rna9412, rna9412 (mRNA) Nannochloropsis gaditana

Overview
Namerna9412
Unique Namerna9412
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length363
Alignment locationKK037253.1:207728..209059 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101088g1.7163.mrna
Orig protein idgnl|cribi|Naga_101088g1.7163
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:207728..209059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101088g1gene9133Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21290.1cds9382Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9412rna9412-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9412 ID=rna9412|Name=rna9412|organism=Nannochloropsis gaditana|type=mRNA|length=363bp
ATGACGACGCATTGCACGCCCGCCCCCCGCACGGCTCACTTGCCCCTCCC
TCCTTTCCTTCTCCTCCCCCGCTTTTCCCTCCCCTCCTCGTCTTCAGGAG
GGTGGGGTGCTGACAGAGGCGGTGCGACGGCAGCCCTATCAGGTCCTCCT
CTTGGACGAGTTCGAGAAAGCGCACCGAGAGACTCGCAGGGCCGAACGGT
CGACTTCCGCAACACCATCATCATTATGACCAGCAACCTTGGGGCCCAGT
ACCTGAGCGAGCTGCCCCCGGACAAGCCCTCTTCAGCGGCCAGGGAGGAC
GTGATGCGGGTAGTACGGGCGGCGCTCCCGCCGGAATTCATCAACCGGTA
CGGGGCACCTTAA
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protein sequence of rna9412

>rna9412-protein ID=rna9412-protein|Name=rna9412|organism=Nannochloropsis gaditana|type=polypeptide|length=274bp
MALPRRRRDGRAVDLPIRPCLGRPEFLLLADRGPRVRTLGPWLEAGVGTG
PKRLQRPGLGLGRPRHCRGLGGFPSPSLAFPFLHRPGTGDRTPEYLPSFL
PRFLAPFFLPSLPLGTRPESPGSGARPPSTLQRPGRGPGPGLGVFRGGTR
PSPLGLFPFLPGRSPPPGRAGLLLQAGADPGGGHMGRLRLSDGSSFPVCL
QGHGRADHVRGLPGAAGEGGREGEREGGREGRREEGRKEGRKGGREGSTA
FPARVLVGPMLNSPPPSCPLSHEI
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mRNA from alignment at KK037253.1:207728..209059-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9412 ID=rna9412|Name=rna9412|organism=Nannochloropsis gaditana|type=mRNA|length=1332bp|location=Sequence derived from alignment at KK037253.1:207728..209059- (Nannochloropsis gaditana)
GGCTTTTGATCAACTAAGAGCAAGACTTAGGGAGAGAACGGCATCGTATC
GTTCCTTTTCGTGCAAATTGTCATCAATCTACCCCTCCGTACTCTCCATA
GGGAAAAGACGCCGCCACAGGACGGATCAAATAATCTGTATACCACAGGC
ATATGACCACAGAGGACGATGTCCCCGCCCCATTCACGGTAAAGTTGTCA
GCATTGCGCATTCGAGCCCTGGATGCAGTACTGCCTACAGGGCCTTCCGC
TCATTTCTACCTCTTTGCCCTCCCCTCCCCTCCCACCTTCCTGCGGCAGT
GCTCCTGCCCCACCGGACTTAAGCTTTTCCTTCCGAATTCTTTTCTCCCT
TTCCCTTCCCCCTACAGCCCCTTAACTCCGTCCGCGCGTCCACCGCCCGG
GTCGTGCGCCGAGCCCAGCACGTGCACATCGACTCAGCCGCCCTCGCTGC
CCTCACCCGCAGCCTGACCACGCGCGAAACCCAACCACTGGCGTGGCAAG
AGCTTGGATGGCACTACCACGCCGACGCCGAGACGGCCGGGCCGTTGACC
TGCCAATACGTCCTTGTCTTGGACGCCCTGAATTTTTGCTTCTGGCCGAC
CGCGGGCCTCGAGTACGAACACTTGGCCCGTGGCTTGAGGCGGGCGTTGG
AACGGGACCCAAACGCCTTCAACGCCCAGGCCTTGGCCTCGGTCGCCCCC
GCCACTGTCGCGGGCTGGGTGGATTTCCCTCCCCCTCCCTCGCCTTCCCC
TTCCTCCACCGGCCCGGGACCGGCGACCGGACCCCGGAGTACCTCCCCTC
CTTCCTCCCCCGCTTCCTCGCCCCCTTCTTCCTTCCTTCCCTGCCTCTCG
GAACGCGTCCGGAAAGTCCGGGAAGTGGGGCACGTCCTCCTTCAACACTT
CAACGGCCAGGCCGCGGACCTGGTCCGGGCCTCGGGGTTTTCCGCGGTGG
AACTCGTCCGTCTCCTCTCGGCCTTTTTCCCTTCCTTCCGGGACGAAGCC
CTCCACCAGGGCGAGCAGGTCTACTTCTACAAGCGGGCGCAGATCCTGGT
GGCGGACATATGGGCCGCCTACGGCTGTCGGACGGATCCTCCTTTCCCGT
ATGCCTTCAGGGACATGGGCGAGCTGACCATGTTCGCGGACTACCGGGTG
CCGCAGGTGAGGGGGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGA
AGAAGGGAGGAAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGGGTTC
CACAGCTTTTCCCGCGAGGGTACTGGTCGGGCCGATGCTCAATTCCCCCC
CGCCTTCCTGTCCTCTTTCCCATGAAATTTAA
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Coding sequence (CDS) from alignment at KK037253.1:207728..209059-

>rna9412 ID=rna9412|Name=rna9412|organism=Nannochloropsis gaditana|type=CDS|length=825bp|location=Sequence derived from alignment at KK037253.1:207728..209059- (Nannochloropsis gaditana)
ATGGCACTACCACGCCGACGCCGAGACGGCCGGGCCGTTGACCTGCCAAT
ACGTCCTTGTCTTGGACGCCCTGAATTTTTGCTTCTGGCCGACCGCGGGC
CTCGAGTACGAACACTTGGCCCGTGGCTTGAGGCGGGCGTTGGAACGGGA
CCCAAACGCCTTCAACGCCCAGGCCTTGGCCTCGGTCGCCCCCGCCACTG
TCGCGGGCTGGGTGGATTTCCCTCCCCCTCCCTCGCCTTCCCCTTCCTCC
ACCGGCCCGGGACCGGCGACCGGACCCCGGAGTACCTCCCCTCCTTCCTC
CCCCGCTTCCTCGCCCCCTTCTTCCTTCCTTCCCTGCCTCTCGGAACGCG
TCCGGAAAGTCCGGGAAGTGGGGCACGTCCTCCTTCAACACTTCAACGGC
CAGGCCGCGGACCTGGTCCGGGCCTCGGGGTTTTCCGCGGTGGAACTCGT
CCGTCTCCTCTCGGCCTTTTTCCCTTCCTTCCGGGACGAAGCCCTCCACC
AGGGCGAGCAGGTCTACTTCTACAAGCGGGCGCAGATCCTGGTGGCGGAC
ATATGGGCCGCCTACGGCTGTCGGACGGATCCTCCTTTCCCGTATGCCTT
CAGGGACATGGGCGAGCTGACCATGTTCGCGGACTACCGGGTGCCGCAGG
TGAGGGGGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAAGAAGGG
AGGAAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGGAGGGTTCCACAGCT
TTTCCCGCGAGGGTACTGGTCGGGCCGATGCTCAATTCCCCCCCGCCTTC
CTGTCCTCTTTCCCATGAAATTTAA
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Synonyms
Publications