rna9414, rna9414 (mRNA) Nannochloropsis gaditana

Overview
Namerna9414
Unique Namerna9414
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length716
Alignment locationKK037253.1:211190..213259 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101591g1.3611.mrna
Orig protein idgnl|cribi|Naga_101591g1.3611
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:211190..213259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101591g1gene9135Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21289.1cds9384Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9414rna9414-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9414 ID=rna9414|Name=rna9414|organism=Nannochloropsis gaditana|type=mRNA|length=716bp
CGTGCAGGATAATTACCTCCTCTCTACCAGCCCTCCGCCATATATCATCC
AAGCTCGCGCATGTTATAATTGTTCCCGTCTTGCTGACATGTAATGGAAG
GCTAATATGTAAGTCAGGATGACAATTTTTCCTTCGCAGTGTCGTTTTTG
GTTTTTTTTAAATTCCAGACCTTCCTCACCGGTCATGTTTTCCGTCTTAG
AGCTAGCTCTGGCACGAGCCATGGGAGGAATCCTGAAAGCATCTATTACT
GCCTTTTCCTTCCTTTTTCTGTCCTTCCTCCTGCCCTTCCTCCTGCTTGT
CCTTCTCACATCCCTCGGCCGTGCCCGCCTTCCTCCACGTCGTCCTCCTC
ACCCTCCTCGATACCCGCGGGCGAAAGGAAGCCTTTCCCAGAAGGCCACA
CCGCCCTCGACGTGCAATCGGGCCAAGCAAATTCAGAATTTATCACCGCT
TCGGGAATGTTGGGGGCGACGCTGTACCACGCTGTCCGTCTGGGAATCTA
TGATGACGTTGGTCCGCCGGAGAAAGCCACAGCCTAGTATCAGCTGTTGT
TTGAGTTCGCGCATTAAAGAGGGAAGGAGATGAGGAAAGAGCGAGGCAAA
GTGAAGCGGGGTGAGAGGGACGAAAGGGGGAAGTCAATGCCATGTAAAAG
GAGGAGGACCATACGCAAAAGGAAAGACTAAGAGAAAAGATCGGGAAACA
GCCCCCTATGCCTTGC
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protein sequence of rna9414

>rna9414-protein ID=rna9414-protein|Name=rna9414|organism=Nannochloropsis gaditana|type=polypeptide|length=445bp
PLSPRYLHLCVRPMYELETLLRTSLAHSKSITRTLAQIQPLGGGEGGGGG
GRGGGGKLITPMKKVRPYQVKTATDWLQGGPRHEGGRSEEGGREGGGGAR
GEGRGGGGRGRESQAGGGSAPFAPSSPSSFPPSRTSSSFPPPNSVSLASS
LPVPSPSPSFSSPPSSTTPLLPPPLPSPLLDQPSPSLVEAKDEKAPLQHR
SLLPHHLTPLLSSMEAAFFAQHPNLHRYADLALQATVKNARALALARTSP
LSFLPPHDPSSSFPPPHVLSSLRACLRSFYAARLPSCLDAMARPSLPLTL
VHMAATLTVQHAHASAVDPILEEVTSLFQSHHAHTRAHARRSHENAFLSL
SSPSPSLPSSLPPSAPPSLWLRTTQRRLQSLRSMMESAPWLEMSDLVRVL
RKVLAVMEEEGGLEGGEDEEEVEDWMVTSSALVALLVRAGGRCWG
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mRNA from alignment at KK037253.1:211190..213259-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9414 ID=rna9414|Name=rna9414|organism=Nannochloropsis gaditana|type=mRNA|length=2070bp|location=Sequence derived from alignment at KK037253.1:211190..213259- (Nannochloropsis gaditana)
CCCCCTCTCCCCCCGCTACCTCCACCTGTGCGTCCGGCCCATGTACGAGC
TTGAGACGCTCCTCCGTACCTCCCTCGCCCACTCTAAATCCATCACTCGC
ACTCTGGCGCAGATCCAGCCGTTGGGAGGAGGTGAAGGAGGAGGAGGAGG
AGGAAGAGGAGGAGGCGGGAAGCTCATCACTCCCATGAAAAAGGTGCGCC
CATACCAAGTGAAGACAGCCACTGATTGGTTGCAAGGAGGGCCCAGGCAC
GAGGGGGGGAGGAGTGAGGAAGGAGGAAGGGAAGGAGGAGGAGGAGCAAG
AGGAGAAGGAAGGGGAGGGGGAGGAAGAGGGAGGGAAAGCCAAGCAGGAG
GTGGGAGTGCTCCTTTCGCTCCCTCCTCCCCCTCCTCCTTCCCTCCCTCT
CGTACTTCCTCTTCCTTCCCGCCTCCTAACTCAGTTTCACTCGCTTCGAG
CTTGCCCGTTCCTTCTCCCTCCCCTTCCTTCTCTTCCCCTCCCTCCTCCA
CTACCCCCCTCCTCCCTCCACCCTTACCTTCCCCCCTCCTCGACCAACCC
TCCCCCTCCCTGGTGGAGGCGAAGGACGAAAAGGCGCCCCTGCAGCACCG
TAGCCTCCTTCCTCATCACCTGACCCCCCTCCTTAGCTCCATGGAAGCCG
CCTTCTTTGCCCAACACCCGAACCTCCACCGTTACGCCGACCTGGCACTT
CAAGCGACCGTTAAAAATGCCCGGGCCCTCGCCCTTGCCCGCACCTCCCC
CCTCTCCTTCCTGCCTCCTCACGACCCCTCTTCTTCCTTCCCTCCTCCTC
ACGTCCTGTCCTCCCTTCGCGCCTGCTTGCGGTCTTTCTACGCCGCCCGC
CTTCCCTCCTGCTTGGACGCGATGGCCCGTCCCTCCCTCCCCCTCACCCT
CGTCCACATGGCCGCCACCTTAACTGTGCAGCATGCCCATGCGTCCGCCG
TCGACCCCATCCTCGAGGAAGTGACTTCCCTCTTCCAATCTCATCACGCC
CACACCCGGGCCCACGCCCGACGAAGCCACGAAAATGCCTTTCTTTCCCT
CTCCTCCCCTTCGCCCTCCCTCCCGTCCTCCCTCCCTCCCTCGGCCCCGC
CCTCCCTCTGGCTGCGTACGACGCAAAGGAGGCTGCAGTCGTTGCGGAGT
ATGATGGAAAGCGCCCCCTGGCTGGAAATGAGCGACCTGGTTCGGGTGTT
GAGGAAGGTGCTGGCGGTGATGGAGGAGGAAGGGGGTCTGGAGGGAGGCG
AGGACGAGGAGGAGGTGGAGGACTGGATGGTCACATCCAGCGCCCTGGTG
GCCTTGTTGGTGCGAGCGGGGGGGCGTTGCTGGGGATGAGGGAGGAGGGG
AAGGGGAAGGCGATGGGGGAGGAGGAGGAGGGGGAGGAGGAGGGAGGGTG
GAAGGAGCCGACGGAATGTGTGGGTACTGGGACGGATAGGGGATGCCTGG
GCAGGAGGAGGGGCGGGAGGAAGGGAGGGTGATGATGGGGAAGGAAGAGG
GGAAGAGGTGCTTGCTTCTCTCTGTGAGATGCTCTGGCGGTTACCTAGTC
TGTGGGCCCGGCTCATGATTGATAGGGAGGGTGCGATGGGAGGTAAAGCG
GAGGGAAGGCGACGGCGCCTGGTCCAGAGGGAGGTGAGGTTATGGATGGA
GTTAGAGGAGGAAGAGGAGGAGGGAGGAAGGGAGAGCATGGTGGTGCTGA
CGGCCAAGTTGTTGATGATGGGGTGGGAGGGAAAGAGGGAGGAGAAAAGG
AGGAGAAGAGGGGGGAACTTGGAGAAACGACAGGGGGAAGGTGCGGATGG
AGGAGGGATGAGGAAGGAGGAGGAGATGGAGGTGGAGAGGAAGGAAAATA
GGACCTCGAAGAGTCTGCCGCCGACTCGCGCCCTCCTTCCTACCTCCTCC
CCCTTCCTCCCTCCACCTCACCTCATCCCTCCCTCCTGTCCCTCCCACGT
CGCCTCCTGGTGGCTCGCCCTCGTCCGGGCGCGTGTCGTCTGCGTCCCCA
CGGTGGAAGCTGCCTGGTTGCTCCTCCTCGCCTGCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTTGCC
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Coding sequence (CDS) from alignment at KK037253.1:211190..213259-

>rna9414 ID=rna9414|Name=rna9414|organism=Nannochloropsis gaditana|type=CDS|length=1338bp|location=Sequence derived from alignment at KK037253.1:211190..213259- (Nannochloropsis gaditana)
CCCCTCTCCCCCCGCTACCTCCACCTGTGCGTCCGGCCCATGTACGAGCT
TGAGACGCTCCTCCGTACCTCCCTCGCCCACTCTAAATCCATCACTCGCA
CTCTGGCGCAGATCCAGCCGTTGGGAGGAGGTGAAGGAGGAGGAGGAGGA
GGAAGAGGAGGAGGCGGGAAGCTCATCACTCCCATGAAAAAGGTGCGCCC
ATACCAAGTGAAGACAGCCACTGATTGGTTGCAAGGAGGGCCCAGGCACG
AGGGGGGGAGGAGTGAGGAAGGAGGAAGGGAAGGAGGAGGAGGAGCAAGA
GGAGAAGGAAGGGGAGGGGGAGGAAGAGGGAGGGAAAGCCAAGCAGGAGG
TGGGAGTGCTCCTTTCGCTCCCTCCTCCCCCTCCTCCTTCCCTCCCTCTC
GTACTTCCTCTTCCTTCCCGCCTCCTAACTCAGTTTCACTCGCTTCGAGC
TTGCCCGTTCCTTCTCCCTCCCCTTCCTTCTCTTCCCCTCCCTCCTCCAC
TACCCCCCTCCTCCCTCCACCCTTACCTTCCCCCCTCCTCGACCAACCCT
CCCCCTCCCTGGTGGAGGCGAAGGACGAAAAGGCGCCCCTGCAGCACCGT
AGCCTCCTTCCTCATCACCTGACCCCCCTCCTTAGCTCCATGGAAGCCGC
CTTCTTTGCCCAACACCCGAACCTCCACCGTTACGCCGACCTGGCACTTC
AAGCGACCGTTAAAAATGCCCGGGCCCTCGCCCTTGCCCGCACCTCCCCC
CTCTCCTTCCTGCCTCCTCACGACCCCTCTTCTTCCTTCCCTCCTCCTCA
CGTCCTGTCCTCCCTTCGCGCCTGCTTGCGGTCTTTCTACGCCGCCCGCC
TTCCCTCCTGCTTGGACGCGATGGCCCGTCCCTCCCTCCCCCTCACCCTC
GTCCACATGGCCGCCACCTTAACTGTGCAGCATGCCCATGCGTCCGCCGT
CGACCCCATCCTCGAGGAAGTGACTTCCCTCTTCCAATCTCATCACGCCC
ACACCCGGGCCCACGCCCGACGAAGCCACGAAAATGCCTTTCTTTCCCTC
TCCTCCCCTTCGCCCTCCCTCCCGTCCTCCCTCCCTCCCTCGGCCCCGCC
CTCCCTCTGGCTGCGTACGACGCAAAGGAGGCTGCAGTCGTTGCGGAGTA
TGATGGAAAGCGCCCCCTGGCTGGAAATGAGCGACCTGGTTCGGGTGTTG
AGGAAGGTGCTGGCGGTGATGGAGGAGGAAGGGGGTCTGGAGGGAGGCGA
GGACGAGGAGGAGGTGGAGGACTGGATGGTCACATCCAGCGCCCTGGTGG
CCTTGTTGGTGCGAGCGGGGGGGCGTTGCTGGGGATGA
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Synonyms
Publications