATCAACAGAGCCACGAGGCGGGGGGGGCGTCACTGGCATGAGG
GGGGGTGTACGGGTGGTACGGAAGGGATGGAAGGAATACGCGCTAGGAAG
AGGGAAGACTGGTTGTTGCAGGGGAGGGGACTGGTGGAGGGGAGGGTGTG
AGAAAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGAGAAACT
AATTGGCGACGTACACTCCTGTATGATACGGAAAATAGAGAGAACGCCGA
GACTTGATAAATGA
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Coding sequence (CDS) from alignment at KK037254.1:8108..8871-

>rna9500 ID=rna9500|Name=rna9500|organism=Nannochloropsis gaditana|type=CDS|length=1881bp|location=Sequence derived from alignment at KK037254.1:8108..8871- (Nannochloropsis gaditana)
GGGAGGGGACTGGTGGAGGGGAGGGTGTGAGAAAGAGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGGAGAGAAACTAATTGGCGACGTACACTCCTG
TATGATACGGAAAATAGAGAGAACGCCGAGACTTGATAAATGAGTGAAAC
TCCAGTCCAGGCAAAAGGTATCCACGGACTCGCTGGCCACCACCCTCCCC
TCCCCCGCTTCCTCCTCCTCCTCCTCCCTCTCTACCCTCACGCTCCCACC
CTGCCGGGGTGACGCGTCCCCCTCCCGGCTGTCCTCCACCTCTTCCTGCT
TCTCCTCCTTCACGGACGAGGAGGCGTCTGTGGGCTCCCGCAAACGCAAA
GCGAAATGCTCGTGGGGGAACGAGGGAAGGGAGGGAGGGGGGGAGGAGGG
CACCGAGGAGGGGGAGGGGAGGAGCGGGACCGGGTGGGACTGGGCGCACG
TAGTGGACCCGGCGGAGATGGTGACAGAGGAGGAGGAGGAAGAGGAAGGG
GGAGAGGAAGGGGAGATATGGGGGGAGGAGCAGGGAGAGCCTTCCTTTTC
TCCCTTGGCGGTCCACATCAACAGAGCCACGAGGCGGGGGGGGCGTCACT
GGCATGAGGGGGGGTGTACGGGTGATGGGGAGGGGACTGGTGGAGGGGAG
GGTGTGAGAAAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGA
GAAACTAATTGGCGACGTACACTCCTGTATGATACGGAAAATAGAGAGAA
CGCCGAGACTTGATAAATGAGTGAAACTCCAGTCCAGGCAAAAGGTATCC
ACGGACTCGCTGGCCACCACCCTCCCCTCCCCCGCTTCCTCCTCCTCCTC
CTCCCTCTCTACCCTCACGCTCCCACCCTGCCGGGGTGACGCGTCCCCCT
CCCGGCTGTCCTCCACCTCTTCCTGCTTCTCCTCCTTCACGGACGAGGAG
GCGTCTGTGGGCTCCCGCAAACGCAAAGCGAAATGCTCGTGGGGGAACGA
GGGAAGGGAGGGAGGGGGGGAGGAGGGCACCGAGGAGGGGGAGGGGAGGA
GCGGGACCGGGTGGGACTGGGCGCACGTAGTGGACCCGGCGGAGATGGTG
ACAGAGGAGGAGGAGGAAGAGGAAGGGGGAGAGGAAGGGGAGATATGGGG
GGAGGAGCAGGGAGAGCCTTCCTTTTCTCCCTTGGCGGTCCACATCAACA
GAGCCACGAGGCGGGGGGGGCGTCACTGGCATGAGGGGGGGTGTACGGGT
GATGGGGAGGGGACTGGTGGAGGGGAGGGTGTGAGAAAGAGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGGAGAGAAACTAATTGGCGACGTACACT
CCTGTATGATACGGAAAATAGAGAGAACGCCGAGACTTGATAAATGAGTG
AAACTCCAGTCCAGGCAAAAGGTATCCACGGACTCGCTGGCCACCACCCT
CCCCTCCCCCGCTTCCTCCTCCTCCTCCTCCCTCTCTACCCTCACGCTCC
CACCCTGCCGGGGTGACGCGTCCCCCTCCCGGCTGTCCTCCACCTCTTCC
TGCTTCTCCTCCTTCACGGACGAGGAGGCGTCTGTGGGCTCCCGCAAACG
CAAAGCGAAATGCTCGTGGGGGAACGAGGGAAGGGAGGGAGGGGGGGAGG
AGGGCACCGAGGAGGGGGAGGGGAGGAGCGGGACCGGGTGGGACTGGGCG
CACGTAGTGGACCCGGCGGAGATGGTGACAGAGGAGGAGGAGGAAGAGGA
AGGGGGAGAGGAAGGGGAGATATGGGGGGAGGAGCAGGGAGAGCCTTCCT
TTTCTCCCTTGGCGGTCCACATCAACAGAGCCACGAGGCGGGGGGGGCGT
CACTGGCATGAGGGGGGGTGTACGGGTGATG
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Synonyms
Publications