rna9497, rna9497 (mRNA) Nannochloropsis gaditana

Overview
Namerna9497
Unique Namerna9497
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length715
Alignment locationKK037254.1:6029..6527 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103245g1.10303.mrna
Orig protein idgnl|cribi|Naga_103245g1.10303
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:6029..6527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103245g1gene9218Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9497rna9497-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21207.1cds9466Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9497 ID=rna9497|Name=rna9497|organism=Nannochloropsis gaditana|type=mRNA|length=715bp
CATTTACCAGCCCTAATTCCGGTCAACATTTCCCCTCCCTTGGCGCTATT
CTTCGCAATCGCACATGAATGACAGGCTCCGTGTCCCTTTTCGACCGTCT
GGCAGGAAGTGTGGCGGGGTTCTCATGGCCCCTCCCGCGGTCGCCTGTCC
GGAATGCCGCAGTCCCTGTGCATGGCGCATTACGAAAAAAGACGGGCCCA
ATAAAGGTCGTGGCTTTTGGGTGTGTACCAACGCAGGAATTTGCGGTAAA
TTTTTTCGGTGGGCCAATCCAGGGGAGAGTGCTCCGCCCTCCTCTCCTAC
TGGACGTCTGCCCTTCACTTCCGCTTCGTCCCCTGAGGGAGCGACACCCA
GCAATGGGAACGGGGGCAATACTTCCACCTCTTATTTCTTAAAGAGGCTC
GAGCATGGCAACAGGCTTCCAGGTGGAGGCTTCAAAAATGGCGTCGCTTC
CTCCCAGGATGCCTTATCACCGTCCAGGGCCCAGGCAAGCTCCACGGATT
TGGCCGTAGCCAAGCCAAGTGCCTTCCATACTTTCCCTGTCAATCCCTCA
GCTTACGGAGAAAGGACACCGACCCCCGCGTTAAACAAGCCCACGGGCAT
GACGGTGGAGTTCAAGCTGCACGCGCTGCAGCCGGTGCCCACGCTTGCCT
TGGCTCACCCTTATTCAGACCGTTTGGTCACGGCGTACAAGGAAAAGATC
CCGGAGGCCAGGTCG
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protein sequence of rna9497

>rna9497-protein ID=rna9497-protein|Name=rna9497|organism=Nannochloropsis gaditana|type=polypeptide|length=86bp
MTIMRPEMDVITEQIRAVPPGDRQAQMRSKKELYGLFAKYQCSPFRSFVG
PLANIGVFVPMFFGLQKMGDYHVPGARPPSRPPSRL
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mRNA from alignment at KK037254.1:6029..6527-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9497 ID=rna9497|Name=rna9497|organism=Nannochloropsis gaditana|type=mRNA|length=499bp|location=Sequence derived from alignment at KK037254.1:6029..6527- (Nannochloropsis gaditana)
TCACGGCCCGCAATGCCGCCAAAATGACGATCATGCGGCCGGAGATGGAC
GTGATTACCGAGCAGATCAGGGCTGTCCCTCCTGGAGATCGGCAAGCCCA
GATGAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCT
TCCTTCCTTCCCTTTATATCCTTGTACGCGTCCTTCAACCTCTCCCCTTC
CCCTTCGGCCTCCGGCCACATCTTACTGCCCCGTGCATCTCACCCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCAGGTCCAAAAAAGAGCTCTAC
GGCCTCTTCGCCAAGTACCAGTGCTCCCCGTTCCGATCCTTTGTTGGTCC
CCTGGCCAACATCGGCGTCTTCGTCCCCATGTTCTTTGGCCTGCAGAAGA
TGGGCGACTACCACGTGCCAGGTGCCCGCCCTCCCTCCCGCCCTCCCTCC
CGCCTATAGGATGTCTGCAGACCCAGCCTTCCCTCCTCAGGCCCGCTCC
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Coding sequence (CDS) from alignment at KK037254.1:6029..6527-

>rna9497 ID=rna9497|Name=rna9497|organism=Nannochloropsis gaditana|type=CDS|length=522bp|location=Sequence derived from alignment at KK037254.1:6029..6527- (Nannochloropsis gaditana)
GTCCAAAAAAGAGCTCTACGGCCTCTTCGCCAAGTACCAGTGCTCCCCGT
TCCGATCCTTTGTTGGTCCCCTGGCCAACATCGGCGTCTTCGTCCCCATG
TTCTTTGGCCTGCAGAAGATGGGCGACTACCACGTGCCAGGTGCCCGCCC
TCCCTCCCGCCCTCCCTCCCGCCTATAGATGACGATCATGCGGCCGGAGA
TGGACGTGATTACCGAGCAGATCAGGGCTGTCCCTCCTGGAGATCGGCAA
GCCCAGATGAGGTCCAAAAAAGAGCTCTACGGCCTCTTCGCCAAGTACCA
GTGCTCCCCGTTCCGATCCTTTGTTGGTCCCCTGGCCAACATCGGCGTCT
TCGTCCCCATGTTCTTTGGCCTGCAGAAGATGGGCGACTACCACGTGCCA
GGTGCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCTATAGATGACGATCAT
GCGGCCGGAGATGGACGTGATTACCGAGCAGATCAGGGCTGTCCCTCCTG
GAGATCGGCAAGCCCAGATGAG
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Synonyms
Publications