rna9450, rna9450 (mRNA) Nannochloropsis gaditana

Overview
Namerna9450
Unique Namerna9450
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1041
Alignment locationKK037253.1:322546..323049 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100908g1.7646.mrna
Orig protein idgnl|cribi|Naga_100908g1.7646
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:322546..323049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100908g1gene9171Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21253.1cds9420Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9450rna9450-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9450 ID=rna9450|Name=rna9450|organism=Nannochloropsis gaditana|type=mRNA|length=1041bp
ATGCGGCAGGCGCAAAGGAGAGAGGCGGAGCTCGAGAGTACTACGGCTGA
CCTGACTGCGTCGCTGGCGGCGAAGCAGCGAGAAATTGAGACTTTGAAAG
CCTCATTCCATGCATTGGGAGACTCGCGCGAGATTGTCGATATGGAGTCA
CAAAGGCTGCAGCAAGAGCTGGAAGCCTCGCGAAACGCGTTGGAAATGGA
GCGACAACACGTCGTCAGCTTGCAACGGGAGCTTCGTGCTCAACAACACG
AGCTCTCGGCGGCAACGGCGGCGTGGCGGGAGGAAAAGGAAGCGCAGGAG
AGCCGTTGGCAGAAAGGTGTGCGGGAACGGGAAGGCCTGGCACAGGCACT
GGCGGAGGAGAGGCAAAAGCGGGAGGAGCTGGAGAGGGCCGGTGCCCAAG
GAGGGGCACAGGGGGGCCGTGTGAGGGAGGAGATGGAGGTTCGGGTCCAG
GCGCTCTCGGAGCAACTTGTGAGGAAACAGGAGGCTTTGGACGCAGCTCT
CTCCAACGTCTACGCCGCAGAGGCCCGATTCAAGGCTTCGGAAGCGCGGG
TAAAAGCCCTGGAATCCCAACTGGCGGCGGCGGATTATGACGTGGAGAGT
CCTGCAGATGATGTAGGCCCCGGTGCAGTACGGAGCCGGGGCCATGTGAA
TGCGATTCACAAGCCGTACCCGTCTTCCTCGTCCTCGTCTTCGTTCTCCC
TCCTTCCTCCGGCCGCAGCCGGACGCCGAGTCGCTTTGGCCCCTCTCAAG
CCCCTCTCACGCCTCCCCTTCCTTAGACCATACCCCGCAGCCGCTGACGT
TGCGGATGGCGTGGACAAAGTTTTTCTTGCCTCCATGCATTACCTTCGGA
CGTTTCCTTGGGTGCGGCTCTCCCTCCTGGCGTACTTGTTCCTTCTCCAC
ATATATGTTTTTTCGGTGGTGGGCTGGCAAGCCGGTAGGATCGAGACGAT
CCATTCGGATACTGGGGGGTCGTTTTTGGAGCCCTCCAATCGAGCTTTCG
TAAAGGATGTGGCCTCGACCAATGGTGGAAATGGGGTGTGA
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protein sequence of rna9450

>rna9450-protein ID=rna9450-protein|Name=rna9450|organism=Nannochloropsis gaditana|type=polypeptide|length=167bp
PSLPPSLPPSLPPSLPPSLPPYSFPSSLLSVLRADEALRGMEEKCLLLTR
LEDDQRLWKEEKEMLQEELEVARSVPIPLSPLLPTSLPFLPLSYFLVSSD
LSRPSLSFVSIQDLVLVDVLISQTAMDLDSLAHLLPSLPPSLPAFPAEPR
TGRGGIEAGGSGIGGGP
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mRNA from alignment at KK037253.1:322546..323049-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9450 ID=rna9450|Name=rna9450|organism=Nannochloropsis gaditana|type=mRNA|length=504bp|location=Sequence derived from alignment at KK037253.1:322546..323049- (Nannochloropsis gaditana)
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTACTCTTTCCCGTCCTCCCTCCTTTCCGTGCTCCGTG
CAGACGAGGCGCTACGTGGCATGGAAGAAAAATGCCTCCTGCTCACGCGT
CTGGAGGACGATCAGCGCCTATGGAAAGAGGAGAAGGAGATGCTTCAAGA
AGAGCTCGAAGTGGCCCGCTCGGTGCCTATACCCCTTTCCCCTCTTCTTC
CTACCTCCCTCCCTTTTCTCCCTCTCTCTTACTTTCTCGTTTCTTCTGAT
CTTTCGCGTCCTTCTCTTTCTTTCGTCTCCATTCAAGACCTAGTGCTGGT
TGATGTCCTCATTTCACAGACGGCCATGGACCTTGACAGCTTAGCTCACC
TCCTTCCCTCCCTCCCTCCCTCCCTCCCTGCCTTCCCCGCAGAACCAAGA
ACGGGGCGTGGAGGGATTGAGGCAGGAGGTTCGGGAATCGGAGGCGGCCC
TTGA
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Coding sequence (CDS) from alignment at KK037253.1:322546..323049-

>rna9450 ID=rna9450|Name=rna9450|organism=Nannochloropsis gaditana|type=CDS|length=504bp|location=Sequence derived from alignment at KK037253.1:322546..323049- (Nannochloropsis gaditana)
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTACTCTTTCCCGTCCTCCCTCCTTTCCGTGCTCCGTG
CAGACGAGGCGCTACGTGGCATGGAAGAAAAATGCCTCCTGCTCACGCGT
CTGGAGGACGATCAGCGCCTATGGAAAGAGGAGAAGGAGATGCTTCAAGA
AGAGCTCGAAGTGGCCCGCTCGGTGCCTATACCCCTTTCCCCTCTTCTTC
CTACCTCCCTCCCTTTTCTCCCTCTCTCTTACTTTCTCGTTTCTTCTGAT
CTTTCGCGTCCTTCTCTTTCTTTCGTCTCCATTCAAGACCTAGTGCTGGT
TGATGTCCTCATTTCACAGACGGCCATGGACCTTGACAGCTTAGCTCACC
TCCTTCCCTCCCTCCCTCCCTCCCTCCCTGCCTTCCCCGCAGAACCAAGA
ACGGGGCGTGGAGGGATTGAGGCAGGAGGTTCGGGAATCGGAGGCGGCCC
TTGA
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Synonyms
Publications