|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100022g57.840.mrna |
| Orig protein id | gnl|cribi|Naga_100022g57.840 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:784294..785656 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna941 ID=rna941|Name=rna941|organism=Nannochloropsis gaditana|type=mRNA|length=2558bp
CCTTTTTGCTTCACGCGACTTCCGTGACATTCACCGAGATTTACTCTCTA
CGCATTCTATGCCCTTATGCCCCTCTACCTGTTGGGTCACTTATTATGAA
GCTTTGTTCGTGTCCGTAGAGCGTCGAGGCTGCGCGTGGTGCTCAAGTCT
CACCATCCGGCAGCGCCGTCCTCGTTCGGGAGCTCTCCAGGTCTCCGGCC
CCACCCACCTCGCCTCAGCTTCTCGCTTAGCTCTCTGTCGTAATCCGGCG
TGACGCGCTCCCTCAATCTCTCCCCAATCTTATTGCTCAACACGTATTCG
CTTGAAGCCATGTCAAATTGAGAAGATATCGGAAAGAAAAATTTCATTCA
AGTGTCACGCCTGCATGGAGTCACTCATAAGCTCTCGTTCAGAGCAGAGG
AAATGCCGGAATTTCCACCGCCAAGCATCTGAAGTCGCTTACAAAGAGGC
GGTGCCATTTTTTAGACAAGATGCTGCAGTCGCCTTCGCGAGGGCCGCGT
GATGCATGGGACGGACAAGTTGAGAGTTCGAAAACAGTAAGCGTGGGGAG
CGTCGCGGGGGCGCAAACAGCGGAGGAAGTCATCTCTGTGTTATTCAGGC
CACCAGCGCGATGCACACGAGGAACAGCTCACTGACTATATGGCGTAGAA
GGTTTTCTAACTAGGAGCTTCGTCAATGCTGGAATCTTGCTATGTTGCTT
GTCACATTGTCTTGTGTAGCCTGCTACATGGCGACGCTCGCTTCCAGAGT
GGGTGGCAAGCTACCTTGCTCTACCTCAGTACACGCTTGCTGTATCACCT
TCCTGCTCTCCGTGATCTGATCCTCCATGTATATTGTACGCATGAAAGCA
TGTGTCTGTGTAACTTGTCATCCATGCGATACGGGAGTTTGCGTTTGTTT
CACTTTTCACTGTTATTGCATGGATACGCGAAGAGATCTGGTTAGGTAGG
GGGGATGCACGGTGTTCAAGGTCGCGTGCATATTCTTGGCTCAAAGAAAC
TCGAATTTCAACTCGTCTAGTGTAGCTTTGTTTTTGGCTTGACGAACAAT
AGCAATTCATGTGGAGTCGCCTCTATTATGGCTCTTCCTGCGCAAAGGAA
AGCCATTAGCTGCAGGGGGTGGGGGGCAAATCTCACTTCACGCGAGCCAA
CGAACACCTGTGACACTCTAACCACAGGCTACGCGCCCTGCTTATTGAGA
AAGGATGCTACAGCTTACCCTCTGAGAAGACGCGTGTGAGGGGCTCACAC
ATTCGTCGACTTGCGGAATCTCTCCGCTGGGCTACGCTCTCACGCCTTAG
AATCGCCTCGCGGGGTTACGCGAGAACGATGGATAGATTCACCAATATTC
AGCAAATTGGTGAGGGCACTTATGGAATAGTTTACAAGGGGTATATGAAA
GGACCGGGGTCAGCGACTACGTCATCAAATGGAGAATTGATAGCGCTGAA
GCAGATCCGCCTTGCCGACGAGGATGAAGGCGTACCGTCCACGGCCATAC
GAGAAATCTCTCTGCTCAAAGAGTTGTCTCACCCAAATGTAGTTACTCTA
AAGGATGTTATTTACGCGGACAACCGTCTTTATCTTGTTTTTGAGTACCT
TGATCAGGACTTAAAGCGATACATGGACGGGTGCAAGACAGGGTTGGACT
CAACCTTGGTAAAGTCGTATCTCCATCAGATGATTCAAGGAGTGGCCTTC
TGCCATTCCCACCGGGTCCTGCACCGAGACTTGAAGCCTCAGAACCTTCT
TATCGACAGGCAAGGCCGCCTCAAACTTGCGGACTTTGGCTTGGCTCGCG
CCTTTAATGTGCCGTTGCGACAATACACGAGAGAGGTTGTTACCCTCTGG
TATCGAGCACCCGAGATTTTGCTGGGCGCAGAGCATTATTCAACACCAGT
GGACACCTGGTCGATAGGCTGCATATTTGCAGAAATGTTGAACAAAGAAC
CACTTTTTCCGGGAGACTCAGAAATCGATGAACTTTTTCGCATTTTCAGG
GTCTTGGGAACGCCAAACGACGAGATTTGGCCCAAAGTTACGGAGCTACC
CAACTATAAAACACAGTTTCCCAAGTGGAAACGGCAGTCGCTTGACAGAA
ACGTATCCCGGCTTTGCGCTGACGGGCTTGATCTCCTCTCGGTATGTGCG
ACGAGTAAGAAGCTCTCATGGCGGGCGAAGGAAGTTGTCATTAACACCTT
GCCTCATTTTTTCCTATCATACCTGCCCAAGCGCTTGCTGACGTACGAGC
CGACAGCTCGCATAACTTGCAGGGAGGCACAAGATCATGCATACTTCGCG
GGTTTGGGGGCTTGCAAAGACCGAATGGTTTGAAAAGTAAGAGAAACTTT
CACTGCAATAAAAAGCTTTGAATGTATTACATAATCTGGAAAGCTTCGGA
GATAAGTTTTTATGTCATCACTTACTTTATAAAACTTAATGCATAACATT
TTGTTCTTTCGCGCAAAATGTCTGCTCTGCTCGACACCATAAGTTCGACT
AGTTCTCATATGATCGCTCTCGCCAATCCAATGGTGGCAGAGACAGCAGA
GAATATGA back to topprotein sequence of rna941 >rna941-protein ID=rna941-protein|Name=rna941|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
MSNRAVRCLINCAFPCVSHASGRIGQPYDTWTLCYLKIPLMVRDRQMVDS
LRLRRLCATSCNFYSSFSCGPRMLANHPQLCSRLPTVCLTRVQLRFSVHS
MGHGVINKRSRAKLKKENIFHT back to topmRNA from alignment at CM002456.1:784294..785656- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna941 ID=rna941|Name=rna941|organism=Nannochloropsis gaditana|type=mRNA|length=1363bp|location=Sequence derived from alignment at CM002456.1:784294..785656- (Nannochloropsis gaditana)
CGCTGGGGGACGGCCATACTCGAAGTGCTCTTGTGTACAGTGACCAGAAA
TGTGTTCAACTGGCCTATAGGACACAGCAATTACATGACATCTATGCACT
GGCCAATGATTATTTCTCCCCTCCTTGCACGCAACCTTGTCCGTCTTCTC
GCTTCGCTTCGGCTAGCCTATGGTTCCACACTCCGGTTCTCACTCTCCGC
CACGTGCTACGTACTATCATGTCAAATAGAGCAGTACGTTGCCTAATCAA
TTGTGCTTTTCCTTGCGTATCTCATGCGAGCGGTCGCATCGGTCAGCCAT
ATGACACATGGACGCTTTGCTATTTAAAAATCCCTCTTATGGTTCGGGAC
AGGCAAATGGTTGATTCCCTTCGGCTAAGGAGGCTATGTGCTACGTCATG
CAACTTCTACTCGTCCTTTTCCTGTGGGCCTCGCATGCTCGCAAACCATC
CCCAACTTTGCTCGAGGCTGCCCACAGTTTGCCTAACTCGCGTCCAGCTA
CGCTTCAGTGTCCACTCCATGGGACACGGGGTCATTAACAAAAGATCGAG
AGCGAAGTTGAAGAAGGAAAACATTTTTCACACTTGACATTGTCTCATTG
GTTGTTGAATGACGACCCGCATCGCGTGCAACAAGACCCCTTTCCCACAT
AGAAGAAGAGCGTAGGTACGAACATGTCTTCAAAGGACGTACTGTACGGT
CATAAATGTATTCCGAGGCGCCGAGCCATTAGACTGCATCATTTTATGTC
CACAAACCTTTGTATTAATGTTGAGGGTTTCTAACAACGACCAGGTCGAT
TTATGAGTAATGTAGACGATACCGAGAAGGACGCGTCCTCCTGGAAGGGT
ATTCGGAGGAGTATCGGTACGGACAGCAGCAGCGTGGCCGATAAAGACGA
TTGCCTCAAGTAAGTCGCTGCTTCTTAGATACTGTAGAAGGAGGCGCGGC
ACTTTCATTTGGACCTACTATTGCGCAAATTCTAATGGCGTGCGGGTGTC
ACACCTGTTGAAGTTCCTTCTTGATAAAGACCAAAACAACTTGTTCAAGG
TTGCAGCGTTGCTGCACATTTTTCACACATTTGTAGGTGCAAAGTGGTGG
GCAGCGCGACTTTTTTTGCTGTATCTATTTACACATGGAGTCAAGGGGCG
TCGTTACCCCCGGTCAACTCGAATAGACGTTTTCTATTCATATTCTCTGC
TGTCTCTGCCACCATTGGATTGGCGAGAGCGATCATATGAGAACTAGTCG
AACTTATGGTGTCGAGCAGAGCAGACATTTTGCGCGAAAGAACAAAATGT
TATGCATTAAGTTTTATAAAGTAAGTGATGACATAAAAACTTATCTCCGA
AGCTTTCCAGATT back to topCoding sequence (CDS) from alignment at CM002456.1:784294..785656- >rna941 ID=rna941|Name=rna941|organism=Nannochloropsis gaditana|type=CDS|length=369bp|location=Sequence derived from alignment at CM002456.1:784294..785656- (Nannochloropsis gaditana)
ATGTCAAATAGAGCAGTACGTTGCCTAATCAATTGTGCTTTTCCTTGCGT
ATCTCATGCGAGCGGTCGCATCGGTCAGCCATATGACACATGGACGCTTT
GCTATTTAAAAATCCCTCTTATGGTTCGGGACAGGCAAATGGTTGATTCC
CTTCGGCTAAGGAGGCTATGTGCTACGTCATGCAACTTCTACTCGTCCTT
TTCCTGTGGGCCTCGCATGCTCGCAAACCATCCCCAACTTTGCTCGAGGC
TGCCCACAGTTTGCCTAACTCGCGTCCAGCTACGCTTCAGTGTCCACTCC
ATGGGACACGGGGTCATTAACAAAAGATCGAGAGCGAAGTTGAAGAAGGA
AAACATTTTTCACACTTGA back to top
|