rna9481, rna9481 (mRNA) Nannochloropsis gaditana

Overview
Namerna9481
Unique Namerna9481
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1868
Alignment locationKK037253.1:391565..391774 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_104238g1.954.mrna
Orig protein idgnl|cribi|Naga_104238g1.954
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:391565..391774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_104238g1gene9202Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21223.1cds9450Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9481rna9481-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9481 ID=rna9481|Name=rna9481|organism=Nannochloropsis gaditana|type=mRNA|length=1868bp
GAGGAGGAGGAAGAGGAGGAGGAAGACGAAGACGAGGACGAGGATGAGGA
TGAGGATGAGGATGAGATCGAGGATGAGATCGAGGAGGAGGAGGAGGATG
AGGATGAGGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGATGAG
GAGGAGGATGAGGTCGAGGATGAGGATGAGGATGAGGATGAGGATGAGGA
TGAGGATGAGATCGAGGAGGAGGAGAAGGACGAGGATGTGATTGGCGAGG
TGGACTGGGACGATGACATGACGCAAGCCCAGGATGATGACTTGACGGAT
GACGACGACTACGAGGAGTCGATGGCTGCACTGCAGGCGGCGGAGAAAGA
GGGGGCACTCTCCTCCATCCTGCCCGTGGGCTCCACCGTCCCCGAGGGAG
AGGAGGAGGCCGGGGCCAGCGTCCTCCCCGTGCAGGACACGGAGATGAAG
GAGGATGAGGAAGCCTCCGCCGGCGTCCTTCCTGTCACGCCCGTGGAAGA
TGCCGTGGCCCCCGAGGCGTCGGAGAGCCAGGTCGCCACCCCGCCCTCCC
CAATGAGGACACCGCGCCCCACGAATGCGGTGCCCTTGCCGGAAGCGAGC
GGGGACAAGGAAGCGCCCGAGGCCATCGCCGAGGGGGGAGGCCTCCCAGG
GGGAAATGGCGGGGCCGGGAACGGCGGGGGCATGCCAAACCTGGGTGGGA
TCGGGAATGGGCCGGTGGGAGAGATGGTGAAGGAAGGTGCCTCTAACCTG
GTGGAGGGCTCTTCGCCCATGGCGGGGACGGAGGGGGAGGCCGGGAGCGA
GAGCAACCCCATGAGCGGCGCGGAGGAGGAGGCGCTGGTGGAGGATGCGA
ACGCGAGGGAGGCAGAGAGTGAGGCCACCACCACCACCACCGAGATCCTT
CCCCCCCAGGCCGACGCGGACCCTTCCGCGCAGAGCAATGTGAAGGAGGT
GCTGCCCGTGGAGGACACGGTGCCTGCGGACGGGACCACGGGCGAGGAGA
CCGTCGTCCACTCCGGAGCCGGTCTGGCCCGTACATCCGGGTTGGTTTTG
GCAGCGACGCTGGTGCTGGCTTTGGTCCCTGCCTTGGCACTTTGAACGCC
CCTCTTGGATTGAGAAGTTTCGAGATGAGGAAGGGGTACAGCTTGTGTTT
GCATGGTGACTTTCATTTCGGGCGCTGGGAAGAGAGGAGGAAGGCGTTGG
GCGAGGGAGCGAGGGAGCATCAGGAGATGAGGAAGGAGAGGGAAAAGAAA
AGGAGGAAAGAGCGGACTGAAATGCATAAAAAAAGGAGGAGAAAAAAAGG
AGAAAGCGGGCGGCGGGGAGTGCGGGGGTGGGTCGGGGGGGGGGGGGGGG
GAAGCTTTCGAGCAAGCAGGCTCTATAGGAAGAGGAGACTAGAGCTTCGC
GATTCGACCAAGCTACCGGCCTAAGACTGCATGTCCGATATTGTAATTCC
CGCGCGCCGCAAAAAAGGGGAGAGTCGCCAGTTTTGAGTGTCTTCATCAA
ATTCTCATCGTCTTATTCTGTATCTGTGTGCATGTGGAGAGGGAGATGAG
GAGTCTTCAGGCTTGCCTGGGACCTCCTTGGTCATGCAAAATTGCTCGTT
TAGGGTGCGTGGTTGTGCTTTTCGTAGCTCTTCTTGGTTCAAGGTTGTGA
GAGCCGTAGGAGCGAAGCCATCTCTCCCGCGTCCCTCCCTTGTCTTTTCC
CCTTTCACCGCCTTGTCGACGGGTGGAAGGGGGAAGGAAGATCAAAGGGA
AGGCGTGCGTGAGGCGTGGGCGTGCGGAGAGGGAGGAAGGGCCAGGAGGA
GAGAGGCGCCGTGAACCAAAAAGAAGAAAGAGAGACGGAGAAAATTTCAA
GGCGAGGAGAGAGACTGG
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protein sequence of rna9481

>rna9481-protein ID=rna9481-protein|Name=rna9481|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MTMSRTRSRMMTRRAGMKCTTKRRRLWPPMTMSRTRSRMMTRSLSTHSSE
TMTRRMARRRRSSGTTICR
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mRNA from alignment at KK037253.1:391565..391774-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9481 ID=rna9481|Name=rna9481|organism=Nannochloropsis gaditana|type=mRNA|length=210bp|location=Sequence derived from alignment at KK037253.1:391565..391774- (Nannochloropsis gaditana)
ATGACGATGTCGAGGACGAGGTCGAGGATGATGACGAGGAGAGCTGGGAT GAAGTGTACGACGAAGAGGAGGAGGCTCTGGCCGCCGATGACGATGTCGA GGACGAGGTCGAGGATGATGACGAGGAGCTTGTCGACACATTCTTCGGAG ACGATGACGCGGAGGATGGCGAGGAGGAGGAGGAGCTCGGGGACGACGAT TTGCAGGTGA
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Coding sequence (CDS) from alignment at KK037253.1:391565..391774-

>rna9481 ID=rna9481|Name=rna9481|organism=Nannochloropsis gaditana|type=CDS|length=210bp|location=Sequence derived from alignment at KK037253.1:391565..391774- (Nannochloropsis gaditana)
ATGACGATGTCGAGGACGAGGTCGAGGATGATGACGAGGAGAGCTGGGAT
GAAGTGTACGACGAAGAGGAGGAGGCTCTGGCCGCCGATGACGATGTCGA
GGACGAGGTCGAGGATGATGACGAGGAGCTTGTCGACACATTCTTCGGAG
ACGATGACGCGGAGGATGGCGAGGAGGAGGAGGAGCTCGGGGACGACGAT
TTGCAGGTGA
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Synonyms
Publications