|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100538g4.4544.mrna |
| Orig protein id | gnl|cribi|Naga_100538g4.4544 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:292680..294020 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9440 ID=rna9440|Name=rna9440|organism=Nannochloropsis gaditana|type=mRNA|length=2126bp
CCATTATCTGAGCGTGCATGCCCTGCCCGGGAATCTACTTGGAATCCGAG
AACATTTGTGGACAGAAAACTCAGGACGTTGCCGCGACGTCGGCTCGTAA
GTTCCATCCATCGCGTTCATACCATCCGTTCTACCCAACGATCGTGCGGT
GATACGACCCACAAGACAGACTCCCGCAGCTTCACTATAGCATGGCGAGC
AACTTTACGCCGGACCCGGACGAGGAGGAAGCACATCGTCTGTCTTTAGC
CCGATTGCCTGCTTTTGTTTTGCACGGCAGCAGGGAGAACGTAGATGCCT
CCCGTGCTGCTGCCCTGGTGGAGGAATCCCTCTCCCAGCTTTCGCAAGAC
ATTGCGAACCTCGCCGCGGCAGCCACGGTGGCTGTCTCGCACGAAGACTC
GAGCGGTGGGGAGGGTGCCCGTACGGCAAGTGCCCGTGCGGCAAGGATGA
CATGCAGGCGGGTGCAATTGTCGAACAAATCCCTGTCCGAGGAGGCTGCG
ATAATAGTGGCCAAGGCGTTGTTGCAACTGGGCCAAGACGTGGAGCACGC
CGACATTTCCGACATCATCGCGGGCAAGCACGAAGTGGAGGCGTTGAAAG
TGTTGGAAATAGGTCAGATGCGGGTCGAGGCAGGGAGAAGGCAGTGAGGG
GGAAATCAATAGTGAAGTGGGATTGGGCTTGAAGGAGCGCTTGCTGTTGC
CACGAGACCGACTTCCTCTCTGTTTTCTTCTTAGCGTTCGATCGAGCGTC
TCCTGCTCTCTGAGTCCTCCTCCCCTCAAGCTCTCTTGCCCTTCCTCTTT
CCCTCCCCTCCCCCCTCCCCCCTCCCTCCCTCCCTCCCTCAGTCGCCACC
TCGCTCGCCGCGCAGCCCCTTGGCACCATCAATCTGAGCGACAACGCCCT
GGGCGAGAAAGGGATCAACGCCTGCCGGGCCTTGTTAAGCCAGCAACCCC
GCTTGCACTCCCTCTTTTTGAACAACAACGGATTGTCGGCAGCGGCCACC
CAAGCCATCGTCTCCCACCTCACCTACCGCACCCCTACCTGCCTCCAGGT
GTTGCATTTCCACAACAACATGTCCGGGGATGAAGGTGCGGAGGCTCTGG
CGTCCCTCTTGCCGCATTGCCCCCGCTTGGAAGACCTGCGGTTCAGTGGG
ACCCGCGCAGGGAGGAAGGGGAGTGCCGCATTTGTCCTCGTCCTCTGGGA
GGCTACCCGGAGGCCAGGGGAGAGCAAGACGGAAGAAGGGAAGGAGGGGG
AGCGGATACGGGGCTTGCGGAAGGTAGATTTGGCCGATAATCTGTTCGGG
GGCGGGGACGGGAAGGTGGCGCAACGGCTGGCAGAGGCGTTGGGCGAGCA
ACGGAAACTGGAAAGTTTGAATTTGCGAGATTGCGGACTCGAAGACGAGG
GGGTGCGGGTGCTGTTGCAGATCTTGAGCCGGAAGTGCCGTTACTTGAAA
CGGCTGGACTTGTCGGGGAATGATTTAACGGCAGATGTGGGAGGGGCCTT
GGGGAGGGCGGTGGGGCGGTGGAAAGATCTCACTCACCTGCATCTGGAGG
AGAATGAGCTGGGCAATGCGGGGGCGAAGAAGTTGGGCCGTTATTTGTCC
GGAAGTTTGAAATTGAAACATTTAAAACTGTCGCAGAACGAAGTGAAACG
GTCCGGGGCGGTGGCGGTCGTCCAGGCGTTGGTAGGGCGGGAGGGAGGGG
GGGAGGGTTGGGGAGAGGCGGTGGGAAAAAAGACACGGGTAGAGCTTGAA
AGCAACGAGATAGGGGAGGAAGGGAGGGCGGAATTGATGGAATTGGTGAC
TGCGAAAGGCTATGCGGACATGCTGGGGCCCATGGAGGAGGACGAGGAGG
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGTGAGGAGAGTGAG
GAGGAGGAGGAGGAGAGTGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGA
GGAGGAGGAAGGAGGGGTGGAGGAACTGATCAAGGGGGTGGAGAACGTGG
CGATATGATGCCAGAGTCTGACGTGGGGGGAGGGAGGGAGGAGGGTACAG
AGAAGGCGGGGGACAGGAGGGAAGGAGGGAGGCGGAGGAAGTAGACCAAG
GAAAGGATATTGGAGAAGGGAAGGGA back to topprotein sequence of rna9440 >rna9440-protein ID=rna9440-protein|Name=rna9440|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MEGSWSLSPLSSPHPNLSIQSTCHSSKPPSLHTDIMPTLQRAPYHTRALK
KGAGRKVPRLGHVVNASHRQAQSAHEIHAFIKEKALLLSPLAPVAAVKGE
ADKEGGREWGPLVFMWTVITQTGTRK back to topmRNA from alignment at KK037253.1:292680..294020- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9440 ID=rna9440|Name=rna9440|organism=Nannochloropsis gaditana|type=mRNA|length=1341bp|location=Sequence derived from alignment at KK037253.1:292680..294020- (Nannochloropsis gaditana)
CGTGTAGTTTTTATTCTATCCCGGTGTCGGTGTCCTTTGTGCCTTTCCTT
GATGAGACGTGGGCAGAGATTGGGTGTTAGAAGACATGGGAAAATATCGC
TCGAGAGCATCGGCGAGGCAGAAGGCTTGAGAAAGGTTAAAGGACAGAAA
AGCCGCCACATGTGACACTGCAAGTTGAACAACAAGGACCCTAGCAGTCC
CCTTGCATGTGCCTTTGACATCCCTTGCGGGCCCCGTGTGTGCATGTGCA
CGCCATCAGTGTCATGCGATTGCACAGCCTCTTAACCTCCCATCCCGCTT
TCTTTTCTGCTTCTGTTGCTTCCGCATCTACATCCCTTCTCCCTCTTCCA
CCTTGTCTGGTCAGCTTCCTGGATCCACGGGCCGTATTATTATGACCCCA
CATGCGCGCAGTCTCACGCTTCGATATGAGAGATTGATGCGCGTAATTTC
GCCTTGCTAATGTGTGGAAAAAGTAGCAGGCAATGGAAGGATCTTGGTCC
CTTTCCCCCCTAAGTAGCCCGCACCCTAACCTTTCCATTCAGAGCACTTG
CCACAGCTCAAAACCACCTTCGTTACATACGGACATCATGCCCACATTAC
AGCGTGCCCCCTATCACACGCGTGCGCTGAAAAAAGGTAAGAACACGACG
CTCTTCTTGTTCTTCTTCCCTTCCCTTCTTCGCTTTCCCGATCCCTCACA
GCCGTGCGATGGCCACCTCTTCCACCGATTTCTTCTTCCCTCTTCCTGTC
TCTACCTCCTTCCCCTTTCACATTAATGCAATTCATTAAAGTTTTCTCAC
CCTTCTTGCAGGTGCAGGCCGTAAGGTTCCCCGTCTCGGTCACGTCGTTA
ATGCATCCCACCGCCAGGCGCAATCCGCCCATGAAATCCATGCGTTCATC
AAGGAAAAAGCCTTGTTGCTCTCTCCTCTCGCCCCCGTGGCCGCAGTGAA
GGGTGAAGCCGACAAGGAGGGCGGCAGAGAGTGGGGCCCGCTGGTGTTTA
TGTGGACGGTCATCACGCAGACAGGGACAAGGAAATGAAGGAGTGGGATG
TAAAGCGTGAGGGGGAAGGAAGAAAGATAAGGAAGGGCTGAATAAAATGA
GGGGACGCAAGTGGAGATGTGCGATGTAAAAAGGGCTCAGTAGGGGTGAC
GAGGGAGGAGTGGAAGTTTGTAGACCGAGTGAAGGAGAGGAGGAGGCGGA
AGGAGTGACTCGCAGGGAAAAAAGAAGAAACAAATTTGAAAGACGACCAC
TTCACTCGCCTTTGAAGGCGCTAGAAGACGGGATGTTGCTTATAGAAATT
GATTCACTCGCTGTTACCAACCCAGCAAGCCCCTCCCCTCC back to topCoding sequence (CDS) from alignment at KK037253.1:292680..294020- >rna9440 ID=rna9440|Name=rna9440|organism=Nannochloropsis gaditana|type=CDS|length=762bp|location=Sequence derived from alignment at KK037253.1:292680..294020- (Nannochloropsis gaditana)
GTGCAGGCCGTAAGGTTCCCCGTCTCGGTCACGTCGTTAATGCATCCCAC
CGCCAGGCGCAATCCGCCCATGAAATCCATGCGTTCATCAAGGAAAAAGC
CTTGTTGCTCTCTCCTCTCGCCCCCGTGGCCGCAGTGAAGGGTGAAGCCG
ACAAGGAGGGCGGCAGAGAGTGGGGCCCGCTGGTGTTTATGTGGACGGTC
ATCACGCAGACAGGGACAAGGAAATGAATGGAAGGATCTTGGTCCCTTTC
CCCCCTAAGTAGCCCGCACCCTAACCTTTCCATTCAGAGCACTTGCCACA
GCTCAAAACCACCTTCGTTACATACGGACATCATGCCCACATTACAGCGT
GCCCCCTATCACACGCGTGCGCTGAAAAAAGGTGCAGGCCGTAAGGTTCC
CCGTCTCGGTCACGTCGTTAATGCATCCCACCGCCAGGCGCAATCCGCCC
ATGAAATCCATGCGTTCATCAAGGAAAAAGCCTTGTTGCTCTCTCCTCTC
GCCCCCGTGGCCGCAGTGAAGGGTGAAGCCGACAAGGAGGGCGGCAGAGA
GTGGGGCCCGCTGGTGTTTATGTGGACGGTCATCACGCAGACAGGGACAA
GGAAATGAATGGAAGGATCTTGGTCCCTTTCCCCCCTAAGTAGCCCGCAC
CCTAACCTTTCCATTCAGAGCACTTGCCACAGCTCAAAACCACCTTCGTT
ACATACGGACATCATGCCCACATTACAGCGTGCCCCCTATCACACGCGTG
CGCTGAAAAAAG back to top
|