rna9474, rna9474 (mRNA) Nannochloropsis gaditana

Overview
Namerna9474
Unique Namerna9474
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length966
Alignment locationKK037253.1:371635..372676 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100589g2.928.mrna
Orig protein idgnl|cribi|Naga_100589g2.928
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:371635..372676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100589g2gene9195Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9474rna9474-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21229.1cds9443Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9474 ID=rna9474|Name=rna9474|organism=Nannochloropsis gaditana|type=mRNA|length=966bp
ATGGCCCGACGCAATTTTCTTTGCTTACTACACCTGCTGATCCCGACAAT
TGCGCGTGCTCAGGGAGACTTGGAGGGTATCTGGCAAGGCGCAACCACGG
CAGCTAAAGCATGGCTGGACAGCGGCAATTCCCTCCCCTTTCCTGTTGCC
TTTTCTCCTGAAAGTGTGGAGATGTCCAGTGTACATCTGGAGGAGGCCCA
CACACGCATCGCATCGCTCGTCGAAGACAGTAAAATTGGGGGCGCCTCCT
TCTCCGTGATGAAAGACGGAGAGATCGTGACGATGCAGACGTACGGCTAC
GCGAACGTGGAGACGGAGCAACCCATACGAGCGGACACGATTTTCCGGAT
TTTTTCTCAGTCCAAGCCGATCAGCACGGCCGCCTTTCTCACGCTGATAG
ACGAGGGCCTCGTCAGTTACAACGACCCCGTTTCTTTGTACATCCCTGAG
TTCGCCACCATGAAGGTGTACGACCCCATTACCGGCACCAACGTGGCCTT
GGAGCGGCCCATAACCATCTGGCACCTCCTGACCCACACGTCCGGCCTGA
CGTACGGGTTCATGGACAATACGCATGTGGATCAGCTTTACAACAAGAAC
GACATCCTCAACCCGGACGAGGACCTAGCTACCAAAATCAAGCGGGTGGC
CAAACTTCCCCTCACATGCCAGCCTGGCACGAAATGGCAGTACGGCCTCA
GCACCGACGTGCTCCTCCTGATCGCTTCCCTGGTCACCGGACTGCCCATC
GACGAATTCCTCCAGCGGCGCCTCCTCGAGCCCCTAGGGATGACGGACAC
CGGCTTCTATGTGCCTCTGTACAATGCCCACAAGCTCGCCATTGTCTACC
AGCGCAACATGACCGACGGGACCATCCACCGTCCTCCTCCGGACCCCCAC
AACATCCAGCTGGTTGACTATACAAAGAGGCCCAAACATGATGAAATTCG
GACAGATGCTTCTTGA
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protein sequence of rna9474

>rna9474-protein ID=rna9474-protein|Name=rna9474|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MRKQFVYIQAIPAGLELEMALMREERQRDKELKERNTSIVDRRVWENHEI
GVGYQHKNVMRQAVVQHEKVRIKDMTKEKRKKKSAAEQDAEAKKEEEVKA
AAELEAFKRLRALIWRELRGRKRLDALEMEYSMREHGCEETLPSVRSSSD
RFLEEDGQQTKSHRSISPSSLSSARKDKRSKKKKKKQKGR
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mRNA from alignment at KK037253.1:371635..372676-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9474 ID=rna9474|Name=rna9474|organism=Nannochloropsis gaditana|type=mRNA|length=1042bp|location=Sequence derived from alignment at KK037253.1:371635..372676- (Nannochloropsis gaditana)
ATGCGTAAGCAGTTTGTCTATATCCAGGCAATCCCTGCAGGCTTGGAGTT
GGAAATGGCCTTGATGCGGGAGGAGCGACAAAGGGACAAAGAGCTCAAGG
AAAGGTAAGTGCCGCTTGAAAAGAATGAGGGTTACAAGGATAAAGTATTT
TTACAATTGGAATACATATGTCTGGACTATATTCAAGATAAGGCATCGGA
AACAAGCTGAATCATAACATCATTTTACTCATCAGCTTTCCCCTGCGTGA
TCGCATTAGGAATACATCCATCGTAGATCGCAGGGTATGGGAAAATCATG
AGATTGGTGTGGGGTACGTGTGAAGTAGCCAAGAGGAATGGGATTTTGTA
TGAGGGCACGAAAGAGCACAGTCTCCGGAAGTATATGCATCGAGACTCGT
GAGACAGGCGTGAAATCAATTCAGTTTCGCTCATTAATCTATGAGATCTG
ACTTTTGACATATTATACACGTACCTTCTATCTTTATTCTCTGTCCATAG
GTATCAGCACAAAAACGTAATGCGTCAGGCAGTTGTACAGCACGAGAAAG
TGCGAATAAAAGATATGACAAAAGAAAAAAGGAAGAAAAAAAGCGCAGCT
GAGCAGGATGCAGAAGCAAAAAAGGAAGAAGAAGTGGTGCGTATATCTTT
GACCCTATGTTTCAATAAATACATGTGATTGTCGAGTATAAAGACACAGA
AAGACTTTCAAGTCCCTTTCACCCTATTTCATTTGCCATTAAATTCAACG
ATCTAATTCTCAGAAAGCTGCAGCCGAATTGGAGGCCTTTAAGCGGCTTC
GGGCGCTTATATGGCGGGAGTTGCGGGGAAGAAAGCGGCTGGACGCATTG
GAGATGGAATACTCGATGAGAGAACATGGGTGTGAGGAAACGCTACCTTC
AGTAAGATCATCATCCGACCGATTCCTTGAAGAAGATGGCCAGCAAACAA
AAAGTCACCGTTCTATATCCCCTTCCAGCTTGTCATCTGCGCGAAAGGAC
AAGAGGAGCAAGAAGAAAAAGAAGAAACAGAAGGGTAGATGA
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Coding sequence (CDS) from alignment at KK037253.1:371635..372676-

>rna9474 ID=rna9474|Name=rna9474|organism=Nannochloropsis gaditana|type=CDS|length=2292bp|location=Sequence derived from alignment at KK037253.1:371635..372676- (Nannochloropsis gaditana)
AAAGCTGCAGCCGAATTGGAGGCCTTTAAGCGGCTTCGGGCGCTTATATG
GCGGGAGTTGCGGGGAAGAAAGCGGCTGGACGCATTGGAGATGGAATACT
CGATGAGAGAACATGGGTGTGAGGAAACGCTACCTTCAGTAAGATCATCA
TCCGACCGATTCCTTGAAGAAGATGGCCAGCAAACAAAAAGTCACCGTTC
TATATCCCCTTCCAGCTTGTCATCTGCGCGAAAGGACAAGAGGAGCAAGA
AGAAAAAGAAGAAACAGAAGGGTAGATGAGTATCAGCACAAAAACGTAAT
GCGTCAGGCAGTTGTACAGCACGAGAAAGTGCGAATAAAAGATATGACAA
AAGAAAAAAGGAAGAAAAAAAGCGCAGCTGAGCAGGATGCAGAAGCAAAA
AAGGAAGAAGAAGTGGAATACATCCATCGTAGATCGCAGGGTATGGGAAA
ATCATGAGATTGGTGTGGGATGCGTAAGCAGTTTGTCTATATCCAGGCAA
TCCCTGCAGGCTTGGAGTTGGAAATGGCCTTGATGCGGGAGGAGCGACAA
AGGGACAAAGAGCTCAAGGAAAGAAAGCTGCAGCCGAATTGGAGGCCTTT
AAGCGGCTTCGGGCGCTTATATGGCGGGAGTTGCGGGGAAGAAAGCGGCT
GGACGCATTGGAGATGGAATACTCGATGAGAGAACATGGGTGTGAGGAAA
CGCTACCTTCAGTAAGATCATCATCCGACCGATTCCTTGAAGAAGATGGC
CAGCAAACAAAAAGTCACCGTTCTATATCCCCTTCCAGCTTGTCATCTGC
GCGAAAGGACAAGAGGAGCAAGAAGAAAAAGAAGAAACAGAAGGGTAGAT
GAGTATCAGCACAAAAACGTAATGCGTCAGGCAGTTGTACAGCACGAGAA
AGTGCGAATAAAAGATATGACAAAAGAAAAAAGGAAGAAAAAAAGCGCAG
CTGAGCAGGATGCAGAAGCAAAAAAGGAAGAAGAAGTGGAATACATCCAT
CGTAGATCGCAGGGTATGGGAAAATCATGAGATTGGTGTGGGATGCGTAA
GCAGTTTGTCTATATCCAGGCAATCCCTGCAGGCTTGGAGTTGGAAATGG
CCTTGATGCGGGAGGAGCGACAAAGGGACAAAGAGCTCAAGGAAAGAAAG
CTGCAGCCGAATTGGAGGCCTTTAAGCGGCTTCGGGCGCTTATATGGCGG
GAGTTGCGGGGAAGAAAGCGGCTGGACGCATTGGAGATGGAATACTCGAT
GAGAGAACATGGGTGTGAGGAAACGCTACCTTCAGTAAGATCATCATCCG
ACCGATTCCTTGAAGAAGATGGCCAGCAAACAAAAAGTCACCGTTCTATA
TCCCCTTCCAGCTTGTCATCTGCGCGAAAGGACAAGAGGAGCAAGAAGAA
AAAGAAGAAACAGAAGGGTAGATGAGTATCAGCACAAAAACGTAATGCGT
CAGGCAGTTGTACAGCACGAGAAAGTGCGAATAAAAGATATGACAAAAGA
AAAAAGGAAGAAAAAAAGCGCAGCTGAGCAGGATGCAGAAGCAAAAAAGG
AAGAAGAAGTGGAATACATCCATCGTAGATCGCAGGGTATGGGAAAATCA
TGAGATTGGTGTGGGATGCGTAAGCAGTTTGTCTATATCCAGGCAATCCC
TGCAGGCTTGGAGTTGGAAATGGCCTTGATGCGGGAGGAGCGACAAAGGG
ACAAAGAGCTCAAGGAAAGAAAGCTGCAGCCGAATTGGAGGCCTTTAAGC
GGCTTCGGGCGCTTATATGGCGGGAGTTGCGGGGAAGAAAGCGGCTGGAC
GCATTGGAGATGGAATACTCGATGAGAGAACATGGGTGTGAGGAAACGCT
ACCTTCAGTAAGATCATCATCCGACCGATTCCTTGAAGAAGATGGCCAGC
AAACAAAAAGTCACCGTTCTATATCCCCTTCCAGCTTGTCATCTGCGCGA
AAGGACAAGAGGAGCAAGAAGAAAAAGAAGAAACAGAAGGGTAGATGAGT
ATCAGCACAAAAACGTAATGCGTCAGGCAGTTGTACAGCACGAGAAAGTG
CGAATAAAAGATATGACAAAAGAAAAAAGGAAGAAAAAAAGCGCAGCTGA
GCAGGATGCAGAAGCAAAAAAGGAAGAAGAAGTGGAATACATCCATCGTA
GATCGCAGGGTATGGGAAAATCATGAGATTGGTGTGGGATGCGTAAGCAG
TTTGTCTATATCCAGGCAATCCCTGCAGGCTTGGAGTTGGAAATGGCCTT
GATGCGGGAGGAGCGACAAAGGGACAAAGAGCTCAAGGAAAG
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Synonyms
Publications