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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100331g7.6025.mrna |
| Orig protein id | gnl|cribi|Naga_100331g7.6025 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:255589..258460 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9427 ID=rna9427|Name=rna9427|organism=Nannochloropsis gaditana|type=mRNA|length=1872bp
CGCTGTTGCAAACTTGTAACCAATGCAGGCATCCCCCGGCGCGCTATGGC
ATGCAATTGATGCATACCGTATGAGCAGGAGATAATGGAAAGGGACAGAG
GAAGGAAGGAAGAGAAAGGGAGGGGAGCGCTGGGACTCACCGACTGTCAG
CATCCCGCGCTGTTGTGCTTGGACACGTACTGCACTGGTAGCAACCTTCA
AAATTTGACGGAGGGCCATGGCTCCTAGCTATCAACGTATCTATGATATA
TTCGCATGCGGGAAGGGGTGATTTACTGAGTAAAGGGAAGGAAAAGAGAC
CAACGGGGGGCATTCCAGGAGCCAATGCTCCTCGTATCCTGATGAAGAAT
AAAGGGACACAATGCTGAACCGCCCCGCCGTGACCCCGACGCTCAAGCCT
TCCAAATCAGCCGATAAATCGCTTGTGAAGCATCCGTCTCTCCAACAACC
TCCATACGCAGGCCTTGCCCCCACCCCTCGTCGGCATCAGGCTTGAGTCG
TGGGGAAATGTGACGAGGGTGATACTGCGGCGCGGGCGAGATCCCTCTAC
TCTTAGGAGAAGAAATGGAAACGGACGCCACCAACACATTCGCAAGTCAG
GACAACTCGCTGTGGACAGGCCTTCACCTTGTCCACGTGATGCGTGGAAG
ATGTGTGGCACGTAGAGGGGAATACCAGGTTTGAGGCCTGTGGTCGCACA
GTTTCAAAGAGACTCTTACAGCTCGTGGGTTCGACGGAGCGCTGAGCGAG
TACATTGCGCATTTCTCTCTCCCTCTTTCACTTCTTCTTGAGGCCTTGGC
CGCGCTCAACACACGGCAGTCAAGCGCGCTTGTACACGTGGCAATGACCG
CGCGGAGGTGGCATCGGGCTTTTACTTGTCTCGGTCGTTTGATTGCTTGT
CAGGCATAGGACCGTTTGCTTGTTGTTCTCTTCCCCGCTTCTTGAAGCTA
CCCACAGAGACTCCGCCCTTCCTCAAATTTCCTGCGTACATCCATGCATG
CACAGCCAAATACACACGCCATTGTGAATTTTTGGACATCATGGCCCTCC
GTCGTCTGATTTCTTCTTCCTCCGCGTCCATGCGGCCCACGCTGGCCGCC
GCGGTGAACGTGCGCTCTGCCCCCGCTATGAGGATGTCTGGGAAGTCATC
TTTTGACGATAAGGAGCACGCCATGGAGGATATGTACATCAGGCAAGCGG
AGGAAAAGATTTTGAAAAAGCTGCTCAAAAAGCTGAAGGAGGACGAAAAG
CCAGCCTGTGACACAACGGCCAAGAAAGAACTCGAGAAGATCATGGGCTC
GGTCCCGGAAGATCTGGCCAAGAAGCTCATGGACTGGAAGAAGAGCAAGC
ACTGAGGCCTTGACGAGGGACGGGCATATGTCCCTGGGAGGCATGCACCT
GCCGGCCGTATAGGCATCCTCAGGGGGGGGGGCTGCCAGTGGGCGCTTGG
TGGGATGGTAGGTGTCTGAAGTAGCGGGTGGGAAAGCTCAGGAGGGTCAG
GACTGGAAGTAGGGGAGCGGCCGGGGGAAATGCAGGTGGGCGGGCGGAGG
GAGCCGGTGGGGACAAGGGCGGTGTGAAAAAGAAGGGAAGAGGGAGATGC
CTGTAGAGTCCTCCGTGTCGTGTGGTCGCAAGGAAGGGGTTTGGAGATCA
CGACGACACCCTACCTCCGAGGCGCGGGTGGTGCACATGGTAGGAGTGTA
CCGGAGGGGATCGCGGGGAGGGGGGGGGCAAATGTGGAGATGAAAAGGCA
TGGGAGGCAGGAAGGGAGGGAGGGAAGGGATGAAATTGGAACATCAGGAT
GGAAAAGGTTCAAAAACGGAGTGCGATGAAAGCGTATTGGCGAAGAATCG
AACACAGGAGACTCAAACGAGG back to topprotein sequence of rna9427 >rna9427-protein ID=rna9427-protein|Name=rna9427|organism=Nannochloropsis gaditana|type=polypeptide|length=237bp
MPPVGLFSFPLLSKSPLPACEYIIDTLIARSHGPPSNFEGCYQCSTCPST
TARDADSRAPGDACIGYKFATAASLVVPACLQWIERAELQCADVLGREGG
DRAGPLCREELREGGAWEGDAGGSIQGRPFLGFFGRGGGGDGDRRRIRPG
NSGQRGRQDRVDCGGSEIHRIASTGEVKHLLKRWYAPVGEGGLRGCERGK
RKRNGGESDGVGVWGDVNLRACPSARNMRLEGKAPSF back to topmRNA from alignment at KK037253.1:255589..258460+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9427 ID=rna9427|Name=rna9427|organism=Nannochloropsis gaditana|type=mRNA|length=2872bp|location=Sequence derived from alignment at KK037253.1:255589..258460+ (Nannochloropsis gaditana)
TCTCTTTGAAACTGTGCGACCACAGGCCTCAAACCTGGTATTCCCCTCTA
CGTGCCACACATCTTCCACGCATCACGTGGACAAGGTGAAGGCCTGTCCA
CAGCGAGTTGTCCTGACTTGCGAATGTGTTGGTGGCGTCCGTTTCCATTT
CTTCTCCTAAGAGTAGAGGGATCTCGCCCGCGCCGCAGTATCACCCTCGT
CACATTTCCCCACGACTCAAGCCTGATGCCGACGAGGGGTGGGGGCAAGG
CCTGCGTATGGAGGTTGTTGGAGAGACGGATGCTTCACAAGCGATTTATC
GGCTGATTTGGAAGGCTTGAGCGTCGGGGTCACGGCGGGGCGGTTCAGCA
TTGTGTCCCTTTATTCTTCATCAGGATACGAGGAGCATTGGCTCCTGGAA
TGCCCCCCGTtggtctcttttccttccctttacTCAGTAAATCACCCCTT
CCCGCATGCGAATATATCATAGATACGTTGATAGCTAGGAGCCATGGCCC
TCCGTCAAATTTTGAAGGTTGCTACCAGTGCAGTACGTGTCCAAGCACAA
CAGCGCGGGATGCTGACAGTCGGTGAGTCCCagcgctcccctccctttct
cttccttccttcctctgtccctttCCATTATCTCCTGCTCATACGGTATG
CATCAATTGCATGCCATAGCGCGCCGGGGGATGCCTGCATTGGTTACAAG
TTTGCAACAGCGGCAAGCCTTGTTGTCCCAGCCTGTTTGCAATGGATTGA
GCGGGCGGAGCTTCAGTGCGCAGGTATGTCAAGAGAGGCGATGCTTGCCA
AAAGGCACTGGGTGAAGCGTATGAAGGGGGAATGAGTGGGGTCCGCCAAG
TGCATGGGattgaggaaggggggatggcgggggagaggagggaggggagg
cgggatgTGCTGATAACTGATTAACCCCCACCACACACCTGACGGTGATG
CTGACACGCCCACAGACGTTcttggacgagaaggaggtgacAGAGCGGGT
CCTCTCTGTCGTGAAGAACTTCGAGAAGGTCGGGCAGGAgcatgggggga
agggggaaggagggaggggtgacgaggaaggaggggggaagaaaggaaag
ggggaggggttcgTGCACGTGGGGCTCCGACCCCACGCCGTCCTTCCATG
CCATGCACTCTCGTCTTGTAACCTGTTTGTGCGCGCTTTGAGTCTATTTC
CACGCGGAAAGAGGTGTGCTCGGCACCGACGTCTTGCTCATGCAGATTCT
TCCcggtgccctcctcccgacaCGTCCCCCTCAGGTGGAGCCTGGGAAGG
TGACGCCGGCGGCTCGATTCAAGGAAGACCTTTCCTTGGATTCtttggac
gtggtggaggtgcgtggggcgcgaggagggagggcgggagggagggaggg
cgggaaggacgtAGGGAGAGGCCTGCGTCGACACGTCCGACCACTTGTCG
ATGCGTCTCTTCCTTGTGTGAAGAGGTATGGGCCGCCTGACTGGATCGAT
CTTCGTGCTTACGCTTTCCTaccgtcctcccctgtcACTTTAATGGTagg
tggtgatggcgatCGAAGAAGAATTCGCCCTGGAAATTCCGGACAACGAG
GCCGACAAGATCGGGTCGATTGCGGAGGCAGTGAAATACATCGCATCGCA
TCCACAGGTACGTCGAtggggtgggggaaaaggactgCGGATAAGTCACG
CGCCGACTCGCTATTTgtgggccccgccccccatcTTCCTTGTAATGGTa
ttgggaggagaaggggagcaagaagaaagacatgAATATAGGACAAAGCA
ATAGGAAGGCAGAGGGTAACGTGGCTTGAAGAACTCATTTGCACCTGTGC
TCATCCCGGTAAATTGGTGTACCTCCTCGGATCAGGCGAAGTAAAGCATC
TTCTTAAGCGCTGGTATGCCCCTGTCGGCGAGGGTGGGCTCAGAGGATGC
GAgcgcgggaaaaggaaaagaaatggcGGAGAAAGTGATGGGGTTGGAGT
ATGGGGCGATGTGAACCTGAGGGCGTGTCCATCGGCCAGGAATATGCGGC
TTGAAGGGAAGGCTCCTAGTTTCTAAGTTTCCATTTATATCGGTTGGACT
TGTCCGCGGTAGAGAGTGGCGACTCAGTGCGGCatgaaggcgggggggaa
aggttcAGATGACTAGGCGTTGGAGTCTTTGGCTTTTCGACGGACGACGA
TTGCTGGGGATCTCAAGAGGCCGCGAGGGGGCAAGATGAGTAGAATAAGG
GATTATTGCAGGTAGATGGCAGGGcagaggaaaatggaggaaacaagaaa
cagagagagggacgagtTGGTGGGAGCGTTGAGACAGGGTTATATGTATG
TCCAggcccccccaaaaaagatgCAACGCAAGTTCGGAGACAACAACTGA
CCACAATGTTTATCAAtgttgggggggaaatggaagaccGTTGGATAAAG
TTGGAATGGATcctgtctttttcttttggGTTAAATGTAGGgtatggggg
ggaggaggttgatacAGACTCCTGATGCTTCTTGAAACAAACTCTATGCA
TAATCACGTCTATGAACCATAACACGACCCTGTCACGGCCTAAGCGGTAT
CTCTGCCATGCCCTTTGTCATTCCGTGGGAAAAACTCATCGTACATGGGA
AAGATCGTCGTCTCTGTCACGCAGAGTAGTGCTTGAGGACTCCCTCGCTT
GAAGGCGAAGGCCTAACGCAACACTTGCTACGGCCGCGACATTTTGGCAC
TTATCCCATGTTCATACAATCATGGACGACTTTTCCGACCGTTTTTATTC
AGAAAGAAAAACTGTGATTGTTCACAGGAGTGGGCGTGCACTGATAGGAA
AGAATGTCGAGAGTACTTGTGC back to topCoding sequence (CDS) from alignment at KK037253.1:255589..258460+ >rna9427 ID=rna9427|Name=rna9427|organism=Nannochloropsis gaditana|type=CDS|length=4284bp|location=Sequence derived from alignment at KK037253.1:255589..258460+ (Nannochloropsis gaditana)
ATGCCCCCCGTtggtctcttttccttccctttacTCAGTAAATCACCCCT
TCCCGCATGCGAATATATCATAGATACGTTGATAGCTAGGAGCCATGGCC
CTCCGTCAAATTTTGAAGGTTGCTACCAGTGCAGTACGTGTCCAAGCACA
ACAGCGCGGGATGCTGACAGTCGCGCGCCGGGGGATGCCTGCATTGGTTA
CAAGTTTGCAACAGCGGCAAGCCTTGTTGTCCCAGCCTGTTTGCAATGGA
TTGAGCGGGCGGAGCTTCAGTGCGCAGACGTTcttggacgagaaggaggt
gacAGAGCGGGTCCTCTCTGTCGTGAAGAACTTCGAGAAGGTGGAGCCTG
GGAAGGTGACGCCGGCGGCTCGATTCAAGGAAGACCTTTCCTTGGATTCt
ttggacgtggtggaggtggtgatggcgatCGAAGAAGAATTCGCCCTGGA
AATTCCGGACAACGAGGCCGACAAGATCGGGTCGATTGCGGAGGCAGTGA
AATACATCGCATCGCATCCACAGGCGAAGTAAAGCATCTTCTTAAGCGCT
GGTATGCCCCTGTCGGCGAGGGTGGGCTCAGAGGATGCGAgcgcgggaaa
aggaaaagaaatggcGGAGAAAGTGATGGGGTTGGAGTATGGGGCGATGT
GAACCTGAGGGCGTGTCCATCGGCCAGGAATATGCGGCTTGAAGGGAAGG
CTCCTAGTTTCTAAATGCCCCCCGTtggtctcttttccttccctttacTC
AGTAAATCACCCCTTCCCGCATGCGAATATATCATAGATACGTTGATAGC
TAGGAGCCATGGCCCTCCGTCAAATTTTGAAGGTTGCTACCAGTGCAGTA
CGTGTCCAAGCACAACAGCGCGGGATGCTGACAGTCGCGCGCCGGGGGAT
GCCTGCATTGGTTACAAGTTTGCAACAGCGGCAAGCCTTGTTGTCCCAGC
CTGTTTGCAATGGATTGAGCGGGCGGAGCTTCAGTGCGCAGACGTTcttg
gacgagaaggaggtgacAGAGCGGGTCCTCTCTGTCGTGAAGAACTTCGA
GAAGGTGGAGCCTGGGAAGGTGACGCCGGCGGCTCGATTCAAGGAAGACC
TTTCCTTGGATTCtttggacgtggtggaggtggtgatggcgatCGAAGAA
GAATTCGCCCTGGAAATTCCGGACAACGAGGCCGACAAGATCGGGTCGAT
TGCGGAGGCAGTGAAATACATCGCATCGCATCCACAGGCGAAGTAAAGCA
TCTTCTTAAGCGCTGGTATGCCCCTGTCGGCGAGGGTGGGCTCAGAGGAT
GCGAgcgcgggaaaaggaaaagaaatggcGGAGAAAGTGATGGGGTTGGA
GTATGGGGCGATGTGAACCTGAGGGCGTGTCCATCGGCCAGGAATATGCG
GCTTGAAGGGAAGGCTCCTAGTTTCTAAATGCCCCCCGTtggtctctttt
ccttccctttacTCAGTAAATCACCCCTTCCCGCATGCGAATATATCATA
GATACGTTGATAGCTAGGAGCCATGGCCCTCCGTCAAATTTTGAAGGTTG
CTACCAGTGCAGTACGTGTCCAAGCACAACAGCGCGGGATGCTGACAGTC
GCGCGCCGGGGGATGCCTGCATTGGTTACAAGTTTGCAACAGCGGCAAGC
CTTGTTGTCCCAGCCTGTTTGCAATGGATTGAGCGGGCGGAGCTTCAGTG
CGCAGACGTTcttggacgagaaggaggtgacAGAGCGGGTCCTCTCTGTC
GTGAAGAACTTCGAGAAGGTGGAGCCTGGGAAGGTGACGCCGGCGGCTCG
ATTCAAGGAAGACCTTTCCTTGGATTCtttggacgtggtggaggtggtga
tggcgatCGAAGAAGAATTCGCCCTGGAAATTCCGGACAACGAGGCCGAC
AAGATCGGGTCGATTGCGGAGGCAGTGAAATACATCGCATCGCATCCACA
GGCGAAGTAAAGCATCTTCTTAAGCGCTGGTATGCCCCTGTCGGCGAGGG
TGGGCTCAGAGGATGCGAgcgcgggaaaaggaaaagaaatggcGGAGAAA
GTGATGGGGTTGGAGTATGGGGCGATGTGAACCTGAGGGCGTGTCCATCG
GCCAGGAATATGCGGCTTGAAGGGAAGGCTCCTAGTTTCTAAATGCCCCC
CGTtggtctcttttccttccctttacTCAGTAAATCACCCCTTCCCGCAT
GCGAATATATCATAGATACGTTGATAGCTAGGAGCCATGGCCCTCCGTCA
AATTTTGAAGGTTGCTACCAGTGCAGTACGTGTCCAAGCACAACAGCGCG
GGATGCTGACAGTCGCGCGCCGGGGGATGCCTGCATTGGTTACAAGTTTG
CAACAGCGGCAAGCCTTGTTGTCCCAGCCTGTTTGCAATGGATTGAGCGG
GCGGAGCTTCAGTGCGCAGACGTTcttggacgagaaggaggtgacAGAGC
GGGTCCTCTCTGTCGTGAAGAACTTCGAGAAGGTGGAGCCTGGGAAGGTG
ACGCCGGCGGCTCGATTCAAGGAAGACCTTTCCTTGGATTCtttggacgt
ggtggaggtggtgatggcgatCGAAGAAGAATTCGCCCTGGAAATTCCGG
ACAACGAGGCCGACAAGATCGGGTCGATTGCGGAGGCAGTGAAATACATC
GCATCGCATCCACAGGCGAAGTAAAGCATCTTCTTAAGCGCTGGTATGCC
CCTGTCGGCGAGGGTGGGCTCAGAGGATGCGAgcgcgggaaaaggaaaag
aaatggcGGAGAAAGTGATGGGGTTGGAGTATGGGGCGATGTGAACCTGA
GGGCGTGTCCATCGGCCAGGAATATGCGGCTTGAAGGGAAGGCTCCTAGT
TTCTAAATGCCCCCCGTtggtctcttttccttccctttacTCAGTAAATC
ACCCCTTCCCGCATGCGAATATATCATAGATACGTTGATAGCTAGGAGCC
ATGGCCCTCCGTCAAATTTTGAAGGTTGCTACCAGTGCAGTACGTGTCCA
AGCACAACAGCGCGGGATGCTGACAGTCGCGCGCCGGGGGATGCCTGCAT
TGGTTACAAGTTTGCAACAGCGGCAAGCCTTGTTGTCCCAGCCTGTTTGC
AATGGATTGAGCGGGCGGAGCTTCAGTGCGCAGACGTTcttggacgagaa
ggaggtgacAGAGCGGGTCCTCTCTGTCGTGAAGAACTTCGAGAAGGTGG
AGCCTGGGAAGGTGACGCCGGCGGCTCGATTCAAGGAAGACCTTTCCTTG
GATTCtttggacgtggtggaggtggtgatggcgatCGAAGAAGAATTCGC
CCTGGAAATTCCGGACAACGAGGCCGACAAGATCGGGTCGATTGCGGAGG
CAGTGAAATACATCGCATCGCATCCACAGGCGAAGTAAAGCATCTTCTTA
AGCGCTGGTATGCCCCTGTCGGCGAGGGTGGGCTCAGAGGATGCGAgcgc
gggaaaaggaaaagaaatggcGGAGAAAGTGATGGGGTTGGAGTATGGGG
CGATGTGAACCTGAGGGCGTGTCCATCGGCCAGGAATATGCGGCTTGAAG
GGAAGGCTCCTAGTTTCTAAATGCCCCCCGTtggtctcttttccttccct
ttacTCAGTAAATCACCCCTTCCCGCATGCGAATATATCATAGATACGTT
GATAGCTAGGAGCCATGGCCCTCCGTCAAATTTTGAAGGTTGCTACCAGT
GCAGTACGTGTCCAAGCACAACAGCGCGGGATGCTGACAGTCGCGCGCCG
GGGGATGCCTGCATTGGTTACAAGTTTGCAACAGCGGCAAGCCTTGTTGT
CCCAGCCTGTTTGCAATGGATTGAGCGGGCGGAGCTTCAGTGCGCAGACG
TTcttggacgagaaggaggtgacAGAGCGGGTCCTCTCTGTCGTGAAGAA
CTTCGAGAAGGTGGAGCCTGGGAAGGTGACGCCGGCGGCTCGATTCAAGG
AAGACCTTTCCTTGGATTCtttggacgtggtggaggtggtgatggcgatC
GAAGAAGAATTCGCCCTGGAAATTCCGGACAACGAGGCCGACAAGATCGG
GTCGATTGCGGAGGCAGTGAAATACATCGCATCGCATCCACAGGCGAAGT
AAAGCATCTTCTTAAGCGCTGGTATGCCCCTGTCGGCGAGGGTGGGCTCA
GAGGATGCGAgcgcgggaaaaggaaaagaaatggcGGAGAAAGTGATGGG
GTTGGAGTATGGGGCGATGTGAACCTGAGGGCGTGTCCATCGGCCAGGAA
TATGCGGCTTGAAGGGAAGGCTCCTAGTTTCTAA back to top
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