rna9446, rna9446 (mRNA) Nannochloropsis gaditana

Overview
Namerna9446
Unique Namerna9446
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length634
Alignment locationKK037253.1:316061..317200 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101545g2.9946.mrna
Orig protein idgnl|cribi|Naga_101545g2.9946
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:316061..317200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101545g2gene9167Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21257.1cds9416Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9446rna9446-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9446 ID=rna9446|Name=rna9446|organism=Nannochloropsis gaditana|type=mRNA|length=634bp
AATATCTCCTTACGAATGCGAGAGGTTTTCATTTCCTGCCTCGACCTCCC
CCCTCTCACTAAGCTCACACCACCCTTTATCTATGATGCACAGGGACCGC
CGCAGGCACCATGGCGGCGTTAGACAAGCTGCAAGAACTTTCGCTTGTCT
CTAAGATATGCACGGAGCTGGACAGTCATTTAGGTCTGGCGGACAAGACT
TTGGCGGAGTTCATCATCCACCTGGCCGAAAGCCATGGGGACGCCAAGTC
CTTTCGTACTGCATTGGACGAAAATGGGGCAGAATTTCCTCCAACATTTT
GTGACAAGCTCTTCAATCTCATTAAAGCGATGAGGCCCCACAGAGTCGGG
AGAAAGAAAACTTACAGCAACGGGGATGGCGGGGAGCATGAGCATGTTGA
ACCTCGCGAAGCCCGGAACGCCAAAGAAGCAGCGTTCCCAGGACTTAGGT
GCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTATCCCTCCCTCAC
TCCCTTCCTCGTCTCTTTCTTCCTCCTCTCTCCCACTCCCCCTTCCTCCC
TCCCCCCCCCCCTCTTGGTGCTCCTCCATTTTCTTTATATCTCTTCCTTC
CTTCACATCCTCACATGGGCCCTTCACTCTCCGT
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protein sequence of rna9446

>rna9446-protein ID=rna9446-protein|Name=rna9446|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MPASLFAGSAPCPVGGPNVPMDGGEGDLRVADEGQSTISEDLTRTTTTVD
ATSLSSSSRSPSVAAGGDSTAVARTSVGAATIGSDLITRTQLDGTFSVVD
TPGRMAEVKPKRWRRTRNQAMETPALASPGLPASSMGEWVRLDKEEEEEE
EGEEEGEEEGEEEEEEDEEEEEEEEEASLPPSLAAGAQFLSTSPLAPFSS
PSSSPPP
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mRNA from alignment at KK037253.1:316061..317200-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9446 ID=rna9446|Name=rna9446|organism=Nannochloropsis gaditana|type=mRNA|length=1140bp|location=Sequence derived from alignment at KK037253.1:316061..317200- (Nannochloropsis gaditana)
TGGCCTCGACATAAGAACATACGCACACATTGATCTTAAACATCGGAAAA
CGGAGAGGTTCTGCATCCCCTCACCAGTCCAGGCACTTTTTTAGAATTGC
GCATGGCGTTGTTGTGCAGCCATTGGGCTAGGTTGGGTGGAAGCTAACTT
TCTGATCAACCTTCTCACAAGCGGATATTTTCCCTACTGTGGTATGTCAG
AACCGTGCTAGGCGTGAAGTTGAACAGACCTGTTCAGGAAGTTGAATTAA
AGCTGCAACGTGCATTTCAGTATAATTGGCGGTTGTTATAGCCAACATTC
ATTCAAAGGCTTGCGCGCTTTTCCTGTTGGGCTCTAATTTGTGTCAAAAG
CTATTTTTACTGCGGTCGTTACCTTCCTAATCAAAGTGCTCCATATCCTC
TATAAAATTAACAGACCACTCGGTGACAGAAATCTTTTCGGGTAGAAAAC
AGTCGTTTTCTACCATCACAACAAGCTTGCTGACGTGCACTGGTCATTTT
GACGTGGCAAAAGAGAGCATGCCGGCATCTCTTTTCGCAGGGTCGGCACC
GTGTCCCGTCGGAGGCCCTAACGTCCCCATGGATGGTGGAGAAGGCGATC
TCCGAGTAGCTGACGAAGGACAAAGCACCATTTCCGAAGATCTGACACGC
ACAACCACTACGGTAGACGCCACGTCGCTTTCCTCTTCCTCTCGCAGCCC
TAGTGTGGCAGCCGGTGGGGATAGCACTGCCGTTGCCAGAACCTCCGTAG
GTGCTGCTACTATTGGCTCCGACTTGATCACACGCACGCAGCTCGACGGG
ACATTCTCCGTTGTCGATACTCCCGGCAGAATGGCAGAGGTGAAGCCAAA
GCGGTGGAGGAGAACAAGGAATCAGGCCATGGAGACCCCTGCCTTGGCCT
CTCCGGGCTTGCCGGCGTCCTCGATGGGGGAATGGGTCCGCTTGGATAAG
GAAGAGGAGGAGGAAGAGGAGGGAGAAGAGGAGGGGGAGGAGGAGGGGGA
GGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGT
CTTTGCCCCCCAGTCTCGCTGCCGGGGCCCAATTCCTGTCTACCTCGCCC
CTCGCCCCTTTCTCTTCCCCTTCCTCCTCCCCTCCCCCCC
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Coding sequence (CDS) from alignment at KK037253.1:316061..317200-

>rna9446 ID=rna9446|Name=rna9446|organism=Nannochloropsis gaditana|type=CDS|length=622bp|location=Sequence derived from alignment at KK037253.1:316061..317200- (Nannochloropsis gaditana)
ATGCCGGCATCTCTTTTCGCAGGGTCGGCACCGTGTCCCGTCGGAGGCCC
TAACGTCCCCATGGATGGTGGAGAAGGCGATCTCCGAGTAGCTGACGAAG
GACAAAGCACCATTTCCGAAGATCTGACACGCACAACCACTACGGTAGAC
GCCACGTCGCTTTCCTCTTCCTCTCGCAGCCCTAGTGTGGCAGCCGGTGG
GGATAGCACTGCCGTTGCCAGAACCTCCGTAGGTGCTGCTACTATTGGCT
CCGACTTGATCACACGCACGCAGCTCGACGGGACATTCTCCGTTGTCGAT
ACTCCCGGCAGAATGGCAGAGGTGAAGCCAAAGCGGTGGAGGAGAACAAG
GAATCAGGCCATGGAGACCCCTGCCTTGGCCTCTCCGGGCTTGCCGGCGT
CCTCGATGGGGGAATGGGTCCGCTTGGATAAGGAAGAGGAGGAGGAAGAG
GAGGGAGAAGAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGA
TGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGTCTTTGCCCCCCAGTCTCG
CTGCCGGGGCCCAATTCCTGTCTACCTCGCCCCTCGCCCCTTTCTCTTCC
CCTTCCTCCTCCCCTCCCCCCC
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Synonyms
Publications