rna9437, rna9437 (mRNA) Nannochloropsis gaditana

Overview
Namerna9437
Unique Namerna9437
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2136
Alignment locationKK037253.1:287136..288398 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100538g1.4541.mrna
Orig protein idgnl|cribi|Naga_100538g1.4541
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:287136..288398 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100538g1gene9158Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9437rna9437-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21263.1cds9407Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9437 ID=rna9437|Name=rna9437|organism=Nannochloropsis gaditana|type=mRNA|length=2136bp
GGGAGGAGGTTCAAAGGTAGTGATAAGGAGGGAAGGAGAGGATTTGTGCG
TGCTTTTCTTCAAGAAAATATAATCCAGAGGCCCCCTCTCCTTCTCGGAG
CTGGTTCCACGACCTCCCCCCTGCATATTCCGATCTGCACACCAACCTTG
AACCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCAGTTGCACCGGGCCG
ACCCCCGTTCCTTCGTCTCCTCCTACCGGATGCGGCACGGACGTGCCTGC
GAGCGCTGTGGGATCCTGCGACGAGCCACCCACGGGTATTTGGGGGAGGG
CATTTCTCGCTTTTGCGGGGAGTGCGCGGGCTCCACCCGGGGCTGCATCG
ACCTGAACAACTTCAAGTGCAAACTCCAAGATTGCAACCGGATGGCCCGG
TACATCGGGGAGGAAGGGTCGGGGCCCGAAGGCGGGGCGGGGCGCCTGGT
CTTCCGGTGCTGGGCCCACAAGCAACCGGACATGAAAGAGGCCGGCGAGG
GGTGGAAAGAGTTCTACCGCCTCTTCTGCGTCCGGACAGGCGCCACGGGG
GTCATCCCCGTGCCCCCCATCCCGACCTCCCTCCCGACCTCCCTCCCGCC
CTCCCTCCCGGCCTCTCCCACGGCCTTGACCGGGGGCGCCTTTCCTCATC
CTCCTCCCCTCCTGCCCGTCCCACCTGCGGCCTACGCGGGGATGGGGGGG
GATGCGGAGGGAAGGGTGATGAGCGGGGAAGGGGGAAGGTTCGGGGAGGA
GGAGGATGGAGGGGAGGGCGGGGGCCGGGGGGCGGTCTTTGTGCCTCCCG
GTGGATTGCCAGGGCCGCGTGTGGAGAAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGATGGTGATGGAGGAGGAGGAGGAGGGGGAGAG
GGCAGCGGGGAAGGTGGAGGAGAAGGGAGGTGTTGCGCCCTTGCTCGTGC
ACCGCGAGATTTAGGGAGGGAGGGAGGGAGAGGAGAAGGGAGGGAGGGAG
GGAAGGAGGGTAAGCAACCTGTGGGAAGGGAGGTCGGATGAAGGAGGGAA
GAGGGGAGGGAGGGGGAGTGAGGGGGAGGGAGGGAGGGAGGCATGCCCCA
GGAAAAGGTCGGTGGGAGGTTGGGAGGGAAGGAGGAAGGGACGCGGGGGG
AGGAGATGCTGGATAAAGGAGCCATTAACGTGGTTCATGCACCCTGGGAG
CTCGGGCGAAAGGGGGGGGGGGAGGCGGGAAATGCGGCGGCAGGACCTAA
GGTCGTGAAAGGAGGGAGCGGGGCGAGGAAGGGGGTACGAGGAGGCAAGG
AGGGTGGGAGAAGGACCAGAAACGAATGATGGGGAGGGAGGAAAACCCGC
AGCCTGGGGGAGAAGGGGTGGGGCGGGGAGGCAAGGCTAGGACGAGCAGA
GACGGCGTCGGGGACCGGAAGGCTTTCCTCCCTCGGACCGGGCCCCCCGT
GGGAGGTGACGAGCCGTTACAAACCGTTGCATGAAAAACGGGTCGTAACG
GGCGGATGGAGTGAGGATTGGGTGGAAGAAGGAGGGTTGGGACCCCGCGG
AAGACACTAGTAACGGCATCCCAGGGCAGCTTTTGCTGTTGCTTTCTAGA
AGGTTCGATGAAGCAGATAGCGGCGACCTGGATACATCCGGGTAGTATGC
TCCCAGTCGCGGGGGACTCACGGGCGAGATGAAGTTGTGAAGGTGCCCCT
CCGTTGACAAGCAGGAGGGATGGAAGCGAGGAGTAAGGAGGGGAGGTGAC
GGGAAGGAAAGCGAATGAGAAAACGTATAAGATCCCAAAAAAGAAGACCA
GGAATGATAAGATGACCCGAGAAGAAAAGGCAAATTGGAAGGAAAACGAG
GCAGGACACTCGCGTGCAAGCAAGGGGAGCATGGGAGAGGAATGGACGAG
GGCCCAACCCCGCTCTGCTTGTTGCGCTCTGGCACGGTCGATACGGAAAC
GACGGCTGTGTCGGTGGATAAGCTCACAAGAGAGAAAGGGCCCAAGAAGA
GTGTGCCGTCTACATCTAGGCAGGGCGGCTTAACCGTGCGTGGCTTGGAT
CGCGCGAGTGGGAGGGGCTTTGAGAGGGCCAGCATGGCCGTAGGCAAGGA
AAGGTTCAAAAGAAGCGTCAATGCTGCCCGGTCCTG
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protein sequence of rna9437

>rna9437-protein ID=rna9437-protein|Name=rna9437|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MWDLSNRIGEVWCTGSADPVNLHHPQDRFKRRVVASHIMPAAAINGHGPS
AGAGGGDMDPELAHAEETLLMMKKAPAGTSASSVGRRSGFHIPPMTPTGA
TFHGRRGGVGRSGGKGSPSICANGARRRVCSEA
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mRNA from alignment at KK037253.1:287136..288398-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9437 ID=rna9437|Name=rna9437|organism=Nannochloropsis gaditana|type=mRNA|length=1263bp|location=Sequence derived from alignment at KK037253.1:287136..288398- (Nannochloropsis gaditana)
ATGTGGGATCTGAGTGTGTTCCATGCACGGCGTGGCTGGTGTTGTCATGG
ACGGCGTGGGTTGATGTGTGTTGCAGAATCTTGAGAGAAGAAGAGCTAGG
ACCATGAAGGGCATTCCCTCCTGCAAGATACCTTCGACTTCCTTTTTCAT
TGCTTCCCTACTCACGCTTCTCCTTTCTTATGTGCACAATTTCGTTCCCA
AATCAAATTAGAACCGCATTGGAGAGGTTTGGTGCACGGGGAGCGCCGAT
CCTGTCAATTTGCATCATCCACAAGACCGCTTTAAAAGAAGAGTCGTCGC
GTCGCATATCATGCCCGCTGCCGCTATCAATGGCCATGGGCCCAGTGCCG
GTGCCGGCGGCGGAGACATGGTACGTCTTCATGCATGACATACACCTATG
TAACACTCGTTTACGCTTGCGTGTTCCCGCCATTTGTGTTTTCGGGCGCC
GGAAAGAGCATGGCTCATGGCATGCCAGGCGACGAAAAAATCTTTTCCCC
CCCTCAACCTTCCGTCCCCGGGATCCATTGCCCTTGGCCCCGTACAACCC
CTGTTGTACCTTCCCATGACCCGTTCGTCGACTTAAGGAGAAATTGCACC
CCATGATCATGATATTTGATGTTTGCCATTAATTTCCCTTTTTTCGCCGC
ACTGATGCTGTGTCCCGATCCCCCCCGTCGGCACCTCCTTCATAATTCTT
TTTTCATCATCTCGTGCCCTCCGACCTGTCTCATCCTCCTTGTTGTCGAT
TCCACCATCACTATTTTTACTATCTCCCCTCCACCCCAATTATCCTTTCT
CACCTTTCCCCCCCTCCTACCTTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTTCCACCCCAGGACCCCGAGCTCGCCCATGCGGAAGAAACGC
TGCTCATGATGAAAAAAGCCCCTGCTGGGACGTCGGCCAGCTCCGTGGGC
CGCCGGAGTGGTTTCCACATCCCTCCCATGACCCCCACGGGTGCTACCTT
CCATGGCCGTCGCGGGGGAGTGGGCCGGAGCGGAGGGAAGGGCAGCCCCT
CGGTGAACAGGGCGGGACGAAAGCCCCGAGCAGCATCCGCGGGCGTGGCT
GGCGCCACCGCGGCCCTGGTGGCGGCGAATGCGTCGGGCGGGGAGGGAGG
GGAAGGGCGAGGGCGGGGGGGAGGGAATGGGGGAGGGGGGAAACGCCGGA
GGAATTCTGCGCCCTCAGATTTGTGCCAACGGTGCTCGGCGGAGGGTTTG
CAGCGAGGCATAA
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Coding sequence (CDS) from alignment at KK037253.1:287136..288398-

>rna9437 ID=rna9437|Name=rna9437|organism=Nannochloropsis gaditana|type=CDS|length=1608bp|location=Sequence derived from alignment at KK037253.1:287136..288398- (Nannochloropsis gaditana)
ATTTGTGCCAACGGTGCTCGGCGGAGGGTTTGCAGCGAGGCATAAGACCC
CGAGCTCGCCCATGCGGAAGAAACGCTGCTCATGATGAAAAAAGCCCCTG
CTGGGACGTCGGCCAGCTCCGTGGGCCGCCGGAGTGGTTTCCACATCCCT
CCCATGACCCCCACGGGTGCTACCTTCCATGGCCGTCGCGGGGGAGTGGG
CCGGAGCGGAGGGAAGGGCAGCCCCTCGAACCGCATTGGAGAGGTTTGGT
GCACGGGGAGCGCCGATCCTGTCAATTTGCATCATCCACAAGACCGCTTT
AAAAGAAGAGTCGTCGCGTCGCATATCATGCCCGCTGCCGCTATCAATGG
CCATGGGCCCAGTGCCGGTGCCGGCGGCGGAGACATGATGTGGGATCTGA
GTATTTGTGCCAACGGTGCTCGGCGGAGGGTTTGCAGCGAGGCATAAGAC
CCCGAGCTCGCCCATGCGGAAGAAACGCTGCTCATGATGAAAAAAGCCCC
TGCTGGGACGTCGGCCAGCTCCGTGGGCCGCCGGAGTGGTTTCCACATCC
CTCCCATGACCCCCACGGGTGCTACCTTCCATGGCCGTCGCGGGGGAGTG
GGCCGGAGCGGAGGGAAGGGCAGCCCCTCGAACCGCATTGGAGAGGTTTG
GTGCACGGGGAGCGCCGATCCTGTCAATTTGCATCATCCACAAGACCGCT
TTAAAAGAAGAGTCGTCGCGTCGCATATCATGCCCGCTGCCGCTATCAAT
GGCCATGGGCCCAGTGCCGGTGCCGGCGGCGGAGACATGATGTGGGATCT
GAGTATTTGTGCCAACGGTGCTCGGCGGAGGGTTTGCAGCGAGGCATAAG
ACCCCGAGCTCGCCCATGCGGAAGAAACGCTGCTCATGATGAAAAAAGCC
CCTGCTGGGACGTCGGCCAGCTCCGTGGGCCGCCGGAGTGGTTTCCACAT
CCCTCCCATGACCCCCACGGGTGCTACCTTCCATGGCCGTCGCGGGGGAG
TGGGCCGGAGCGGAGGGAAGGGCAGCCCCTCGAACCGCATTGGAGAGGTT
TGGTGCACGGGGAGCGCCGATCCTGTCAATTTGCATCATCCACAAGACCG
CTTTAAAAGAAGAGTCGTCGCGTCGCATATCATGCCCGCTGCCGCTATCA
ATGGCCATGGGCCCAGTGCCGGTGCCGGCGGCGGAGACATGATGTGGGAT
CTGAGTATTTGTGCCAACGGTGCTCGGCGGAGGGTTTGCAGCGAGGCATA
AGACCCCGAGCTCGCCCATGCGGAAGAAACGCTGCTCATGATGAAAAAAG
CCCCTGCTGGGACGTCGGCCAGCTCCGTGGGCCGCCGGAGTGGTTTCCAC
ATCCCTCCCATGACCCCCACGGGTGCTACCTTCCATGGCCGTCGCGGGGG
AGTGGGCCGGAGCGGAGGGAAGGGCAGCCCCTCGAACCGCATTGGAGAGG
TTTGGTGCACGGGGAGCGCCGATCCTGTCAATTTGCATCATCCACAAGAC
CGCTTTAAAAGAAGAGTCGTCGCGTCGCATATCATGCCCGCTGCCGCTAT
CAATGGCCATGGGCCCAGTGCCGGTGCCGGCGGCGGAGACATGATGTGGG
ATCTGAGT
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Synonyms
Publications