rna9499, rna9499 (mRNA) Nannochloropsis gaditana

Overview
Namerna9499
Unique Namerna9499
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length646
Alignment locationKK037254.1:7735..8068 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101565g2.4693.mrna
Orig protein idgnl|cribi|Naga_101565g2.4693
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:7735..8068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101565g2gene9220Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9499rna9499-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21204.1cds9468Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9499 ID=rna9499|Name=rna9499|organism=Nannochloropsis gaditana|type=mRNA|length=646bp
AAATAACAGGTGGAGACCATGACGTGCCGCATTCTGGGAGGAAGCCTTAT
TTGGAGGAGAGGTAGTGTAACCAGTGCTGGCAGTCGAAGTCTCGCTGCGT
TAACCTCCTCCACTGCTGCTGCTGTTGCCCCCGCCGGTATTACTTGCAGC
AGCCGCAGACTAAACACCAAGCACAGCAGCACCCTTAGGGATTTTCGCAA
TACGTATGCGTATTCGATAACGGCCTCGTTTCCAAAGAGGGGAAAGTTTC
CCCTTACTTTGCACTTCAGCCACGCCCCTGTCCGAGGCCTCGCATTCTGG
TCGCGATCTCCGCCCCCCCCTCCTTCCCAATCTGCACCTCCCACATCCCC
TCCATCCTCATCAGACACCCCTGCCTTGACCACCATCTACGAAGAATCGA
CATTTGCATCCCCTTCAGAGACCATCGCGCCCATAGCTCCCACGCCCCCA
GACTCCCCCTCCGGGATCTCCCCGTTCAGTGACATGGTAAGTAAAGTTAC
GCCGGACCTATCCACCGCCACGGGGGAAGGAACTGCAGTCATGGGGATGG
AATCACTCACGAATTGGCCCCCGGATTTGGTTATTCGGCTCCTGGAGTCT
CTGCACGAAGGGACGGGCTTGCCGTACTGGGCCACCATCGTTGGGG
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protein sequence of rna9499

>rna9499-protein ID=rna9499-protein|Name=rna9499|organism=Nannochloropsis gaditana|type=polypeptide|length=87bp
MRHLEKGSRHMGETYVQARFNQEDCGDDSMCAATAQLAGGRTSGSSPASP
NFKNITRQQHGQESYLFTPFFCWINAYFFEILPSCTV
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mRNA from alignment at KK037254.1:7735..8068-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9499 ID=rna9499|Name=rna9499|organism=Nannochloropsis gaditana|type=mRNA|length=334bp|location=Sequence derived from alignment at KK037254.1:7735..8068- (Nannochloropsis gaditana)
ATGAGGCATCTTGAGAAAGGTAGCCGACACATGGGCGAGACATGTGCATT
AATGCCTGTCATCGGATGAACTTTGGCGTACGAAAATCTTGCTCTGAATA
AGACGAAGGATAGACGTCCAAGCACGATTTAATCAGGAGGACTGTGGGGA
TGACAGCATGTGCGCGGCGACAGCACAACTAGCAGGCGGCAGAACATCAG
GGAGCTCACCAGCCTCTCCGAATTTCAAAAATATTACGAGACAGCAGCAT
GGCCAAGAGAGTTATCTGTTTACGCCTTTTTTTTGTTGGATCAATGCATA
TTTCTTTGAAATTCTACCGTCGTGTACCGTCTAA
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Coding sequence (CDS) from alignment at KK037254.1:7735..8068-

>rna9499 ID=rna9499|Name=rna9499|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at KK037254.1:7735..8068- (Nannochloropsis gaditana)
ACGTCCAAGCACGATTTAATCAGGAGGACTGTGGGGATGACAGCATGTGC
GCGGCGACAGCACAACTAGCAGGCGGCAGAACATCAGGGAGCTCACCAGC
CTCTCCGAATTTCAAAAATATTACGAGACAGCAGCATGGCCAAGAGAGTT
ATCTGTTTACGCCTTTTTTTTGTTGGATCAATGCATATTTCTTTGAAATT
CTACCGTCGTGTACCGTCTAAATGAGGCATCTTGAGAAAGGTAGCCGACA
CATGGGCGAGACATACGTCCAAGCACGATTTAATCAGGAGGACTGTGGGG
ATGACAGCATGTGCGCGGCGACAGCACAACTAGCAGGCGGCAGAACATCA
GGGAGCTCACCAGCCTCTCCGAATTTCAAAAATATTACGAGACAGCAGCA
TGGCCAAGAGAGTTATCTGTTTACGCCTTTTTTTTGTTGGATCAATGCAT
ATTTCTTTGAAATTCTACCGTCGTGTACCGTCTAAATGAGGCATCTTGAG
AAAGGTAGCCGACACATGGGCGAGACAT
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Synonyms
Publications