rna9463, rna9463 (mRNA) Nannochloropsis gaditana

Overview
Namerna9463
Unique Namerna9463
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1403
Alignment locationKK037253.1:349948..351013 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101897g1.3547.mrna
Orig protein idgnl|cribi|Naga_101897g1.3547
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:349948..351013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101897g1gene9184Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9463rna9463-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21241.1cds9432Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9463 ID=rna9463|Name=rna9463|organism=Nannochloropsis gaditana|type=mRNA|length=1403bp
ATGGCATACGCGAAGCATCATGAGGAAAGTGGCACTTACCTCGAGGACTT
CTTGGAGCGGCTGCAACCTTTGCCTAACGACATTCAAAGGTCCTTCCATT
TGATGCGGGAATTGGATAAGGACGCCACGGAGCTCCACGTCCGTTTGCGG
GGCCTGGAAAAACAGTACTTGGGCCAAGCGAAGCGAAGCCTCCAAGGGGC
GAAGGAGAGCAAGCCGGAGGAACGCCTGAAGCTGGTGGAGGACAAGGAGG
CCTCGGCGGAGATCGCCGACCTTCGCGCCCTGATCATGGCCAAGCAACGG
GAGAAAATCGACGTTGTGAACCAGGTGTCCGACATGATGAAGCACCACAT
GCGCATGCTCAAGGTGGACATGGACAACTTCCAGACCGAGCTGAGGGAAA
CAGGGGAATACGACTTCTTGGGCGCCCGCAAGGACGACGCCGTGGCGTTC
AAGCAGAACGTGTACGAGACGCACTTTGTGCTGGGCAAGGTGGTGAACTA
TCGCGCCGACAGTGGCGCCTACGAAGTGGTGGACGTGGACGACGACTCGC
ACATCTACACCCTCCCCGAGACACAGATCGTACTTCTCAACCCGGGCTCG
GAGGCCCAGCGCCTCAAGTATCAGAAGGGGGACGAGGTCTTCGCGGTGTA
CCCAGAAACGACCTCCTTCTATCTTGGAACGATCGCCCAGCCGCCTCGGA
GGGGCATGGGCCACTCAGGACTGGGACAAGACGTTCCGAAGCTTGCCGTC
CAATTCCAGGACGATGCGGATGAATTCGGGCACACCCCAATCCGGTGGGT
GCCCGTCCAGCACGTCTTTAAAGCCATTTAAGACACAGGGGGGGCATGTG
AGCGAGGGAGGGGCGGGGGGAAGAGGGGAGGTTTAAGGGAGGGATGGAGG
AGGCCTGGAGAGAGGGCACGGATCGTTGGTATGTACATAGCGCTTCGCGT
CCGTGGCACGCAAGCAAAAAAATTAAAGAAAGAAAATGATGTGATTTATA
CATAATGTAAACATGTAGTTTGCAGCGGGCACGGCGAGGGAAACGAGCCG
GGAGGGGCGAGTCTTCCGGTGCCAGAGGGAGGGTTCAGAGACCCCCGCGC
CACCAGCTTGGCCTTCCGTCACCTCGTTACTACAACGATCAACATGGACA
AAGTCTAACCAGGCCTTCTCAGCCTCTCTCCACCCACTGCGGACACCCTC
CTCCATGCCCCTCAAAAGCGCGCGTCGTACCAAGCATGCACCACCGGCGC
CATGACCTCCGTCCAGGCCGCAGGCATGCCCCCTCCCTCCTTCCCGCCCT
CCCCCACGACCACCACCCCTTCCTCCTCGATCCCGTGCACCCGCACCAAG
GCCTCCAGATCCTCCTCTGTCAAAAAGGGATGGCTTCCCCGTCCCTGCAA
CCC
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protein sequence of rna9463

>rna9463-protein ID=rna9463-protein|Name=rna9463|organism=Nannochloropsis gaditana|type=polypeptide|length=269bp
LPPSFPPSFPPSLLQRAVPSAHPLGAVAGILPGPEAPRGDPIPPVHAGTG
PGRHPAHGGWGGREGGEGGEGGLDSRKIPSFSLLPSPSPFSSSKDIRSLT
PLPPSLPPFPPPSGQEELAKAVTSSQSLAWESLITLLTVDIPIIADVPEG
IQPDLGEEGEDGGKDGEEYDPLTAEGDGVEDDVVERGLDSGEVVTFDFEE
DEEEGGEEGGEEGGEEEAVKMVERRQGPKSKKAVRKPAKKQAKGKGGREG
GEEGGQAGAFGVGLDRKGW
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mRNA from alignment at KK037253.1:349948..351013+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9463 ID=rna9463|Name=rna9463|organism=Nannochloropsis gaditana|type=mRNA|length=1066bp|location=Sequence derived from alignment at KK037253.1:349948..351013+ (Nannochloropsis gaditana)
ctccctccttccttccctccctccttccctccctccctcctccagagaGC
GGTGCCCTCGGCTCATCCTTTGGGGGCTGTCGCTGGAATCCTGCCAGGCC
CCGAGGCACCTCGAGGCGATCCGATCCCTCCGGTCCATGCTGGGACGGGA
CCCGGTCGTCATCCTGCCCatggagggtggggagggagggagggagggga
gggaggggagggagggctcgatTCTAGAAAaattccttctttttcccttc
ttccttctccctcccctttttcctcctccaaagacATCCGTAGTctcacc
cccctcccgccctccctcccgccctttccccctccctcagggcAAGAGGA
GCTGGCCAAGGCCGTGACCTCGAGCCAGTCGCTGGCCTGGGAGAGCCTGA
TCACCCTCTTAACCGTCGATATCCCCATCATCGCCGACGTGCCGGAGGGC
ATCCAGCCCGacctgggggaggaaggggaggacggggggaaggacgggga
ggagtACGATCCcttgacggcggagggggatggggtggaagacgacgtgg
tggagaggggattGGACAGCGGGGAGGTGGTCACCTTCGATtttgaagag
gacgaggaggagggaggggaggagggaggggaggagggaggggaggagga
agcggtcaAGATGGTGGAAAGGCGGCAGGGCCCCAAGTCAAAAAAAGCGG
TGAGAAAACCCGCAAAGAAGCAggcaaaggggaagggagggagggagggg
ggggaggagggggggcaggcgggggcctTTGGGGTGGGATTGGACCGGAA
AGGGTGGTGAGGTAGGATGATGCATAACGCCCCAGAACGCCTCCACAACC
CTCGACGAAAGGATGCAACAGCATGCGAGCTCGTCGCAAAAAAGGAGAGA
CAGGATTGTGTACGTATTGCTTTCTCGTTCCGTTGGCTCaccaggagggg
gggggcgcattGCAATGccagggtggaggggagaggtcAACTCAAGGCGG
GAGAGATGCGTCATGTGCACCTTCCCTGCATTTGCGTCCTCGCTTTACCA
CCCCATTAAACACTGC
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Coding sequence (CDS) from alignment at KK037253.1:349948..351013+

>rna9463 ID=rna9463|Name=rna9463|organism=Nannochloropsis gaditana|type=CDS|length=810bp|location=Sequence derived from alignment at KK037253.1:349948..351013+ (Nannochloropsis gaditana)
ctccctccttccttccctccctccttccctccctccctcctccagagaGC
GGTGCCCTCGGCTCATCCTTTGGGGGCTGTCGCTGGAATCCTGCCAGGCC
CCGAGGCACCTCGAGGCGATCCGATCCCTCCGGTCCATGCTGGGACGGGA
CCCGGTCGTCATCCTGCCCatggagggtggggagggagggagggagggga
gggaggggagggagggctcgatTCTAGAAAaattccttctttttcccttc
ttccttctccctcccctttttcctcctccaaagacATCCGTAGTctcacc
cccctcccgccctccctcccgccctttccccctccctcagggcAAGAGGA
GCTGGCCAAGGCCGTGACCTCGAGCCAGTCGCTGGCCTGGGAGAGCCTGA
TCACCCTCTTAACCGTCGATATCCCCATCATCGCCGACGTGCCGGAGGGC
ATCCAGCCCGacctgggggaggaaggggaggacggggggaaggacgggga
ggagtACGATCCcttgacggcggagggggatggggtggaagacgacgtgg
tggagaggggattGGACAGCGGGGAGGTGGTCACCTTCGATtttgaagag
gacgaggaggagggaggggaggagggaggggaggagggaggggaggagga
agcggtcaAGATGGTGGAAAGGCGGCAGGGCCCCAAGTCAAAAAAAGCGG
TGAGAAAACCCGCAAAGAAGCAggcaaaggggaagggagggagggagggg
ggggaggagggggggcaggcgggggcctTTGGGGTGGGATTGGACCGGAA
AGGGTGGTGA
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Synonyms
Publications