rna9426, rna9426 (mRNA) Nannochloropsis gaditana

Overview
Namerna9426
Unique Namerna9426
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length459
Alignment locationKK037253.1:253780..256300 -

Link to JBrowse

Properties
Property NameValue
ProductATPase inhibitor, IATP, mitochondria
Orig transcript idgnl|cribi|Naga_100331g8.6026.mrna
Orig protein idgnl|cribi|Naga_100331g8.6026
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:253780..256300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100331g8gene9147Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9426rna9426-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21275.1cds9396Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9426 ID=rna9426|Name=rna9426|organism=Nannochloropsis gaditana|type=mRNA|length=459bp
ATGAAGCCCTCCCACCGGGTGTCCCTGGACGGTGTTGGCCCCGTGGCGTC
AGCCGACAGGACTTCGTGTTCTATCAATTGCACCCGCTTGCCCTTGCTCC
GTCATTGGGTCGATTTTTACATTCTGACACACAAAAAAAAGTCACTTATG
CTTTTGCAAGACATTTACCCGCAAGTCAGTCTGGTAGAAAGAATGACTTC
CAGAGGCCGCTGCTCGGAGCAATTACAGCACCAACATTGGAAAAGTGCAC
GCTTAGAATATAAAAGAAAGTATTTACAGGAAAAAATACCAGCACCAAAC
TTGGAGAAATACACAAAAACTAAGTTCTGGTACCTACAGGGAATTCTTGT
TATAGTAGGTAGAGAGCAATTTCAGCAGAATCCGAACAGCGAACAAGGAG
CAGGTCTTGAGTACACCTTTTTGCTACTCGTAATTACTACTACTAGTGGC
TACAAATGA
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protein sequence of rna9426

>rna9426-protein ID=rna9426-protein|Name=rna9426|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MALRRLISSSSASMRPTLAAAVNVRSAPAMRMSGKSSFDDKEHAMEDMYI
RQAEEKILKKLLKKLKEDEKPACDTTAKKELEKIMGSVPEDLAKKLMDWK
KSKH
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mRNA from alignment at KK037253.1:253780..256300-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9426 ID=rna9426|Name=rna9426|organism=Nannochloropsis gaditana|type=mRNA|length=2521bp|location=Sequence derived from alignment at KK037253.1:253780..256300- (Nannochloropsis gaditana)
CGCTGTTGCAAACTTGTAACCAATGCAGGCATCCCCCGGCGCGCTATGGC ATGCAATTGATGCATACCGTATGAGCAGGAGATAATGGAAAGGGACAGAG GAAGGAAGGAAGAGAAAGGGAGGGGAGCGCTGGGACTCACCGACTGTCAG CATCCCGCGCTGTTGTGCTTGGACACGTACTGCACTGGTAGCAACCTTCA AAATTTGACGGAGGGCCATGGCTCCTAGCTATCAACGTATCTATGATATA TTCGCATGCGGGAAGGGGTGATTTACTGAGTAAAGGGAAGGAAAAGAGAC CAACGGGGGGCATTCCAGGAGCCAATGCTCCTCGTATCCTGATGAAGAAT AAAGGGACACAATGCTGAACCGCCCCGCCGTGACCCCGACGCTCAAGCCT TCCAAATCAGCCGATAAATCGCTTGTGAAGCATCCGTCTCTCCAACAACC TCCATACGCAGGCCTTGCCCCCACCCCTCGTCGGCATCAGGCTTGAGTCG TGGGGAAATGTGACGAGGGTGATACTGCGGCGCGGGCGAGATCCCTCTAC TCTTAGGAGAAGAAATGGAAACGGACGCCACCAACACATTCGCAAGTCAG GACAACTCGCTGTGGACAGGCCTTCACCTTGTCCACGTGATGCGTGGAAG ATGTGTGGCACGTAGAGGGGAATACCAGGTTTGAGGCCTGTGGTCGCACA GTTTCAAAGAGACTCTTACAGCTCGTGGGTTCGACGGAGCGCTGAGCGAG TACATTGCGCATTTCTCTCTCCCTCTTTCACTTCTTCTTGAGGCCTTGGC CGCGCTCAACACACGGCAGTCAAGCGCGCTTGTACACGTGGCAATGACCG CGCGGAGGTGGCATCGGGCTTTTACTTGTCTCGGTCGTTTGATTGCTTGT CAGGCATAGGACCGTTTGCTTGTTGTTCTCTTCCCCGCTTCTTGAAGCTA CCCACAGAGACTCCGCCCTTCCTCAAATTTCCTGCGTACATCCATGCATG CACAGCCAAATACACACGCCATTGTGAATTTTTGGACATCATGGCCCTCC GTCGTCTGATTTCTTCTTCCTCCGCGTCCATGCGGCCCACGCTGGCCGCC GCGGTGAACGTGCGCTCTGCCCCCGCTATGAGGATGTCTGGGAAGTCATC TTTTGACGATAAGGAGCACGCCATGGAGGATATGTACATCAGGGTACGTG GAGAAAGTGGCGATTCGAGGTGGAGAAGGGGTTTGGAAATCGGTCGATCT CTCAAAGGAAAGTACAAGATTGGAAGAAGAAGGGAGGGACGGGAAAAAGG GCCGCGGTCGCTTCGAATCTTTCCTTGATTTTCTCTCTTTTTGCCATCCT CGTCGAATACAGCAAGCGGAGGAAAAGATTTTGAAAAAGCTGCTCAAAAA GCTGAAGGAGGACGAAAAGCCAGCCTGTGACACAACGGCCAAGAAAGAAC TCGAGAAGGTACGCCAGGCCTCTCCTCCTTTCCCTCCTTCCCTTCCTCCT TCCCTCCCTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCTCTC CCTGCCTGCCTGCCTTGCATGTTTTCATCCTCCTGCCGCCCTCGTATGCG TTTTGTTTGGAAGCTGGATCGCAAATGCGTGTGATGATGGAGGTGGAGGG GAAGACAAAGGACTCGTTCCCTCCTTCCTCTTTTGTCTTCTCCCCCTCGA GCGAGCCTGTCTGAGACTTGATGCCCCAAACTTCTCCTTGCCCATGCTGG GAGTGCAATTTGGCAAGCGGGAAGGAATCTGGGCAAGGGCGCTTTAGTGT CCTCCCCTCGCCCTTGACAGCCCATTCTTTCCCCCGTATCTTCCCTCCCC CGAAACCTTTGTCTTCCTCCACGTGTCCGTCGGCTCCATCCCTGGTAACA CACCCTCTTCCTTCCACGCCACCCCCCTCCTCCCTCAGATCATGGGCTCG GTCCCGGAAGATCTGGCCAAGAAGCTCATGGACTGGAAGAAGAGCAAGCA CTGAGGCCTTGACGAGGGACGGGCATATGTCCCTGGGAGGCATGCACCTG CCGGCCGTATAGGCATCCTCAGGGGGGGGGGCTGCCAGTGGGCGCTTGGT GGGATGGTAGGTGTCTGAAGTAGCGGGTGGGAAAGCTCAGGAGGGTCAGG ACTGGAAGTAGGGGAGCGGCCGGGGGAAATGCAGGTGGGCGGGCGGAGGG AGCCGGTGGGGACAAGGGCGGTGTGAAAAAGAAGGGAAGAGGGAGATGCC TGTAGAGTCCTCCGTGTCGTGTGGTCGCAAGGAAGGGGTTTGGAGATCAC GACGACACCCTACCTCCGAGGCGCGGGTGGTGCACATGGTAGGAGTGTAC CGGAGGGGATCGCGGGGAGGGGGGGGGCAAATGTGGAGATGAAAAGGCAT GGGAGGCAGGAAGGGAGGGAGGGAAGGGATGAAATTGGAACATCAGGATG GAAAAGGTTCAAAAACGGAGTGCGATGAAAGCGTATTGGCGAAGAATCGA ACACAGGAGACTCAAACGAGG
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Coding sequence (CDS) from alignment at KK037253.1:253780..256300-

>rna9426 ID=rna9426|Name=rna9426|organism=Nannochloropsis gaditana|type=CDS|length=945bp|location=Sequence derived from alignment at KK037253.1:253780..256300- (Nannochloropsis gaditana)
ATCATGGGCTCGGTCCCGGAAGATCTGGCCAAGAAGCTCATGGACTGGAA
GAAGAGCAAGCACTGACAAGCGGAGGAAAAGATTTTGAAAAAGCTGCTCA
AAAAGCTGAAGGAGGACGAAAAGCCAGCCTGTGACACAACGGCCAAGAAA
GAACTCGAGAAGATGGCCCTCCGTCGTCTGATTTCTTCTTCCTCCGCGTC
CATGCGGCCCACGCTGGCCGCCGCGGTGAACGTGCGCTCTGCCCCCGCTA
TGAGGATGTCTGGGAAGTCATCTTTTGACGATAAGGAGCACGCCATGGAG
GATATGTACATCAGGATCATGGGCTCGGTCCCGGAAGATCTGGCCAAGAA
GCTCATGGACTGGAAGAAGAGCAAGCACTGACAAGCGGAGGAAAAGATTT
TGAAAAAGCTGCTCAAAAAGCTGAAGGAGGACGAAAAGCCAGCCTGTGAC
ACAACGGCCAAGAAAGAACTCGAGAAGATGGCCCTCCGTCGTCTGATTTC
TTCTTCCTCCGCGTCCATGCGGCCCACGCTGGCCGCCGCGGTGAACGTGC
GCTCTGCCCCCGCTATGAGGATGTCTGGGAAGTCATCTTTTGACGATAAG
GAGCACGCCATGGAGGATATGTACATCAGGATCATGGGCTCGGTCCCGGA
AGATCTGGCCAAGAAGCTCATGGACTGGAAGAAGAGCAAGCACTGACAAG
CGGAGGAAAAGATTTTGAAAAAGCTGCTCAAAAAGCTGAAGGAGGACGAA
AAGCCAGCCTGTGACACAACGGCCAAGAAAGAACTCGAGAAGATGGCCCT
CCGTCGTCTGATTTCTTCTTCCTCCGCGTCCATGCGGCCCACGCTGGCCG
CCGCGGTGAACGTGCGCTCTGCCCCCGCTATGAGGATGTCTGGGAAGTCA
TCTTTTGACGATAAGGAGCACGCCATGGAGGATATGTACATCAGG
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Synonyms
Publications